Basic Information

Insect: Fissipunctia ypsillon
Gene Symbol: -
Assembly: GCA_947568875.1
Location: OX387672.1:840862-844294[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0029 0.31 12.4 0.2 1 23 77 100 77 100 0.95

2 21 1.2 1.3e+02 4.2 0.1 2 23 127 148 126 148 0.95

3 21 0.78 82 4.8 1.3 1 23 170 192 170 192 0.97

4 21 2.3e-05 0.0025 19.0 1.0 1 23 196 218 196 218 0.98

5 21 0.84 89 4.7 0.2 1 23 223 246 223 246 0.88

6 21 0.012 1.3 10.5 0.7 1 23 252 275 252 275 0.89

7 21 0.0064 0.68 11.3 0.2 1 21 282 302 282 303 0.94

8 21 0.036 3.8 9.0 0.1 3 23 399 420 397 420 0.92

9 21 1e-05 0.0011 20.1 0.3 1 23 468 490 468 490 0.98

10 21 0.059 6.2 8.3 0.1 1 23 495 518 495 518 0.93

11 21 0.0049 0.51 11.7 4.1 1 23 524 547 524 547 0.96

12 21 0.0094 1 10.8 0.1 1 23 591 613 591 613 0.97

13 21 5 5.3e+02 2.2 2.6 2 23 637 659 636 659 0.93

14 21 5.3e-05 0.0056 17.9 3.5 1 23 681 703 681 703 0.99

15 21 0.0025 0.26 12.6 3.3 2 23 708 729 707 729 0.95

16 21 0.0052 0.55 11.6 1.9 1 23 737 760 737 760 0.92

17 21 0.0075 0.8 11.1 0.7 1 23 766 789 766 789 0.97

18 21 0.018 1.9 9.9 0.7 1 23 795 818 795 818 0.96

19 21 5.4e-05 0.0057 17.8 0.8 1 23 824 846 824 846 0.97

20 21 2.9e-06 0.00031 21.8 0.8 1 23 852 874 852 874 0.99

21 21 0.00012 0.013 16.8 5.2 1 23 880 902 880 903 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0029	0.31	12.4	0.2	1	23	77	100	77	100	0.95
2	21	1.2	1.3e+02	4.2	0.1	2	23	127	148	126	148	0.95
3	21	0.78	82	4.8	1.3	1	23	170	192	170	192	0.97
4	21	2.3e-05	0.0025	19.0	1.0	1	23	196	218	196	218	0.98
5	21	0.84	89	4.7	0.2	1	23	223	246	223	246	0.88
6	21	0.012	1.3	10.5	0.7	1	23	252	275	252	275	0.89
7	21	0.0064	0.68	11.3	0.2	1	21	282	302	282	303	0.94
8	21	0.036	3.8	9.0	0.1	3	23	399	420	397	420	0.92
9	21	1e-05	0.0011	20.1	0.3	1	23	468	490	468	490	0.98
10	21	0.059	6.2	8.3	0.1	1	23	495	518	495	518	0.93
11	21	0.0049	0.51	11.7	4.1	1	23	524	547	524	547	0.96
12	21	0.0094	1	10.8	0.1	1	23	591	613	591	613	0.97
13	21	5	5.3e+02	2.2	2.6	2	23	637	659	636	659	0.93
14	21	5.3e-05	0.0056	17.9	3.5	1	23	681	703	681	703	0.99
15	21	0.0025	0.26	12.6	3.3	2	23	708	729	707	729	0.95
16	21	0.0052	0.55	11.6	1.9	1	23	737	760	737	760	0.92
17	21	0.0075	0.8	11.1	0.7	1	23	766	789	766	789	0.97
18	21	0.018	1.9	9.9	0.7	1	23	795	818	795	818	0.96
19	21	5.4e-05	0.0057	17.8	0.8	1	23	824	846	824	846	0.97
20	21	2.9e-06	0.00031	21.8	0.8	1	23	852	874	852	874	0.99
21	21	0.00012	0.013	16.8	5.2	1	23	880	902	880	903	0.96

Sequence Information

Coding Sequence: ATGATAACATATTGTTCCGCTCACGAAGCGGAGAGGAATCTAGGCGTTAGACGCATTAGGAAGTTGAAGGAAAACGTTAGCGATCGCCAGATGCGAAGGCGACGACGCGCCAACAACCAACTCCCCGAAGAATCAGAGAAAAGAATATCCAAAACCATGATGCGTCGAAACGCAATGACCCTTTTAGAATATTCGACAGCCTGGGCCTTTCGATGGTTCCATAGCGCTTTTTACTGCTCATACTGCGACGCTAAGTTCGTCGATGTACCTCTACTTCGCTCACATGTCAAAGCTAATCATCTAAATGACTCACCCACTGACAGAATCTTCTCGAAGTTAAAAGAAAATAATATGGTCAAAGTCGACGTAGCTGAGCTTAGCTGTAGGTTGTGTAGCAGGCTCCTAAACAGTATTGACGCTTTAAAAGATCACCTATTGATACACGGCAAGACTTTGAACGTTGAATacagtgatggggtcctgcctttcaagttagatgaagaaggcttcacctgccagctgtgtttcgcccaatttctgactttcgccaaaatgaacgagcatatgaacacacactttcaaaattatatttgcgattcttgcggaaaagctttcgtttcaaaatcaaggtttagaaaacacgtacagtcacacgaaaaggggagtttcccttgcggagagtgtggtgaagttttAGAAACGCGAGCGTCTCGAATGTGTCATATAATGCGAATCCATAGAAAAGGCGTTCGCTACGCTTGCCCAAGATGCCCCGAAGTTTTTACAACCTACCACACGAGAGTAAAACATTTAGTAGAAACCCACGCCCAACAGAGAAAAGAATACTACTGTAATGCTTGCGACAAGTCTTTTGAAACCAGCTCCAAAAGAGCAGGACATATACGGGCGATAGAAGAAAAAGAAATGGCAGCAGGAAAGTCCACTAAAATAGTTTGGAAGAGAAAATGCCGAATTAAAGAAGATGCAGCAAATGCAGCTATTATAATAAAACACTCGAATGCAGTAGTATTCAGATTGCATAGAGGCAAATTCATGTGCGCTTACTGCCCAAAGATATGTTTAAACGTACCGGAAATTCGAGAACATTCAGTTATTCATGGGAAGCTCGAAATATTCGAGAACCCTGCTGTGAGAAACTCGTTTCCTCTACGAATCGATATCACAGATTTAGCATGTAGTTTATGCGGCGAAAATGTGCAAAATATAGACAATTTAAAGACACACATAGAAGAGAAGCATTCAAAGATGATTGACCCGGATTTTTCGGATGGTGTCATACCATTCGTTTTAACTGGCAAAGAATACAGATGCGTCCACTGCAGCTTACTATGTGAAGGCTTCATGACTTTGTTCACGCACATGAACCAACATTACCAAAGCTATGTTTGCCCCACATGCGGCAAAGGATTTTCGGGACGCAATAAGCTTCGTAGCCACCTCGTTACCCACGAATTTGGACAATTCAATTGCCCAAAATGCAATTCAGTATTCCCTAATCGTGCTGCGAAGAACGGGCATTTGGTCACAGCTCATGGAAGAAAAGATAGATATAGGTGTCCAGTTTGTGATCAACATTTTAGTCACTACCGTTCAAGACTAAGGCATTTAGATAAGGCGCATGGGCCAGAAAGGCCCGTCGAACTCAAAGTAAAATGGAGGCCAACACGCAAGTATAACGATCACAGAGATAATGCCGCTATCATTCTCGAAAGTTCCAACGCTTGTCCTTTTAGGTGGAGACGAGGGGCCTTCACTTGCGCGTACTGTCCGCTTTCCTTCGGAGATTTCAGTGGTGTAAAGGACCATACTATAGTACACCCTAACAAGATCGAAGCCCTTCGCAAGGCGCGACCGTTTGCAAACGTCAAAATGGAAGTTACTGAGCTACGATGCGAATTATGTCTCATGCGAATGACGAGCTTAGATCATCTTTGCGAACATTTGCTCCAAAATCATAACAAACCAATAATCAGTAAACATGGTATAGGAGTCACACCTTACTATCTGGCAGGGAAAGAATATAAATGCACTCATTGTGATGAAACATTTGTTCTGTTCTCCAAATTGAACTCACATTTGAACACGCACTATCCAAATTGCATCTGTTTCCAATGCGGTAAAGCATTCTCGTCCGTGCACAGGCTGAAATCCCACTTGCTCATCCACGATTCGGCACCCGCTGCCCAATTTAAATGCACTAAATGCGACCAAGTTTTCGCCACACGTGTCTTGAGAAATAATCATACAACCCAAAAACACGGCCCAGAATTCAGATACAGGTGTCCTTACTGCAAAGATACTTTCAAAAGCTACGCTGACAGAGGAAGGCATTTGAAAGTGGCGCACGACAAAAAAATCGAATATCCCTGCAATTTGTGTCCAGCAGTTTTCGCCATGTGTAATCAAAGGACCAAACATATAAAACAAGTTCATATGGGAATTAAGTCATTCGCGTGCACTTTTTGCTCGTACAAATTTGTGACAGCTGCTCAGTTGAGGAGTCATATGATAAAACATGGAGGGGAGAGGAAGTATCAATGTGAGGTGTGCAAGAAAGCGTATGCGAGGACCAAGACTTTGCGGGAGCATATGAGGATACATAATAATGATAAGAGATTTGTTTGTCAGTACTGTAATACTGCGTATGTTCAGAAGTGTAGTTTGCAAAGTCATTTGAGAACGCACCACCCTACAGCAGAACCTTTGAAAAAGGTTAAGATATCTAATCTGTATTAG
Protein Sequence: MITYCSAHEAERNLGVRRIRKLKENVSDRQMRRRRRANNQLPEESEKRISKTMMRRNAMTLLEYSTAWAFRWFHSAFYCSYCDAKFVDVPLLRSHVKANHLNDSPTDRIFSKLKENNMVKVDVAELSCRLCSRLLNSIDALKDHLLIHGKTLNVEYSDGVLPFKLDEEGFTCQLCFAQFLTFAKMNEHMNTHFQNYICDSCGKAFVSKSRFRKHVQSHEKGSFPCGECGEVLETRASRMCHIMRIHRKGVRYACPRCPEVFTTYHTRVKHLVETHAQQRKEYYCNACDKSFETSSKRAGHIRAIEEKEMAAGKSTKIVWKRKCRIKEDAANAAIIIKHSNAVVFRLHRGKFMCAYCPKICLNVPEIREHSVIHGKLEIFENPAVRNSFPLRIDITDLACSLCGENVQNIDNLKTHIEEKHSKMIDPDFSDGVIPFVLTGKEYRCVHCSLLCEGFMTLFTHMNQHYQSYVCPTCGKGFSGRNKLRSHLVTHEFGQFNCPKCNSVFPNRAAKNGHLVTAHGRKDRYRCPVCDQHFSHYRSRLRHLDKAHGPERPVELKVKWRPTRKYNDHRDNAAIILESSNACPFRWRRGAFTCAYCPLSFGDFSGVKDHTIVHPNKIEALRKARPFANVKMEVTELRCELCLMRMTSLDHLCEHLLQNHNKPIISKHGIGVTPYYLAGKEYKCTHCDETFVLFSKLNSHLNTHYPNCICFQCGKAFSSVHRLKSHLLIHDSAPAAQFKCTKCDQVFATRVLRNNHTTQKHGPEFRYRCPYCKDTFKSYADRGRHLKVAHDKKIEYPCNLCPAVFAMCNQRTKHIKQVHMGIKSFACTFCSYKFVTAAQLRSHMIKHGGERKYQCEVCKKAYARTKTLREHMRIHNNDKRFVCQYCNTAYVQKCSLQSHLRTHHPTAEPLKKVKISNLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00038050; iTF_00123618; iTF_00040096; iTF_00772239; iTF_00446432; iTF_00447472;
90% Identity: iTF_00038050;
80% Identity: -