Esal024070.1
Basic Information
- Insect
- Euura saliciscinereae
- Gene Symbol
- lola
- Assembly
- GCA_018420115.1
- Location
- JAFFZH010016218.1:234263-238275[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-16 8.1e-13 48.5 0.0 2 42 371 412 370 415 0.94 2 2 6.7 6.3e+03 -2.4 0.1 29 36 455 462 455 468 0.80
Sequence Information
- Coding Sequence
- ATGTCGATGCAGCAGTTTTGTCTACGATGGAACAATCATCAACCAAATTTTATATCAGTATTTTCAAACTTGTTGAACAATGAGACTCTGGTCGACGTCACGTTGGCCGCCGAGGGGAGACACCTTCAGGCGCACAAAGTCGTTCTATCAGCTTGCAGCACGTACTTTCAATCTCTTTTCACCGTCAATCCTTGCCAACATCCGATCGTCATTCTCAAGGACGTGAAATTCTCCGATCTTAAAATAATGGTCGACTTCATGTATTACGGAGAAGTCAACGTCTCCCAGGACCAACTGCCTTCCATCATCAAGACTGCGGAGAGTCTGAAGATCAAAGGTTTGGCCGAAATGCATACCGCGTCCGTGACCAAATGGCCGAGCGGAAGTAGCGAGCCCGGGGGAGGAGACAGAGGAGAGTCTTGTTCTCCGAGTCCTTCGCCTTTGAGTCCGTCTCTGAGGCGTAAAAGATTGAGGAAAACGTCAACCGGTTCGACTTCTGGCTCTGGAGAAAAATCTGAGGAGATTAACGAGATCACTCTGGTAGCGACCAACGTCGTTAAACCCGAACCGTCTATTATCAACCAGGATGAACATCTGAGGAGACCGATGAACGCGAGCACAGAGTCCCAAGGGAGTATCGACGAAGACCAAATTTCTATTATGAGTAATATGGAAAGTAGTTCAGCCACTACGCCGGTACAGAGCGAGGGATCGATGCAGGACATGAGTCAACAATCAGGAAACAACGGTGGTCAGAGTACCGGAGTCTCTCAACCGCCGACGCACCAAGGATTGCAATGGACAATAATGGAGCACACGTATCCACGTTTCGCTTTGTCGTCATGTCAAACGAATCTGTCGATCCAAGCACCATCAGCTTTTACGACACCTGAAATAACGACGCCGCCACCGGTCAGTGGCCAGTACTCGACAACAAGCACGACAGCACCTAGCTGCGCCCTGACCAACTATTCAAACTCTTCTCATGCATCGGTTCAACACTCCTCAGGCGGGACAACGCCTCCGGCGCCGTGCACTACGAACTGCCAAAGTCCGTGCGCTAGCCCACAAACTGCGATTAAACGAAAAAGATCAACGAATCCTCAGGCTGATGAGAATTTTATCAGAGCTCTAGACGCCGTTCGGTACGGAGGTATAGGGTTTTGCAAAGCCGCTAGGATGTTTGGTGTAAATAATCGAACTCTATGGCTGGAGTACAAGAAGCGTGGATATCCGAATAATCGACCTAGTGTTAAATCGAGGGTAAAACAAGAAGTTAACGCCTCTCCGCCGCCGACACAACTCAGCCAACCCCAACTAAGCAATTCCCAAAGTCCTTCGCCCATGGGGCCGCCGTCTACCCCGCACAGTACTCTGAACGCTCATACGACCCACACGATGCACATGGCACATACGCCGCACACGATGCTCAGTGGTTATTTGGACAACAGGCACAGCGATTTTGCCCTTCAGAGTACAGCCATGCCGATCAATTTACACGGCGTTAATTATAACTCCATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSSEPGGGDRGESCSPSPSPLSPSLRRKRLRKTSTGSTSGSGEKSEEINEITLVATNVVKPEPSIINQDEHLRRPMNASTESQGSIDEDQISIMSNMESSSATTPVQSEGSMQDMSQQSGNNGGQSTGVSQPPTHQGLQWTIMEHTYPRFALSSCQTNLSIQAPSAFTTPEITTPPPVSGQYSTTSTTAPSCALTNYSNSSHASVQHSSGGTTPPAPCTTNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSVKSRVKQEVNASPPPTQLSQPQLSNSQSPSPMGPPSTPHSTLNAHTTHTMHMAHTPHTMLSGYLDNRHSDFALQSTAMPINLHGVNYNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00719541; iTF_00060106; iTF_00060450; iTF_00159219; iTF_00159021; iTF_01200062; iTF_01200309; iTF_00938591; iTF_00938861;
- 90% Identity
- iTF_00938591;
- 80% Identity
- iTF_00719541;