Fadi017182.1
Basic Information
- Insect
- Fabriciana adippe
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905404265.1
- Location
- FR989989.1:2100572-2117120[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-76 2.7e-72 244.2 20.6 1 263 120 376 120 392 0.92 2 2 0.38 1e+04 -4.0 8.7 205 253 396 444 375 450 0.59
Sequence Information
- Coding Sequence
- ATGGGCGAGCAATCCGTGTCGGCCACTCCTGAAAACAGCGACGAGGAGAGTGGAGATGCTTTTACAGATGGTGATTTTGGTGATTCCGAAGAAGAAACTGTGGTAGAGCGTAATTTAGTTAAAACAGCACATATGCCTATCAATGAAAGTGTTAATTCCGAAATTAAAGTGAACAGTGATATTGATTGTACCGATGACAGTTTAGACCAAGCGAATGGTGTTCAGGAATTTGCTGATGGGAAGGAAGAAAATATGCATTTCGGTGACTTTGCTAATTGTGACAGCTCATCGGATTTACGAAGAGATTCGCAAAGTGATGGCTCCATCGTTGGAATTCTCGGCGATCAGCATAGTCACGCAGAACAACGACTAGCGGCGCGTCGCGCTGCGCGGGCGGAGGCGCGGGAGATCCGCATGCGGGAGTTGGAACGACAGCAGCGCGAGCAAGAGGACCATGCTGATAAGGCGTATGATATGTACGCAGAGACGGTGGGAAGGCGGACAGGCGGTCGGTTAGCCGTGTTGAGTCCCAGCACGCTACACTCGCCCCGACGCAGTTCAGAGGATTCTGACGATGTGCTTAGCATCAAGGACCTTAGGCATGAATTAAAAGAAGTGGAGGAGAAGTTCCGTAAAGCTATGATCCTCAACGCCCAGCTGGACAACGACAAAGCGGCGCTCGGTTACCAGCTCGAGTTGCTCAAGGACAGGATAGAAGAGTTGCAGGAGGAGTATGCACAGTTACAGCGCGAACACAAAGAGAAGTGTTCAACGCACGAGCGGCTGAAGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGGCGGTGGCGCGCGACGCCGTGCGCGCGCGCGACGCGGCGGCGGCGGCGGCCGGCCGCGCCTTCGTGGAGGCGGCGGCGGCGCCCGACGCGCCCGCCGGCGCCGCCTGCGGCCGCGTGCCGCCGCTCGCGCTCGTCAGCCACGACAGCGAGCGCCTGCTCAACGACGCGGGGGAGGGCACGCTGGACGTGCGGCTGGAGCGGCTGGCGGGCGCGAAGGCGGCGCTGGAGGGCGAGGTGCGCAAGCTCAAGCTGCAGCTGAACGAGGAGCGCGCCGCGCGGCACAACGGCGTCGCGCACCTGCACCAGGACGTCGAGGCCGAGCTGGAGGCGCTGCGCAAGTCGGCCACGGAGGCGAAGGCGCGGGCGGCGCGCGCGGAGGCCGAGGCGGCGCTGCAGGCGGCGGCGGCGGCGCGCCTGGAGGCGCAGGCGAGAGAAGCGCTAAATCGAGTGGAAGAATTAGAAACCGAAAATAGCCATCTTACAAAACGTCTGGACAAATTGAAAAATGCCAAGTCCGCGCTATTAAAGGACCTGTGA
- Protein Sequence
- MGEQSVSATPENSDEESGDAFTDGDFGDSEEETVVERNLVKTAHMPINESVNSEIKVNSDIDCTDDSLDQANGVQEFADGKEENMHFGDFANCDSSSDLRRDSQSDGSIVGILGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRTGGRLAVLSPSTLHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSTHERLKREHASLEREVAVARDAVRARDAAAAAAGRAFVEAAAAPDAPAGAACGRVPPLALVSHDSERLLNDAGEGTLDVRLERLAGAKAALEGEVRKLKLQLNEERAARHNGVAHLHQDVEAELEALRKSATEAKARAARAEAEAALQAAAAARLEAQAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00159858; iTF_00248100;
- 90% Identity
- iTF_00159858;
- 80% Identity
- -