Basic Information

Insect: Frankliniella fusca
Gene Symbol: ct
Assembly: GCA_029379305.1
Location: JAHWGI010000969.1:1087953-1099291[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.1e-27 8.5e-24 84.1 0.0 3 72 83 153 81 158 0.94

2 3 2.8e-32 2.2e-28 98.9 0.0 2 77 549 625 548 627 0.96

3 3 5.4e-31 4.3e-27 94.7 0.0 4 75 794 866 792 870 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.1e-27	8.5e-24	84.1	3	72	83	153	81	158	0.94
2	3	2.8e-32	2.2e-28	98.9	2	77	549	625	548	627	0.96
3	3	5.4e-31	4.3e-27	94.7	4	75	794	866	792	870	0.95

Sequence Information

Coding Sequence: ATGGGGCCcgtgccgcccggcctgcccggccaccACCTCAGCAACCTGCTGCGCGAGTCGGACGCCCTCAAGAGCACCTTCCGCTTCGACGAGCAGCGGTCGCCGTACCGCTTCTCCGAGGACCGCAGCCTCACCCCGAACGGCGTCATGATGGGCCGGCTCGGGGAGTCGCTCATCCCCAAGGGTGACCCCATGGAGGCGCGCCTGCAAGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGAACCTCGACACGCTCAACATCGCGCGACGGGTCCGCGAGCTGCTGTCGATCCACAACATTGGCCAGCGGCTGTTCGCCAAGTACGTGCTGGGGCTGTCGCAAGGCACCGTCAGCGAGCTGCTGTCCAAGCCCAAGCCCTGGGACAAGCTGACGGAGAAGGGCCGCGACTCGTACCGCAAGATGCACGCGTGGGCCTGCGACGAGCACTCCGTCATGCTGCTCAAGTCGCTCATCCCCAAGAAGGGCAAGGAGGCCAGCCTGCCGCCCTTCATCGCCAGCGAGACCCCCGACATCGTGGACGAGAGGCTGGCGCACATCCTGAGCGAGGCGTCGCAGCTGATGCGCGCGCACAACCCCGACGACCTGCGCTCCAATGAGGACTCGAGGTCGCCGGCCGACAACCGAGGCGAGAGCGCGTCCCCGATGAACTCAAAGGACGGCTCGCCGAGCCGGAAGGTGCGCAAGTATGAGAACGACGACATCCCGCAGGAGAAGGTGGTCCGGATCTACCAGGAGGAGCTGGCCAAGATCATGGGCCGGCGCCTGGAGGAGAGCatgcgcggcagcgcggcgggcgcccgcggccccggcgaccAGCAGCCGCCGCCCTTCCCGGGCCTGCTCTTTCCGCACTTCatggagggcgcgggcgggctgccgctggcggcgcgctCCCAGGACGACATCCGCCTCGCGCTCGACACGTACCACCGCGAGCTCGCCAAGCTCAACATGGCCCCCGCCATGGagggcctcaccccgcccgtcggcctgcccggcctcctcgccctgcagcagcaggcgctggcgcagcaggcgcacgcCATGcagcagcaacagcagcagcaacagcagcaacagcagcagcagcaacaacaacagcagcagcagcagcaacaggagccCCGTCAGAACGGTGAAGCACAGGATCTTTCTCTGCCCAAGGAGAGGAAGTCGGAGAGCCGCGACGGCCGAGACCGGGAGCTGAACGGCgtcgagcgggagcgggagcggggctccGACGGcgaccgcagcgcgccggccgaggccagcagcgcgagcgtcgagcgggccgagcgcgccgagcggcTCAAGAAGGAGATGGCGGAGGCGACGGCCGAGGCCCTGAGGCACGGCACCAGCGCCTTCTCCCTCGTCAGGCCCAAGGACGCCCCCGGCGCCCCGACGGCCTCCCCCCTCAGCAACTCCATCCTGCCGCCCGACCAGGCCGGCGCagacctctccggaaccgcggCCGTGTCGCCGCTGCAGAGGATGGCTTCCATCACCAACAGCCTCATCTCGCAGCAGGCGTCCGCGCCCTCGCACACCACCCCGAACCCCAGGCCGCTCAAGGCCGTCCTCCCCCCAATCACTCAGCAGCAGTTCGACCAGTACAACAACCTCAACACCGAGGAGATCGTGCGCAAGGTCAAGGAGGCCCTGTCGCAGTACTCCATCAGCCAACGGCTGTTCGGCGAGAACGTCCTGGGCCTGTCGCAGGGCTCCGTGTCGGACCTGCTGGCGCGGCCCAAGCCCTGGCACATGCTGACGCAGAAGGGCCGCGAGCCCTTCATCCGCATGAAGATGTTCCTGGAGGACGACAACGCGGTGCACAAGCTGGTCGCCTCGCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACCGGCGGCTACGGCGTCAATCCACCGATCCCCTCGTCGCGGTCGCACCCCgcggcctcgcgcctcgccaaCCTGCCGGAGGACATGCTGAGCCGGCTCAGCGACCAGCACGCGCACTCCaaggcggcgctgctgcagcacatGGCCGCGCACCCGGGCGCCCACCACGGCGCCCACCCCGGGCACCCGGGTCACCCGGGCCACCCCGGCCACCACCCCGGGCaggcgctggcgccgccgccgccgccgctgctcggctcgccgcccgcgcacccgcgccTCGGCGGCCACCACCTGCCCGGGCACGAGGCggcgcagggccagggcccgccgcgcaccgccacgccccagcagcgcgagcagcagcgggagcagcgggagcagcagcagcagcagcgcgaccagCTCCGCGGCATGCAGCCCCACCTGGCACCCTCCGTCTACGAGATGGCCGCGCTCACCTCCGACCTTGACACGCAGACCATCACCACCAAGATCAAGGAGACCCTGCTCGCGAACAACATTGGCCAGAAGATCTTCGGCGAAGTGGTGCTGGGCCTGTCGCAGGGCTCCGTGTCCGAGCTGCTGTCCAAGCCCAAGCCGTGGCACATGCTGAGCATCAAGGGGCGGGAGCCGTTCATCCGGATGCAGCTGTGGCTGTCGGACCCCCTCAACATTGAccggctgcaggcgctccggAACGAGCGGCGCGAGGCGTCCAAGCGGCGCCGCGGCTCCGGCGTCAACAGCTCGGCCGCGTCCTCCACCCCCGGCGACAACTCGTCCGACACCTCCTCCAACGACACGAGCGAGTTCTACCACTCGAcctcgcccgggccgccggcgaaGAAGCAGCGCGTCCTGTTCAGCGAGGAGCAGAAGGAGGCCCTGCGCCTGGCCTTCGCCCTCGACTCGTACCCGAACGTGGGCACCATCGAGTTCCTGGCCAACGAGCTGCAGCTGTCGTCGCGCACCATTACCAACTGGTTCCACAACCACCGCATGCGGCTGAAGCAGCAGGTGCCGCACAgcccggcctcgcccagcccgcGGGAGCAGGCCTCCCCCGGCGGTCAGACGTTCGACCCGGTGCGCTTCCGGATGCTGCTGAACCAGCGCCTGGTGGAGCTGCAGAAGGAGAggctgggcggcgtgggcgcgggCCTGGGCGCCGGTCTCGGTGCGGGCCTcggcgccggcctgggcgcTGGCCTGCCGCTGCCGTACCCACCGTACTTCGCGAGCAACGCCAACCTGGCGGCGCTCATCTCGCGCGGCCTTCTcccagcggccgcggccgcgggcttcgccggcctcgccggccccgAGCCCAAGGACTTTAACGGCCTCGACCTGTCCATCAAGCGCGAGAGCgatgacgacgaggacgacgcaATCTCCAACCCCGGGTCCGAGGACTCGGCGTCCGACCTCTCCCGGCGCACGCCGCACAAGCCCGACCAGCAGGCGCTGCTCGCGGGGCTTGCCgggctggcgggcctggcgggcgccAACCCCTCGCCCTCCTCAGGGGCGCCCAGGTCCTCAAGCTCCAGGAGAAAGCCCGCGGCGCCGCAGTGGGTCAACCCTGACTGGCAGGAGGCCAAGGATAAGGAGGTCATCATTAACGGCGTTTGCGTGATGCAGACCGACGACTACAAGATTCGCGCCGAGGAGGAGACGGTGCGCGTCGAGCCCACTGCCGTCCTGGACACGGAGCGTTTTAACGCGGAGCACGATGACGCCATGGACAGCGATGACGCCATGTCGCCCCGCAACCCAGCGGCGCACCCGGCGTCGTCCCCGCGGGGGTCGCCCCTGCAGGGCGACGCGGAGGATGGCGAGGACGATGCCGACGATATGGAGGTGGACGGCGGGCGACACTCCCCGTCACAGGCCAGCCAGGACGAGCATGAGCCGCAGGAGAGGCGGCGAGGTGTTGTGGACGATGTTGTGGACGAGGACCGGGACGGGCGGCCTTCCCCTGTGGGATCACCAGTCCAAACGGAGGCAGAGCCCACTCTCAGTTAG
Protein Sequence: MGPVPPGLPGHHLSNLLRESDALKSTFRFDEQRSPYRFSEDRSLTPNGVMMGRLGESLIPKGDPMEARLQEMLRYNMDKYANQNLDTLNIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEHSVMLLKSLIPKKGKEASLPPFIASETPDIVDERLAHILSEASQLMRAHNPDDLRSNEDSRSPADNRGESASPMNSKDGSPSRKVRKYENDDIPQEKVVRIYQEELAKIMGRRLEESMRGSAAGARGPGDQQPPPFPGLLFPHFMEGAGGLPLAARSQDDIRLALDTYHRELAKLNMAPAMEGLTPPVGLPGLLALQQQALAQQAHAMQQQQQQQQQQQQQQQQQQQQQQQQEPRQNGEAQDLSLPKERKSESRDGRDRELNGVERERERGSDGDRSAPAEASSASVERAERAERLKKEMAEATAEALRHGTSAFSLVRPKDAPGAPTASPLSNSILPPDQAGADLSGTAAVSPLQRMASITNSLISQQASAPSHTTPNPRPLKAVLPPITQQQFDQYNNLNTEEIVRKVKEALSQYSISQRLFGENVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGVNPPIPSSRSHPAASRLANLPEDMLSRLSDQHAHSKAALLQHMAAHPGAHHGAHPGHPGHPGHPGHHPGQALAPPPPPLLGSPPAHPRLGGHHLPGHEAAQGQGPPRTATPQQREQQREQREQQQQQRDQLRGMQPHLAPSVYEMAALTSDLDTQTITTKIKETLLANNIGQKIFGEVVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDPLNIDRLQALRNERREASKRRRGSGVNSSAASSTPGDNSSDTSSNDTSEFYHSTSPGPPAKKQRVLFSEEQKEALRLAFALDSYPNVGTIEFLANELQLSSRTITNWFHNHRMRLKQQVPHSPASPSPREQASPGGQTFDPVRFRMLLNQRLVELQKERLGGVGAGLGAGLGAGLGAGLGAGLPLPYPPYFASNANLAALISRGLLPAAAAAGFAGLAGPEPKDFNGLDLSIKRESDDDEDDAISNPGSEDSASDLSRRTPHKPDQQALLAGLAGLAGLAGANPSPSSGAPRSSSSRRKPAAPQWVNPDWQEAKDKEVIINGVCVMQTDDYKIRAEEETVRVEPTAVLDTERFNAEHDDAMDSDDAMSPRNPAAHPASSPRGSPLQGDAEDGEDDADDMEVDGGRHSPSQASQDEHEPQERRRGVVDDVVDEDRDGRPSPVGSPVQTEAEPTLS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00731369; iTF_00733000; iTF_00732903; iTF_01434857; iTF_01434738; iTF_00732541; iTF_00732436;
90% Identity: iTF_00731369; iTF_00733000; iTF_00732903; iTF_00732541; iTF_00732436;
80% Identity: iTF_00731369;