Basic Information

Insect: Galerucella nymphaeae
Gene Symbol: Zfy2
Assembly: GCA_963978555.1
Location: OZ021710.1:20117994-20120012[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0026 0.4 12.4 1.4 1 23 114 136 114 136 0.98

2 16 2.7 4.2e+02 2.9 0.8 2 23 142 163 142 163 0.90

3 16 0.00013 0.021 16.4 5.6 1 21 169 189 169 191 0.95

4 16 9.5e-07 0.00015 23.2 2.2 1 23 197 219 197 219 0.97

5 16 0.066 10 8.0 2.1 1 23 227 249 227 249 0.97

6 16 7e-05 0.011 17.3 0.4 2 23 256 277 255 277 0.97

7 16 0.00096 0.15 13.7 0.4 1 23 282 305 282 305 0.97

8 16 0.014 2.2 10.0 7.5 2 23 309 330 308 330 0.96

9 16 2.3e-05 0.0035 18.9 1.0 1 23 336 359 336 359 0.96

10 16 1.1e-07 1.7e-05 26.2 0.2 2 23 367 388 367 388 0.98

11 16 2.7e-09 4.1e-07 31.2 1.3 1 23 392 414 392 414 0.99

12 16 2.9e-06 0.00045 21.7 1.5 1 23 420 442 420 442 0.99

13 16 0.00042 0.064 14.9 2.4 1 23 448 470 448 470 0.97

14 16 6.3e-05 0.0097 17.5 1.7 1 23 476 498 476 498 0.98

15 16 0.00023 0.036 15.7 5.0 1 23 504 528 504 528 0.92

16 16 0.0028 0.43 12.3 0.5 1 21 535 555 535 558 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0026	0.4	12.4	1.4	1	23	114	136	114	136	0.98
2	16	2.7	4.2e+02	2.9	0.8	2	23	142	163	142	163	0.90
3	16	0.00013	0.021	16.4	5.6	1	21	169	189	169	191	0.95
4	16	9.5e-07	0.00015	23.2	2.2	1	23	197	219	197	219	0.97
5	16	0.066	10	8.0	2.1	1	23	227	249	227	249	0.97
6	16	7e-05	0.011	17.3	0.4	2	23	256	277	255	277	0.97
7	16	0.00096	0.15	13.7	0.4	1	23	282	305	282	305	0.97
8	16	0.014	2.2	10.0	7.5	2	23	309	330	308	330	0.96
9	16	2.3e-05	0.0035	18.9	1.0	1	23	336	359	336	359	0.96
10	16	1.1e-07	1.7e-05	26.2	0.2	2	23	367	388	367	388	0.98
11	16	2.7e-09	4.1e-07	31.2	1.3	1	23	392	414	392	414	0.99
12	16	2.9e-06	0.00045	21.7	1.5	1	23	420	442	420	442	0.99
13	16	0.00042	0.064	14.9	2.4	1	23	448	470	448	470	0.97
14	16	6.3e-05	0.0097	17.5	1.7	1	23	476	498	476	498	0.98
15	16	0.00023	0.036	15.7	5.0	1	23	504	528	504	528	0.92
16	16	0.0028	0.43	12.3	0.5	1	21	535	555	535	558	0.87

Sequence Information

Coding Sequence: ATGATGCCAATACAAATAAAATCGGAAACAAACAATGAACATGAAGCTAACATCAAAACAGAACCTGCCATAAAAGATAATTCCaaagctgaggataattctaaCGTTGATTTAcctattttaaatgtaaaaatagaACCACCAGAATGTTCTACAAGtgagaaagtaataaaaatagaaataaaaccAGAATTGCCACTAGATTTTGAACCGAACCAGTCTGATTTAGATCCATGTAAAAATATTGTAGATATTCacgaagaaaatttaaatataactttTGAAGAACTGAAAGCATTAAACGACGATTTAACTATTGTTGAAAATGAAACCACTGTCTACAAGTGTCAAATATGTGAAATAGTCTTCATCAAGTATCAGGAATATAGGttacacaaaaaaaatcattatattGAGAAAAGAAGGTGTTATATTTGCCACAAAGTTCAACAGAGTCTTGGTGTATTAGAAGAACATGTAAATAAGCATCTTGGTCTCAAACCTTACAAATGCGAAGAATGTGACAAGAGTTTCGCTTCAAAAAACCATCTAAGTTTACATAAAAGATGCCATAATACTAGTGAGATTTATAAATGTACTAAATGTGGTAAAGAATTCAGGACAAGTGCTTCTTTACGCAGTCATCGCTTTGTACATTAtgaaaaaatagttgaaaatttcaaatgcaAAGTTTGTGGTCATAGCTCTGTAGATGAAGCTAAGCACAAAGTCCATATGTCAATACATGCGAAAAAAGCAGAAATTAGATGTGAATTATGTAAGAAAGCTTTCAATACTGAACGTGGCTTAGAAAGTCATCTAAGTACTCATAACGAACTGCAATTTCCTTGCGAATTTTGTGGTAaaatttatccttcaatgtaTAGAATAAAAAGACACATCAAAAGAGCCCATGCGCCCTGTAAATGTGAACACTGTGACCAGATTTTTCATGATCGTTTTCTTTATAATAAGCATATAAAAGAACACACCCAGCAAACCAAATATGAATGCGAATACTGCCAAAAAGTTTTCGAAAAAGCCAAAAATCTTTCCGAACACTTTCGTCTCCAGCACAAACAAGACGGAGAGAAAAGAAAATGTCCCATTTGCGGCAAAGAATTCATCAACAACGCACTGTTAAAAAACCACATCAAAACACACGACAAATGCTTCAAATGTAAAATTTGCGATAAAGTTTTTTCTTCAAGGTATAATCTAGAAATCCACATGAATACTCATTCTGGCGCTAAGAATTTCAAATGTGAAATATGCGGTAATCATTTCGCCAGCAAAACTAGTCTGAAAAATCACATCGCTACTCATTCGGACGAAAGAAAATTCCAATGCGAAATTTGCGCCAAGACATTTAAAACTTCCAGAAGACTCTATACCCATAGTCAAAGTCACTCTACTGAAGAAAAGTACCAGTGTGAAATATGTCTACAGAAATTTAGGGTCAAACAATACTTGAAAGCTCACATGTACAGACATTCTAAAGTAAAACCGTTTTCTTGTGACGTTTGCAAAAAGCGGTTCAAACATAAAAAAACGAAAGAAAAACACATGCGAATCGGAAAACACCAACACGTGTCCGAAGAACACGATTGCGATTTTTGCGACGAAAATTTCTCTACGAGAGATTTGCTGTTGGATCATTTTGCTGCAGTTCATCACAATGAAAATGTCGTTAACGAGTGTGAGAAAGATATCGAAGAAGATGAAGACGATAAGGAATTGGATAATGTTGCGAATGGCGATGAAGTGGATGAAAAAGTAGATAGTAtggaataa
Protein Sequence: MMPIQIKSETNNEHEANIKTEPAIKDNSKAEDNSNVDLPILNVKIEPPECSTSEKVIKIEIKPELPLDFEPNQSDLDPCKNIVDIHEENLNITFEELKALNDDLTIVENETTVYKCQICEIVFIKYQEYRLHKKNHYIEKRRCYICHKVQQSLGVLEEHVNKHLGLKPYKCEECDKSFASKNHLSLHKRCHNTSEIYKCTKCGKEFRTSASLRSHRFVHYEKIVENFKCKVCGHSSVDEAKHKVHMSIHAKKAEIRCELCKKAFNTERGLESHLSTHNELQFPCEFCGKIYPSMYRIKRHIKRAHAPCKCEHCDQIFHDRFLYNKHIKEHTQQTKYECEYCQKVFEKAKNLSEHFRLQHKQDGEKRKCPICGKEFINNALLKNHIKTHDKCFKCKICDKVFSSRYNLEIHMNTHSGAKNFKCEICGNHFASKTSLKNHIATHSDERKFQCEICAKTFKTSRRLYTHSQSHSTEEKYQCEICLQKFRVKQYLKAHMYRHSKVKPFSCDVCKKRFKHKKTKEKHMRIGKHQHVSEEHDCDFCDENFSTRDLLLDHFAAVHHNENVVNECEKDIEEDEDDKELDNVANGDEVDEKVDSME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00911300; iTF_00912437; iTF_01106609; iTF_00459163;
90% Identity: iTF_00911300; iTF_00912437;
80% Identity: -