Esil016164.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000074.1:7059504-7069998[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-72 7.7e-68 229.2 17.4 1 270 120 377 120 400 0.87 2 2 2 2.2e+04 -7.6 16.4 1 48 397 443 397 471 0.54
Sequence Information
- Coding Sequence
- ATGGGACTTCGTTCAGTAATGGCTACACCCGATAATAGTGACGAGGAGAGTGGAGATGCCTTTACTGACGGCGACTTTGAGGATTCCGATGATGAAACTGTTCTAGAACGTGATGAAAATCAACCTTCCAACATCTCTGTCAACGAAACTGTTAATGAAGAAGTTCAAAAAAAGTTGACCAACGGGAATTCTAGTAATGGACATAAGGAACCTTTCGAAGAACTAAAAGTTAATGGACGTGACCAGCAAGCAAGTGATTTGGAAAATTGTAGTGACATTGCATCGGATTTACGACGAGATTCACACGGGGATCAAAATCCTTCGATTGTTGGAATTATCGGAGATCAACACAGCCATGCAGAACAGAGGCTGGCTGCACGGCGGGCCGCGCGAGCTGAAGCCCGAGAGATCCGCATGAGGGAGCTGGAGAGACAACAGCGAGAACAAGAAGACCATGCGGACAAGGCGTATGATATGTACGCTGAGACAGTTGGCAGACGAGGCCCGCGACTGGCGTCCCTCAGTCCGGCCGCGGTGCTCTCGCCGCGCCGGAGTTCGGAAGATTCAGCGGATGACACCTTTAGTATCAAAGATTTGAGACATGAACTGAAGGAGTTTGAAGAGAAGTTCCGCAAGGCGATGATTCTGAACGCGCAGCTCGATAACGACAAGGCGTCGCTCGGCTACCAGCTCGAACTGCTCAAGGACAGGATCGACGAGTTGCAGGAGGAATTCGCACAACTACAGCGCGAGCACCGCGAGAAATGTTCGGTGCACGAGCGGCTGAAGCGCGAGCACGTGTGCGTGGAGCGCGAGCTGTGCGCGGCGCGGGACGCCGTGCGTGCGCGCGACGCGGCCGCCGCCGCCGCGGGCTTCGTGTTCGCGGAGGCCGCGCCCGGGGCCGCCGCGCCCGGCTTCGGCGCCGTGCCGCCGCTCGCGCTGCTCTCGCACACCGCCGACCAGATGCTGGGAGAGCCGGAGGCCACGCTAGACGTGCGGTTGCAAAACTTGGTGACCTCGAAACAGTCCCTAGAGTCGGAGGTGCGCAAACTGAAACTCACGTTGAACGAGGAACGCGCCGCCAGACAAAATGGAGTCGCGAATCATCACGACGACCAGTATGAGAACGAATTGGAGAGTGTCCGCAAGGCGTGTGCGGAGGCGAAGGGCCGCGCGGCGCGCGCCGAGGCGGAGGCGGCGCTGCAGGCGGCCGCGAGCGCGCGCCTCGAGGCGCAGCTACAGCGCATGCGCGCCAGGCACGACGAGCACGACGAGCTCGAGGAACAACTCAAGCAGGACCGCAGGAAACTGCAGCGAGAGGCGCGAGAGGCTCTAAACCGTGTTGAAGAACTGGAGACAGAAAATAGCCACCTCACCAAGAGACTCGATAAATTGAAGAACGCTAAATCAGCACTACTCAAGGACCTGTGA
- Protein Sequence
- MGLRSVMATPDNSDEESGDAFTDGDFEDSDDETVLERDENQPSNISVNETVNEEVQKKLTNGNSSNGHKEPFEELKVNGRDQQASDLENCSDIASDLRRDSHGDQNPSIVGIIGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLASLSPAAVLSPRRSSEDSADDTFSIKDLRHELKEFEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEEFAQLQREHREKCSVHERLKREHVCVERELCAARDAVRARDAAAAAAGFVFAEAAPGAAAPGFGAVPPLALLSHTADQMLGEPEATLDVRLQNLVTSKQSLESEVRKLKLTLNEERAARQNGVANHHDDQYENELESVRKACAEAKGRAARAEAEAALQAAASARLEAQLQRMRARHDEHDELEEQLKQDRRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00909728;
- 90% Identity
- iTF_00737498;
- 80% Identity
- -