Tpal011684.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- ct
- Assembly
- GCA_012932325.1
- Location
- NW:7643157-7820356[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.31 2.2e+03 -1.6 0.2 47 76 84 113 70 116 0.79 2 4 6.5e-28 4.6e-24 83.9 0.0 3 72 319 389 317 394 0.94 3 4 4.8e-32 3.4e-28 97.1 0.0 3 77 786 861 784 863 0.96 4 4 3.2e-31 2.3e-27 94.5 0.0 4 75 1013 1085 1011 1089 0.95
Sequence Information
- Coding Sequence
- ATGCGTGACGTTTTCGGGCCGGGCGACACTGAAGCACGCCGACCAGCAGCGCGGAGTCGCCGGCACCGAGTGAGCGGGTGGTCGGAGCGACCAGAACGCAGCGCCGGACCCATGCTTGCGTGCTTGCGGGCGACGCTCGCAGAGCAGGAGGCGGGCCTGAGCTGCAAGCAGGGCCTGGACGCgATCGCCCAGCTGGTGGAGGACGCGGCACGCCTGCGCTCCACGCTGCGCCAGCTCCAGGAGAGCTCCGCCAAGCAGATCGCCAAGCTGGAGGAGCAGCGCGAGGCCGAGCAGAGGATGGCCcagagcctgcagcagcgcctgcaggAGCAGCAGGACTACGAGCAGATCAAGCGGGAGCTGAGCATATACCGGGCGCGCGAGCTGTcgctggccgccgagcgcgcggcgcgggaagcAGCCGCCGACCGGACGGAGGAGCGCGACCGCGCCATGGCGCTCAAGATCAAGTCGACGCCGTCCGCCAGCACGCCCGTGCACaacacgaccaccacgacgcccgcgtcgtcgccgcacgccccccacgcgcccctgccgccgcacctGCTCGTCAACGGCTCGCCCAAGAGCCCGTCCGAGGAGGGCGGCCtgtgcagcaacaacaacacgctgagcagcaacaacaacctcCTGTCGGCgccggggctgctgggccCGCACAACGGGCTGTTCATGGGccccgtgcccggcgtgcccctgcccggccaccacgccgcgcacagCCTCAGCAACCTGCTGCGCGACTCGGACGCCCTCAAGAGCCCCTTCCGCTTCGACGAGCAGCGGTCGCCGTTCCGCTTCTCCGAGGACCGCAGCCTGACGCCCAACGGCGTCATGATGGGGCGCCTGGGCGAGTCGCTCATCCCCAAGGGCGACCCCATGGAGGCGCGCCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGAACCTCGACACGCTCAAcatcgcgcgccgcgtgcgcgaaCTGCTGTCCATCCACAACATCGGGCAGCGCCTGTTCGCCAAGTACGTCCTGGGGCTGTCCCAGGGCACCGTCAGCGAGCTGCTGTCCAAGCCCAAGCCCTGGGACAAGCTGACGGAGAAGGGTCGCGACTCGTACCGCAAGATGCACGCCTGGGCCTGCGACGAGCACTCCGTCATGCTGCTCAAGAGCCTCATCCCCAAGAAGGGCAAGgaagccagcctgccgcccttCATCGCCAGCGAGACGCAGGACATGACGGAGGAGAGGATCGCGCACATCCTGAGCGAGGCGTCGCAGCTGATGCGCGTCCACAACCCGGACGAGCTGCGCTCCAACGAGGACTCTCGGTCGCCGGCCGACAACCGGGGCGAGAACGCGTCCCCGATGAACCCTAAGGACGGCTCGCCGAGCCGGAAGGTGCGCAAGTATGAGAACGACGACATCCCGCAGGAGAAGGTGGTGCGCATCTACCAGGAGGAGCTGGCCAAGATCATGGGCCGGCGCCTGGAGGAGAGcatgcgcggcggcgcggccaacctGGGCAACctgcccggcgcccggcccggcgaccaGCCGCCCTTCCCCGGCCTGCTGTTCCCGCACTTCatggagggcggcgcgggcgggctgccgctggccgcgcgctcccAGGACGACATCCGCCTGGCGCTCGACACCTACCACCGCGAGCTGGCCAAGCTCAACATGGCCCCCGGCATggaggggctgccgccgcccgtcggcctgcccggactgctggccctgcagcagcaggccctcGCCCAGCAGGCGCACGCCATGcagcagcaacagcagcagcagcaacaacagcaccaAGAGCACCGAGAGCAACTGCGGAACGGTGAAGCACAGGATCTTTCTCTGCCCAAGGAGAGGCCCAAGGAGAGCCGGAACAGCCGAGACCGGGAGCTGAACGGCAGCGACAGGGACGAGCGCGGCGACCGGGggtccgaggccggcgaccgcggcgcgggttcggagcgcggctccagcgtggcgtccgaggccggcagcaccgccgaGCGCCTCAAGAAGGAGatggccgaggccacggccgaAGCCCTGAGGCCGCTCGTCGGCAGCAGCGCCTTCTCGCTCGTCAGGCCCAAGGACGGTGGTGCAGCCACGGCATCGCCTCTGAGCAACTCGATTCTGCCACCAGACCAAGCCGGCGCTGACATGtcgggcaccgcggccgtgtcgccgctgcAGAGGATGGCCTCCATCACCAACAGCCTCATCTCGCAGCaggcgtccgcgccgtcgcacACGACGCAGAGCCCGCGGCCCCTcaaggccgtgctgccgcccaTCACGCAGCAGCAGTTCGACCAGTTCAACAACCTCAACACGGAAGAAATTGTGCGAAAGGTCAAGGAGTCCCTGTCGCAGTACTCGATCAGCCAGCGCCTGTTCGGCGAGAACGTGCTGGGGCTGTCGCAGGGCTCGGTGTCCGacctgctggcgcggcccaaGCCCTGGCACATGCTGACCCAGAAGGGCCGCGAGCCCTTCATCCGCATGAAGATGTTCCTGGAGGACGACAACGCCGTCCACAAGCTGGTCGCCTCGCAGTACAAGATCGCCCCCGAGAAGCTGATGCGCACCGGGGGATACGGCGTCAACCCACCGATCCCATCGTCGCggtcgcaccccgccgcctcgcgcctggcCAACCTGCCCGAGGACATGCTGAGCAGGCTGAGCGACCAGCACGCGCACTCcaaggcggcgctgctgcagcacatggccgcgcaccccggcgcccaccacggccagcgcgagcagcagcgGGAGCAGCAacgcgagcagcagcagcgggagcGCGAGCAGAGGGAGCAGCGGGAGCGAGAGctccgcgagcaccgcgagcgggACCGGGAGCAGCGGGAACGCCTGGCCgagcagcagcgggccgcggcgggtggAGACCAGCACCGcggaccctcgccgtcgcagctccgcggcctgcagccccacCTGGCGCCCTCCGTGTACGAGATGGCCGCGCTCACGTCGGACCTCGACACGCAGACCATCACCACCAAGATCAAGGAGACGCTCCTCGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGTGGTACTGGGCCTGTCGCAGGGCTCCGTGTCGGAGCTGCTGTCCAAGCCCAAGCCGTGGCACATGCTGAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTGTGGCTGTCCGACCCGCTCAACATCGAccggctgcaggcgctgcgcaacgagaggcgcgaggcgtccaagcggcgccgcggctcgggcgTCAACAACTCGGccgcgtcctccacgccgGGCGACAACTCGAGCGACACGTCCTCCAACGACACGAGCGAGTTCTACCACTCGacgtcgcccggcccgccggccaagAAGCAGCGCGTGCTCTTCAGCGAGGAGCAGAAGGAGGCCCTGCGCTTGGCCTTCGCCCTGGACTCGTACCCCAACGTGGGCACCATCGAGTTCCTGGCCAACGAGCTGCAGCTGTCGTCGCGCACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTCAAGCAGCAGGTGCCGCacagccccgcgtcgcccagccCGCGCGAGCAGTCATCCCCCAGCAGCCAGTCGTTCGACCCGGTGCGCTTCAGGATGCTGCTGAACCAGCGCCTGGTGGAGCTGCAGAAGGAGCgcctgggcggcgtgggcgcgggcctgccgctgccctaCCCGCCCTACTTCGCGGGCAACGCCAACCTGGCCGCGCTCATCTCGAgggggctgctgccggccgcggccgccgcgggcttcgccgggctggctggccccgagCCCAAGGACTTCAACGGGCTGGACCTGTCCATCAAGCgcgagagcgacgacgacgaggacgacgccatCTCCAACCCGGGCTCCGAGGACTCTGCGTCCGACATgtcgcggcgcacgccgctcaagccggacgcggccctggtggcggggctggcggggctggccgggctggcggggctggcggggtcggccctgtcggcgccctccgggccgccacggTCCTCCAGCTCGCGAcgcaagcccgccgcgccccagtgGGTCAACCCCGACTGGCAGGAGGCTAAGGACAAGGAGGTCATCATCAACGGCGTGTGCGTGATGCAGACCGACGACTACAAGCTGCCGAACCGGTCCTCGCAGGAGGAGACGGTGCGCGTCGAGCCCaccgccgtcctggacgcggAGCGCTACAACGCggagcacgacgacgacagcgacgacgccaTGTCGCCCAGGAACaacgcggcggcctcctcctcgcctcGTGGGTCGCCTCTGCTGCAGagggacgacgccgaggacgacgccgaggacatGGACGTGGATAGCCACCCCGGCGGCCGACGGTCGCCCTcgcagggcagccaggacgACCACGAGCCCCAGgagaggcggcacggcctcggggacgacggggcggacgAGGACAGGGACGGGAGGCCGTCACCCACCTCCTCGCCCGTCCACACGGACGTCCACACGGACGTCGACCCGGCACTCAGCTAG
- Protein Sequence
- MRDVFGPGDTEARRPAARSRRHRVSGWSERPERSAGPMLACLRATLAEQEAGLSCKQGLDAIAQLVEDAARLRSTLRQLQESSAKQIAKLEEQREAEQRMAQSLQQRLQEQQDYEQIKRELSIYRARELSLAAERAAREAAADRTEERDRAMALKIKSTPSASTPVHNTTTTTPASSPHAPHAPLPPHLLVNGSPKSPSEEGGLCSNNNTLSSNNNLLSAPGLLGPHNGLFMGPVPGVPLPGHHAAHSLSNLLRDSDALKSPFRFDEQRSPFRFSEDRSLTPNGVMMGRLGESLIPKGDPMEARLQEMLRYNMDKYANQNLDTLNIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEHSVMLLKSLIPKKGKEASLPPFIASETQDMTEERIAHILSEASQLMRVHNPDELRSNEDSRSPADNRGENASPMNPKDGSPSRKVRKYENDDIPQEKVVRIYQEELAKIMGRRLEESMRGGAANLGNLPGARPGDQPPFPGLLFPHFMEGGAGGLPLAARSQDDIRLALDTYHRELAKLNMAPGMEGLPPPVGLPGLLALQQQALAQQAHAMQQQQQQQQQQHQEHREQLRNGEAQDLSLPKERPKESRNSRDRELNGSDRDERGDRGSEAGDRGAGSERGSSVASEAGSTAERLKKEMAEATAEALRPLVGSSAFSLVRPKDGGAATASPLSNSILPPDQAGADMSGTAAVSPLQRMASITNSLISQQASAPSHTTQSPRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKESLSQYSISQRLFGENVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGVNPPIPSSRSHPAASRLANLPEDMLSRLSDQHAHSKAALLQHMAAHPGAHHGQREQQREQQREQQQREREQREQRERELREHRERDREQRERLAEQQRAAAGGDQHRGPSPSQLRGLQPHLAPSVYEMAALTSDLDTQTITTKIKETLLANNIGQKIFGEVVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDPLNIDRLQALRNERREASKRRRGSGVNNSAASSTPGDNSSDTSSNDTSEFYHSTSPGPPAKKQRVLFSEEQKEALRLAFALDSYPNVGTIEFLANELQLSSRTITNWFHNHRMRLKQQVPHSPASPSPREQSSPSSQSFDPVRFRMLLNQRLVELQKERLGGVGAGLPLPYPPYFAGNANLAALISRGLLPAAAAAGFAGLAGPEPKDFNGLDLSIKRESDDDEDDAISNPGSEDSASDMSRRTPLKPDAALVAGLAGLAGLAGLAGSALSAPSGPPRSSSSRRKPAAPQWVNPDWQEAKDKEVIINGVCVMQTDDYKLPNRSSQEETVRVEPTAVLDAERYNAEHDDDSDDAMSPRNNAAASSSPRGSPLLQRDDAEDDAEDMDVDSHPGGRRSPSQGSQDDHEPQERRHGLGDDGADEDRDGRPSPTSSPVHTDVHTDVDPALS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00731257;
- 90% Identity
- iTF_01434857;
- 80% Identity
- iTF_01434857;