Basic Information

Insect: Eurytoma californica
Gene Symbol: RREB1
Assembly: GCA_035586675.1
Location: JAXIUT010000001.1:21979079-21994028[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.017 2.2 10.0 0.0 1 23 52 74 52 74 0.96

2 16 0.0016 0.2 13.2 0.0 1 23 89 111 89 111 0.97

3 16 6.7e-07 8.7e-05 23.8 2.6 1 23 117 140 117 140 0.98

4 16 5.7 7.3e+02 2.0 0.0 3 23 226 248 224 248 0.79

5 16 2 2.5e+02 3.5 3.4 2 23 254 276 254 276 0.91

6 16 6 7.7e+02 1.9 0.6 1 14 329 342 329 348 0.79

7 16 0.052 6.7 8.4 0.1 1 23 465 487 465 487 0.96

8 16 3.2e-05 0.0041 18.6 0.3 1 23 496 518 496 518 0.98

9 16 0.00043 0.056 15.0 2.5 1 23 524 547 524 547 0.97

10 16 0.00027 0.035 15.6 3.1 1 23 919 942 919 942 0.97

11 16 0.00082 0.11 14.1 0.1 3 23 1217 1237 1215 1237 0.97

12 16 0.37 47 5.8 6.5 1 23 1243 1266 1243 1266 0.97

13 16 0.02 2.6 9.7 2.1 1 23 1329 1353 1329 1353 0.94

14 16 9.3 1.2e+03 1.4 2.7 1 23 1459 1482 1459 1482 0.85

15 16 0.004 0.51 12.0 0.3 3 23 1532 1552 1530 1552 0.96

16 16 1.7 2.1e+02 3.7 8.2 1 23 1558 1580 1558 1580 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.017	2.2	10.0	0.0	1	23	52	74	52	74	0.96
2	16	0.0016	0.2	13.2	0.0	1	23	89	111	89	111	0.97
3	16	6.7e-07	8.7e-05	23.8	2.6	1	23	117	140	117	140	0.98
4	16	5.7	7.3e+02	2.0	0.0	3	23	226	248	224	248	0.79
5	16	2	2.5e+02	3.5	3.4	2	23	254	276	254	276	0.91
6	16	6	7.7e+02	1.9	0.6	1	14	329	342	329	348	0.79
7	16	0.052	6.7	8.4	0.1	1	23	465	487	465	487	0.96
8	16	3.2e-05	0.0041	18.6	0.3	1	23	496	518	496	518	0.98
9	16	0.00043	0.056	15.0	2.5	1	23	524	547	524	547	0.97
10	16	0.00027	0.035	15.6	3.1	1	23	919	942	919	942	0.97
11	16	0.00082	0.11	14.1	0.1	3	23	1217	1237	1215	1237	0.97
12	16	0.37	47	5.8	6.5	1	23	1243	1266	1243	1266	0.97
13	16	0.02	2.6	9.7	2.1	1	23	1329	1353	1329	1353	0.94
14	16	9.3	1.2e+03	1.4	2.7	1	23	1459	1482	1459	1482	0.85
15	16	0.004	0.51	12.0	0.3	3	23	1532	1552	1530	1552	0.96
16	16	1.7	2.1e+02	3.7	8.2	1	23	1558	1580	1558	1580	0.98

Sequence Information

Coding Sequence: ATGAGCGAGATCGCCGTGGAACCGCCGCCGAGCGTCGGCATGGATTTCTCCGTCAAAGTGACTGCCGAGACTGGACCCGATCAGCGCGACGGACGCAGCGAGAGTCAAACGGATGTTGCATCATCACCAGTGGTCGAGCAGCCGGAAGGTAGCCACCCGTGCCCGGCGTGTCCCCTGGTGCTGCCGAGTTCCCGCGAGCTGACGACGCACCTGCGCGGTCACaactcgccgcgcggcagcacgGACAGCGGCGAGGAGGCCGACTACGCCTGCGGCGTCTGTCGCAAGGTACTGAGCTCGGCGAGCTCCCTCGACCGCCACGTCCTCGTGCACTCGGGCGAGCGGCCCTTCAAGTGCAAGCACTGCGATATGGCCTTCACGACGAACGGCAACATGAACAGGCACCTGCGCACCGCCCACTGCTCCGCCTCGCCGGGCCAGCACAGCTGCACCGACTCCGACGGCAGCAGCGACAGCGAGCGGCCCCGCACCACCGGCAGCAACCACATCCACGAGGAGTACAACAACAACGAGGTGGCGACCGAGCGCAAGTCGCCCGCCCTCAAGCGCAAGTGCCCGGACTACGCGGACGAGGTCGAGGTCCAGCAGCGCCGCCACAAGATCCTCCTCGGCGCGTACGCCGACCTCGACTCCCGCTACCCCGGCAGCTACGGCTGCGCCGTctgcggccgcggcgacttCGCCAGCGACGCCCAGCTCGAGGCCCACATGGAGCGCCAGCACCCCGAGAGCCAACCCCGCTGCGAGCCTTGCAACCAGGTGTTCAAGAACCACTGCGCGTTCAACGTGCACCGCTACGTGAGCCACTGCCGCGAGACCGAGAGCCCGCGCAGCCTGCGCAACTCCGTCGTCGGCTTCAACGACCTGACCTTCGTCGACTTCTCGGCGGTCAAGTTCCCGGCCATCGCCCGGGCCGTCTGCGAGCGCTCCCTGCACCGGCCGGCGTCCGGGGAGACGCCGCGCTACCAGTGCTCCAAGTGCCTGCGCGCCTTCCCCTGCCGCTCGGCCCTCGACGGCCACGAGAGCGACTGCGGCCTGCAGCCGCCGACGGAGCAGCGGGGCCACGGGCCCGAGGACCAGTCTCTGCGCGACGACTTCTTCGCCGGCCTGGACCTGCAGAACAAGGCGGCCCTCGTCGAGGCCAAGGAGGGCAAGGACCTCGCCGACATCCAGAGCATCATCTCCGTCACCTCCGGCCCGATTCTGCAGAACTTCTCGCGCTCGGACGCCGGCACCCCGGACAACTGCAAGCTGTCCAGGCAGGGCTTCGGCTCGTCCGGCTCCTCCGGCACACCCAGCTCCGAGTGCCTCGACGAGGAGGGCCAGGAGATGTTCGCCGCCGAGTTCCGCAAGATGAAGCTCAAGGGTGAATTCCCCTGCAGGCTGTGCAAGGCCGTCTTCCCGAACCTGCGTGCCCTCAAGGGCCACAACAGGGCGCACATGGGGGTGCCCGCGGGTCTTCCCTATCCCTGCAACATGTGCCCCTACAGCAGCACGGACAAGGCCACGCTGGTGCGCCACCTGCGCTCGCACAACGGCGACCGGCCGTACGAGTGCTCCATCTGCAACTACGCCTTCACGACCAAGGCCAACTGCGAGCGCCACGTGAGGAACAGGCACGGCAAGCTGTCGCGCGACGAGATCAAGAGCGTGCTCATCTACCACCCGAGCGAGGACTCGGCGAACGACGCCGCGGGTCTGGAGGCGGGCTCGCCTAGGCCGGGCCTGGCGCGCGACGAGGTCCGCAAGGCCCTGGTCTACCCGCCAGAGCGCGAGGAGACCTCGCAGCCGCCGCACTACCCGTCGGCGGAGATCCGCGTGAAGGACGAGGCGAAGCTCAGGCAGCCCGGACTGGTCAGCCTGGGCCTCGGTCTCCCCGGCTACGACAAGGCCGAGCTCTTCCCGCGGCCGCTGGACGTCGCAGCCGTAAACTACGAACAGACCAAGTCCCACCACGAGGACGACATGGACTCGCGCTCCTCCACGGGCAGCGTGTCTCTAGTCAGCGAAACCAAATCCGAGGCGCACGAAAGAGCTCAGACGGGACCGATCGACCTGAAGAAGCCGTCGGAGGAGTCCGCGGAGCAGTCCACCCACGGCGAGGACGCACCCCTGGACCTCTCCATGGACGTGCTCGACCTCAGCAGGAAGGCCAACGCGGAGGCCgcagccgccgcggcggcttcGGCTGCCGTGGCTGCATCGAAGGAACGCGAGGGCGACGAGACCTACGCCGCCGCGGATCCTAGCCTCAAGGAGAACAGCTTCTACAGCTCAGCTAACCAGCTGCTCCTCACGCAGGCGCTGCTGAAGGCCGGTCAAGCGCAGCCCTCGTCACTCGAGAGGTTCTACGCCAACGCCCACATGCTCTACCAGAACTTCGGCAGCTTCTCGGCGGTGGGCGCCGGCATCCTCCAGCCGTACCTCTTCGGGCCGCATCTCTTCGGCCAAGATTTCGCGATGAAGGACCGTCTGCAGAAGGGTCTGGTGCGCGGCCTGCAGACCAGCGGCGGCAGCCTCGTCGAGCCTGCCGGCAGTGGATCCAGCTACACGCCCGTCTTTCCCCAGGCCCGCAACGACCAACCGGACTACCTGAGGCAGCAAGGCGTCGCGCCCGGACCCTCCAGAGACAATCACGACTCCGGGTCGAGCGCCAACTCCGTGAAGATGGTCATAAAGAACGGCGTGCTGATGCCGAAACAGAAGCAGCGAAGATACCGCACCGAACGACCTTTCACCTGCGAGCACTGCAATGCGAAGTTCACCCTGCGCAGCAACATGGAGCGTCACATCAAACAACAGCATCCACAGTACTGGAGCCAGCGCCCTAGAGGCGGACACTCGACCAGAGGTCGCCCACCCGCAAATCCCCCGACGCTCTTGCAGAGCCTGAGGCAGTCGCCGATTTCGCACGCTTACGGCGGCCTCTTACCGAGGCTTGGACAAGATGCTTTGAGAAAACATGCCATCTCCGATCAGGTCAAGTACGCCATCCTGGCGCAACAGCTGAAAGGTAACAAAACAGAAGAGAACGACACGGACGAAGAGCTGGTGATCGACGAAGAAGAAGCGGCAGCAGCGGCGAGGGAGCCCACCGAAAGGACTCTGAGCCTGCTGAGGGGCAAGCTCGAAGCTAATCTCGAATCAAAAGCCGGAGACAGCAGTCTCGCCGTCAACCACCGGGAGGAGGGCGCGAACGAATCCATTAAGCGAGAGGTCGAGGATGCCGAAGAAGAGCCTGCGGTCGAAATTCACGACATGAAGAGGGAGACCTCCAGCGACCGGGACGACGAGTCGCTTGCCAAACGGCACGAGGCAGCGGTaaaggaggaggcgcgcgaggcCGAGGGCGAAGACCTGGCCAGCGTCTCCGAAATTCTCGACAACGCCAGCCAACAGTACCAACAGTTCCAGTCGCAGTACATGAGCGACGAGGAGGGCCTGGTCGCCTCGACGAGCGACTGCAACCAGTCGGGCAGCGACGAAAAATCCGACTCCGTCAACTCGGTCAACTCCGGCTCCTCCTCGATCTCCCGCAGGAAGCGCAAGAAGATGAAGAAAGTGAAGAAGctgatgaagaagaagaagaacaaGTCCGCGTACTCCATGGCGCCGAACCGCGTGATCTGCCCGTACTGCGAGCGGCCGTTCCCGTGGACCTCGTCGCTTCGCCGTCACATCCTCACACACACCGGGCAGAAGCCCTACCGCTGCGAGCACTGCAGCCTCCTCTTCACGACCAAGTCGAACTGCGACCGCCACCTGCTCAGAAAGCACAAGGCAAAGGCGAACAAgatacggcgcgcgcgcagcacCTCCTCGCCGGAGCTGCAGGAGGCCCCGGCGAGCCTGGTCGCACCTGTCCCCAGCAGCATCCCCGCCGTGGCCGCCGTCAGCAACGGCGtgtccgccgccgccgctgccgccagCCAGTTCTCCATGCGCAATGTGCCCGAGCGCCCGTACAAGTGCAACCAATGCCCCAGCTCGACCTTCTCCACCCTGGGCAACCTGAAGAAGCACCGCTCGCAGAAGCACCCGCGCAGCTTCAACTCCAAGTCGAGCCCCGGCTCGCCCTCCAGCGAGCACCAGCTCAGCCCGCAGGACTGCCACGACAGCCCGCTGGACTCGCCCCGACGCGACTGCCCGCAGGACTCGCCGCGGCGGAACTCCACCGGCGCCGCGAAGAACGACCAGAGCGACCACGAGAGCCAGTCCTCCAGCGTCTCCGAGCACGCCATCGAGCAACATCACACCGAGACTGCTAAATTGGCCAACGGCGCGATCGACGCCTCCAAGTCCAGGAGGACGTCGCCCAGGGCCTCCCCGGGTCCGGCAAACAACGAGACACCGTTCAAGTGCCACCTCTGCGACAGCGGATTCGCCGAGCGCCAAGACTGCCTGGACCACCTCAAGGAAAATCACGAGCGCTCGTACGAGATGCTGGTTGCTAAAGGGGCACTCGACATGGACATCGACGCGCAGGACGAACCCATGCCACCCGTACCACCACCCAGCGACGGCGAGGAGAGACGCGGCAGGTTCCCCGACTACAGCAACCGAAAGGTAATTTGTGCATTTTGCCTTCGACGCTTCTGGTCAGCTGAGGACCTCCGCCGTCACATGCGCACGCACACGGGCGAGCGTCCGTTCTCCTGCGACATCTGCTGCCGGCGCTTCACGCTGAAGCACAGCATGCTACGCCACCGCAAGAAGCACGAGTCCGTGGACTCGAGCATGTACGTGGGCATGAgcggcgaggaggaggagaacgGCGCGGTCGCCGCCGCTGCCCCCATGAGCCAGCCGACGACGATAGCGCCGCGCTCGCAACAGAATTCGTCGGCGCCCACCGGCCGCCACCAGGACCGCGCCTCCCTGCCCCAGGTGGTCAGCGTCGCCACCGCCGACTCCGCCCCCTCCAACGTCATGAGGTTCAACCCCTACGAGAAGCTGACGACCCTGGCGAGCAAGCTGACGTCCGGCATATCGGTCGGCCTCGCCGTCGACGCCAACGACAACACCGAGGACGACCTCATCTGCAACCTGCTCGGCGTACGCGACAAGAAGTTAATGGACCGTGTGCTCCAGGCCTCTGCCGACGACGCCGCCATGCTCCTTGGCGTCAAGGGCAACCACGAATGA
Protein Sequence: MSEIAVEPPPSVGMDFSVKVTAETGPDQRDGRSESQTDVASSPVVEQPEGSHPCPACPLVLPSSRELTTHLRGHNSPRGSTDSGEEADYACGVCRKVLSSASSLDRHVLVHSGERPFKCKHCDMAFTTNGNMNRHLRTAHCSASPGQHSCTDSDGSSDSERPRTTGSNHIHEEYNNNEVATERKSPALKRKCPDYADEVEVQQRRHKILLGAYADLDSRYPGSYGCAVCGRGDFASDAQLEAHMERQHPESQPRCEPCNQVFKNHCAFNVHRYVSHCRETESPRSLRNSVVGFNDLTFVDFSAVKFPAIARAVCERSLHRPASGETPRYQCSKCLRAFPCRSALDGHESDCGLQPPTEQRGHGPEDQSLRDDFFAGLDLQNKAALVEAKEGKDLADIQSIISVTSGPILQNFSRSDAGTPDNCKLSRQGFGSSGSSGTPSSECLDEEGQEMFAAEFRKMKLKGEFPCRLCKAVFPNLRALKGHNRAHMGVPAGLPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSICNYAFTTKANCERHVRNRHGKLSRDEIKSVLIYHPSEDSANDAAGLEAGSPRPGLARDEVRKALVYPPEREETSQPPHYPSAEIRVKDEAKLRQPGLVSLGLGLPGYDKAELFPRPLDVAAVNYEQTKSHHEDDMDSRSSTGSVSLVSETKSEAHERAQTGPIDLKKPSEESAEQSTHGEDAPLDLSMDVLDLSRKANAEAAAAAAASAAVAASKEREGDETYAAADPSLKENSFYSSANQLLLTQALLKAGQAQPSSLERFYANAHMLYQNFGSFSAVGAGILQPYLFGPHLFGQDFAMKDRLQKGLVRGLQTSGGSLVEPAGSGSSYTPVFPQARNDQPDYLRQQGVAPGPSRDNHDSGSSANSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCNAKFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRPPANPPTLLQSLRQSPISHAYGGLLPRLGQDALRKHAISDQVKYAILAQQLKGNKTEENDTDEELVIDEEEAAAAAREPTERTLSLLRGKLEANLESKAGDSSLAVNHREEGANESIKREVEDAEEEPAVEIHDMKRETSSDRDDESLAKRHEAAVKEEAREAEGEDLASVSEILDNASQQYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSVNSVNSGSSSISRRKRKKMKKVKKLMKKKKNKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYRCEHCSLLFTTKSNCDRHLLRKHKAKANKIRRARSTSSPELQEAPASLVAPVPSSIPAVAAVSNGVSAAAAAASQFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSQKHPRSFNSKSSPGSPSSEHQLSPQDCHDSPLDSPRRDCPQDSPRRNSTGAAKNDQSDHESQSSSVSEHAIEQHHTETAKLANGAIDASKSRRTSPRASPGPANNETPFKCHLCDSGFAERQDCLDHLKENHERSYEMLVAKGALDMDIDAQDEPMPPVPPPSDGEERRGRFPDYSNRKVICAFCLRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSSMYVGMSGEEEENGAVAAAAPMSQPTTIAPRSQQNSSAPTGRHQDRASLPQVVSVATADSAPSNVMRFNPYEKLTTLASKLTSGISVGLAVDANDNTEDDLICNLLGVRDKKLMDRVLQASADDAAMLLGVKGNHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00713137; iTF_01381565; iTF_01380822; iTF_00713852;
90% Identity: iTF_01381565;
80% Identity: -