Malb010847.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- lola_1
- Assembly
- GCA_949628255.1
- Location
- OX451207.1:36474613-36479146[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-15 1e-12 48.5 0.0 2 42 373 414 372 417 0.94 2 2 8.5 7.6e+03 -2.4 0.1 29 36 455 462 455 468 0.80
Sequence Information
- Coding Sequence
- ATGTCGATGCAGCAATTTTGTCTACGATGGAACAATCATCAACCAAATTTCATATCAgtattttcaaacttattgaACAATGAAACATTGGTCGATGTTACACTCGCAGCTGAGGGGAGACATCTTCAAGCTCACAAAGTTGTCCTATCAGCTTGCAGTACATACTTTCAATCTTTATTCACTGTTAATCCTTGCCAACATCCTATCGTCATATTAAAAGACGTCAAGTTTTCAGACCTTAAAATAATGGTCGATTTTATGTATTACGGAGAAGTCAATGTCTCGCAAGATCAACTACCCTCCATCATCAAgactgcCGAGAGTCTGAAGATCAAAGGTCTTGCTGAAATGCATACAGCGTCTGTAACAAAGTGGCCAAGTGGAAGCAGCGAGCCAGGCGGAGGAGATAGAGGTGAATCTTGCTCTCCTAGTCCGTCGCCATTGTCTCCGTCATTGAGACGGAAAAGGCTGAGAAAAACATCTACTGGTTCTACTTCTGGTTCGGGTGAAAAGTCAGaggaaataaacgaaattacATTAGTAGCAACTAACGTCGTCAAACCTGAACCGTCAGTCGTGACACAAGAAACTGGCGAACATTTGCGTAGACCGTTGAATGCCAGTACAGAATCACAAGGAAGTATCGACGAAGACCAAATATCAATCATGAGTAATATGGAAAGTAGCTCTGCTACAACTCCGGCACAAAGCGAGGGATCGATGCAGGATATAAGTCAACAATCAGCGGGTAATGCAGCACAGAGTTCTGCCGTGTCTCAACCGCCGGCCCATCAAGGATTGCAATGGACAATAATGGAGCACACGTATCCACGTTTCGCTTTGTCGTCATGTCAAACGAATCTGTCGATCCAAGCACCATCAGCTTTTACGACACCTGAAATACCGACGCCGCCACCCGTCAGTGGTCAGTACTCAACTACAAGCACGACCGCATCCAGCTGCGCTCTGACCAACTATTCAAACTCTGCTCATTCAACGGGTCAACACTCCTCAGGCGGGACAACGCCACCGGCGCCGTGTACAACCAACTGCCAAAGTCCCTGTGCTAGCCCGCAAACGgcaaacaaaagaaaaagatctACAAATCCACAagctgatgaaaattttattagagCTCTAGACGCCGTTCGGTATGGGGGCATAGGTTTTTGCAAAGCAGCACGTATGTTTGGTGTTAATAATCGAACTCTTTGGCTCGAGTATAAAAAACGGGGATACCCTAACAATCGACCCAGTGTCAAATCCAGGGTAAAACAAGAAGTTAACGCTTCCCCACCACCGACACAACTGAGTCAGCCCATTAATTCGCAAAGTCCTTCGCCAATGGGGCCACCATCTACCCCACATAGTACTCTGAATGCTCATGCTACCCATACTATGCACATGGCACATACACCGCATACTATGCTGAGTGGTTATCTAGACAACAGACATAGCGATTTTGCCCTTCAGAGTACAGCGATGCCCATCAATTTACATGGTGTCAATTATAATTCCATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSSEPGGGDRGESCSPSPSPLSPSLRRKRLRKTSTGSTSGSGEKSEEINEITLVATNVVKPEPSVVTQETGEHLRRPLNASTESQGSIDEDQISIMSNMESSSATTPAQSEGSMQDISQQSAGNAAQSSAVSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQAPSAFTTPEIPTPPPVSGQYSTTSTTASSCALTNYSNSAHSTGQHSSGGTTPPAPCTTNCQSPCASPQTANKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSVKSRVKQEVNASPPPTQLSQPINSQSPSPMGPPSTPHSTLNAHATHTMHMAHTPHTMLSGYLDNRHSDFALQSTAMPINLHGVNYNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00719318;
- 90% Identity
- iTF_00938861; iTF_00060106; iTF_00060450; iTF_00719318; iTF_00719541; iTF_01200062; iTF_01200309;
- 80% Identity
- iTF_00938861;