Basic Information

Insect: Eurytoma adleriae
Gene Symbol: RREB1
Assembly: GCA_900480045.1
Location: UXGC01000023.1:593866-608566[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.015 1.6 10.0 0.0 1 23 39 61 39 61 0.96

2 16 0.0014 0.15 13.3 0.0 1 23 76 98 76 98 0.97

3 16 2.1e-06 0.00022 22.2 2.6 1 23 104 127 104 127 0.98

4 16 0.015 1.5 10.1 0.1 1 23 208 232 208 232 0.90

5 16 0.12 12 7.3 1.7 2 23 238 260 238 260 0.91

6 16 1.4 1.5e+02 3.8 0.5 1 19 313 331 313 333 0.90

7 16 0.2 21 6.5 0.2 1 23 449 471 449 471 0.96

8 16 3.5e-05 0.0037 18.3 0.6 1 23 480 502 480 502 0.98

9 16 0.00039 0.042 15.0 2.5 1 23 508 531 508 531 0.97

10 16 0.00024 0.026 15.7 3.1 1 23 899 922 899 922 0.97

11 16 0.00075 0.08 14.1 0.1 3 23 1198 1218 1196 1218 0.97

12 16 0.33 35 5.8 6.5 1 23 1224 1247 1224 1247 0.97

13 16 0.044 4.7 8.6 1.8 1 23 1313 1337 1313 1337 0.94

14 16 1.3 1.3e+02 4.0 1.9 1 23 1445 1468 1445 1468 0.91

15 16 0.013 1.4 10.3 0.4 2 23 1515 1536 1514 1536 0.94

16 16 0.00094 0.1 13.8 5.1 1 23 1542 1564 1542 1564 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.015	1.6	10.0	0.0	1	23	39	61	39	61	0.96
2	16	0.0014	0.15	13.3	0.0	1	23	76	98	76	98	0.97
3	16	2.1e-06	0.00022	22.2	2.6	1	23	104	127	104	127	0.98
4	16	0.015	1.5	10.1	0.1	1	23	208	232	208	232	0.90
5	16	0.12	12	7.3	1.7	2	23	238	260	238	260	0.91
6	16	1.4	1.5e+02	3.8	0.5	1	19	313	331	313	333	0.90
7	16	0.2	21	6.5	0.2	1	23	449	471	449	471	0.96
8	16	3.5e-05	0.0037	18.3	0.6	1	23	480	502	480	502	0.98
9	16	0.00039	0.042	15.0	2.5	1	23	508	531	508	531	0.97
10	16	0.00024	0.026	15.7	3.1	1	23	899	922	899	922	0.97
11	16	0.00075	0.08	14.1	0.1	3	23	1198	1218	1196	1218	0.97
12	16	0.33	35	5.8	6.5	1	23	1224	1247	1224	1247	0.97
13	16	0.044	4.7	8.6	1.8	1	23	1313	1337	1313	1337	0.94
14	16	1.3	1.3e+02	4.0	1.9	1	23	1445	1468	1445	1468	0.91
15	16	0.013	1.4	10.3	0.4	2	23	1515	1536	1514	1536	0.94
16	16	0.00094	0.1	13.8	5.1	1	23	1542	1564	1542	1564	0.97

Sequence Information

Coding Sequence: ATGGATTTCTCCATCAAAGTGACTGCCGAGACTGGACCCGATCAGCGCGACTGCCGCAGCGAGAGTCAAACGGATGTTGCATCATCACCAGTGGTCGAGCAGCCGGAAGGTAGTCACCCGTGCCCGGCGTGTCCCCTGGTGCTGCCGAGTTCCCGCGAGCTGACGACGCACCTGCGCGGCCACAACTCCCCGCGCGGCAGCACGGACAGCGGCGAGGAGGCCGACTACGCCTGCGGCGTCTGCCGCAAGGTACTGAGCTCTGCGAGCTCCCTGGACCGCCACGTCCTCGTGCACTCGGGCGAGCGGCCCTTCAAGTGCAAGCACTGCGAGATGGCCTTCACGACGAACGGCAACATGAACAGGCATCTGCGCACCGCCCACTGCTCCGCCTCACCGGGCCAGCACAGCTGCACCGACTCCGACGGCAGCAGCGACAGCGAGCGGCCCCGCACTACCGGCAGCAACCACATCCACGAGGAGTATAATAACAACGAGGTGGCGACCGAGCGCAAGTCGCCCGCCCTCAAGCGCAAGTGCCCGGACTACGCGGACGAGGCCGAGACCCAACAGCGTCGCCACAAGATCCTCCTCGCCGAGCTCGACGCCCGCTACCACAGCTCCTACAGCTGCGCCGTCTGCGGACGCGGCGGCTTCTCCAGCAGCAGCGACCTCGAGGCCCACATGGGGCGCCGGCATCCCGAGAGCCAGCCCCGCTGCGAGCCCTGCAACCAGGTGTTCAAGAGCCACCGGGACTTAAACCTGCACCGCTATGTTAACCACTGCCGCGAGGCCGAGAGCCCGCGCAGCCTGCGCAACTCCGTCGTCGGCTTTAACGACCTGACCTTCGTCGACTTCTCCGCGGTCAAGTTCCCGGCGATCGCCCGGGCCGCCTGCGAGCGCGCCATGCACCGCCCGGCCTCGGGGGAGACGCCGCGCTACCAGTGCTCCAAGTGCCTGCGCGCCTTCCCCTGCCGCTCGGCCCTCGACGCCCACGAGAGCGACTGCGGCCTGCTGCCGCCGTCGGAGCCGCGGGGCCACGGGCCCGAGGACCAGTCTCTGCGCGACGACTTCTTCGCCGGTCTGGACCTGCAGAACAAGGCGGCCCTCGCCGAGGCCAAGGAGGGCAAGGACCTCGCCGACATCCAGAGCATCATCTCCGTCACATCCGGCCCGATTCTGCAGAGCTTCTCGCGCTCGGACGCCGGTACGCCGGACAATTGCAAGCTGTCGCGGCAGGGATTCGGCTCGTCCGGCTCCTCCGGCACGCCCAGCTCCGAGTGCCTCGACGAGGAGGGCCAGGAGATGTTCGCCGCCGAGTTCCGCAAGATGAAGCTGAAGGGCGAGTTCCCCTGCAGGCTGTGCACGTCGGTGTTCCCGAACCTGCGCGCCCTCAAGGGCCACAACAGGGCGCACATGGGGGTGCCCGCGGGTCTGCCCTATCCCTGCAACATGTGCCCCTACAGCAGCACCGACAAGACCACGCTGGTGCGCCACCTGCGCTCGCACAACGGCGACCGGCCGTACGAGTGCTCCATCTGCAACTATGCCTTCACGACCAAGGCCAACTGCGAGCGTCACGTGAGAAACAGGCACGGCAAGCTGTCGCGCGAGGAGATCAAGAGCGTACTCATCTACCACCCGAGCGAGGACTCGGCGAACGACGCCGCGGGCCCGGAGGCGGGCTCGCCCAGGTCGGGCGGGGCGCGCGACGAGGTGCGCAAGGCCCTGGTCTACCCGCCCGAGCGCGAGGAGACGTCGCAGCCGCCGCACTACCCGCCGGCGGAGATCCGCGTGAAGGACGAGGCGAAGCTCAGGCAGCCCGGACTGGCCAGCCTGGGCCTCGCTCTCCCCGGCTACGACAAGGCCGAGATCTTCCCGCGGCCGCTGGAGGTCGCAGCCGCGAGCTACGAGCAGCCCAAGTCACAACACGAGGACGAAATGGACTCGCGCTCCTCGACAGGCAGCGTTTTTCTAATCAACGAAAACAAATCCGACGCGATCCAGACGGGCCCGATCGACCTGAAGAAGACGACGGAGGAGGCCGTGAAGCAGCCTGCCCACGGTGAGGACGCACCACTGGACCTCTCCATGGACGTTCTCGACCTCAGCAGAAAGGCCAATGAGGCGGCCGCTGCGGCCGCCGCGGTTTCGGCTGCCATGGCTGCAGCGACGGAGGGCGAAGGCGACGAGCCCTACGCCACAGCGGACCCCAGCCACaaacaaaatactttttttagtcCAAATAATCTGCTCCTCACACAGGCGTTGATGAAGGCCGGCCACGTCCAATCTTCGTCACTTGAGAACTTTTATGCGAACGCCCACTTGCTATATCAAAACTTCGGCAACTTCTCGGCCGTAGGCGCTGGTATCCTCCAGCCGTACCTATTTGCGCCACAATTATTCTCTCAAGATTTCGCGATGAAGGACCGTCTGCCGAAGGGATTGGTGCGCGGCTTGCAGACTAGCGGCGGTAGCCTAGTCGAGCCCGCCGACAGCGGGCCCAGCTACGCGCCCGTCTTTCCCCAGACCCGCAACGACCAGCCGGACTACCTGAGGCAGCAGGGCGCGGCACCTGGGCCCTCCAGAGACAATCACGACTCCGCGACGAGCGCCAACTCCGTCAAGATGGTAATAAAGAACGGCGTGCTGATGCCGAAGCAGAAGCAGCGAAGATACCGCACCGAGCGACCTTTCACCTGCGAGCACTGCAATGCAAAGTTCACCCTGCGCAGCAACATGGAGCGCCACATCAAACAACAGCATCCACAGTACTGGAGCCAGCGCCCTAGAGGCGGACACTCGACCAGAGGTCGCCCACCCGCGAATCCCCCGACGCTCTTGCAGAGCCTGAGGCAGTCGCCGATTTCCCATGCGTACGGCGGCGGCCTCTTGCCGAGGCTTGGACAAGATCCGTTGAGAAAGCATGCCATTTCCGATGAGGTCAAGTACGCGATCCTGGCACAACAACTCAAGGGTAATAATAAGACAGAGGAAAACGACACGGAAGAAGAGCTGGTGATCGACGAAGAAGCGGCTGCAGCGGCGAGAGAGCCCACTGAAAGGACTCTGAGCCTGCTGAGGGGCAAGCTCGAAGCTAATCAAGAATCTAAAACCGGAGAGAGCAGTGGCGCCGTCAACCACCCGGAGGAGGGCGCGAACGAATCAGTCAAGCGAGAGATCGAGGATGCCGAAGAAGAGCCTGCGGTTGACGCTCGCAATATGAAGAGGGAGCCCTCCAGCGACCAGGATGACGAGTCGCTTGCCAAACGGCACGAGGCGACAGTGAAGGAAGAGGCGCGCGAGGCCGAGGGCGAAGACCTGGCCAGCGTCTCCGAGATCGTAGACAACGCCAGCCAACAGTACCAACATTTCCAGCCGCAGTACATGAGCGACGAGGAAGGCCTGGTCGCCTCGACGAGCGACTGCAACCAGTCGGGCAGCGACGAAAAATCCGACTCCGTCAACTCCGTAAACTCGGGCTCTTCCTCCGTCTCCCTCAAGAAGCGCAAGAAGATTAAGAAGGTGAAGAGGCtccagaagaagaagaagaacaaGTCCGCGTACTCCATGGCGCCGAACCGCGTGATCTGCCCGTACTGCGAGCGGCCGTTCCCGTGGACCTCGTCGCTGCGCCGCCACATCCTCACGCACACCGGCCAGAAGCCCTACCGCTGCGAGCACTGCAGCCTCCTTTTCACGACCAAGTCGAACTGCGACCGTCACCTGCTCAGGAAGCACAAGGCCAAGGCGAACAaggtgcgccgcgcgcgcagcacCTCCTCGCCGGAGCTGCAGGAGGCCCCGCCGAGCCTGGTCGCACCCGTGCCCAGCAGCATTCCCGCCGTGGCCGCCGTGACCGCCGTCAGCAACGGcgtggccgccgccgccgcggccgccagCCAATTCTCTATGCGCAACGTGCCCGAGCGCCCGTACAAGTGCAACCAGTGCCCCAGCTCGACCTTCTCCACCGTGGGCAACCTGAAGAAGCACCGCTCGCAGAAGCACCCGCGCAGCTTCAACTCCAAGTCGAGCCCCGGCTCGCCCTCCTGCGAGCACCAGCACAGCCCGCAGTACTGCCACAACGACAGCCCGCAGGGCTCGCCCCGGCAGGACTGCCCGCACGACTCGCCGCGGCGGAACTCCACCGGCGCCGCGAAGAACGACCAAAGCGACCACGAGAGCCAGTCCTCTGGCGTCTCCGAGAATGCCGCTGAGCAGCATTACGCCCAGGCTACCAAAGTGGCCGGTGCCAACGGCGCGATCGACGCCAAGTCCAGCAGAACGTCGCCCAGGGCCTCCCCGGGACCGGGAAACAGCGAGACGCCGTACAAGTGCCACCTCTGCGACAGCGGATTCGCCGTGCGCGATGACTGCCTGGACCACATCAAGGACAATCACGAAGACTCGTACGGGCTGCTGGTCGCTAAAGGAGCACTCGAGATGGAAATCGAACCGCAGGACGATCCCATGGCTCCCGGACCCAGTGACGGCGAGGAGAGGCGCGGCAGGTTCCCCGATTACAGCAACCGCAAGGTTGTTTGCGCATTTTGCATGCGTCGCTTCTGGTCAGCGGAGGACCTCCGCCGTCACATGCGCACGCACACGGGCGAGCGTCCGTTCTTCTGCGACATCTGCGGCCGGCGCTTCACGCTGAAGCACAGCATGCTGCGCCACCGCAAGAAGCACGAGTCCACGGGCTCGAGCATGTACGTGGGCATGAgcggcgaggaggaggagaacgGCGCAATCGCCCCCATGAGCCAGCCGACGTCGCGCTCGCAGCCCCAGGTGGCTAGCGTCGCCGACGTCTACGGCAAGCTGTCGAACCTGGCGAACGCTAAGCTAACGGCCGGCCTGGCCGTCGACGCCAACGAGAACACGGACAACGACCTCATCTCCAACCTGCTCGGCATCCAAGACAAGAACTTCCTCGAGCGCGTGCTCCAGGCCTCCGCCGACGACGCCGCCAAGCTCCTCGGCGTCAAGGGCAACCACTAA
Protein Sequence: MDFSIKVTAETGPDQRDCRSESQTDVASSPVVEQPEGSHPCPACPLVLPSSRELTTHLRGHNSPRGSTDSGEEADYACGVCRKVLSSASSLDRHVLVHSGERPFKCKHCEMAFTTNGNMNRHLRTAHCSASPGQHSCTDSDGSSDSERPRTTGSNHIHEEYNNNEVATERKSPALKRKCPDYADEAETQQRRHKILLAELDARYHSSYSCAVCGRGGFSSSSDLEAHMGRRHPESQPRCEPCNQVFKSHRDLNLHRYVNHCREAESPRSLRNSVVGFNDLTFVDFSAVKFPAIARAACERAMHRPASGETPRYQCSKCLRAFPCRSALDAHESDCGLLPPSEPRGHGPEDQSLRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPILQSFSRSDAGTPDNCKLSRQGFGSSGSSGTPSSECLDEEGQEMFAAEFRKMKLKGEFPCRLCTSVFPNLRALKGHNRAHMGVPAGLPYPCNMCPYSSTDKTTLVRHLRSHNGDRPYECSICNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSANDAAGPEAGSPRSGGARDEVRKALVYPPEREETSQPPHYPPAEIRVKDEAKLRQPGLASLGLALPGYDKAEIFPRPLEVAAASYEQPKSQHEDEMDSRSSTGSVFLINENKSDAIQTGPIDLKKTTEEAVKQPAHGEDAPLDLSMDVLDLSRKANEAAAAAAAVSAAMAAATEGEGDEPYATADPSHKQNTFFSPNNLLLTQALMKAGHVQSSSLENFYANAHLLYQNFGNFSAVGAGILQPYLFAPQLFSQDFAMKDRLPKGLVRGLQTSGGSLVEPADSGPSYAPVFPQTRNDQPDYLRQQGAAPGPSRDNHDSATSANSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCNAKFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRPPANPPTLLQSLRQSPISHAYGGGLLPRLGQDPLRKHAISDEVKYAILAQQLKGNNKTEENDTEEELVIDEEAAAAAREPTERTLSLLRGKLEANQESKTGESSGAVNHPEEGANESVKREIEDAEEEPAVDARNMKREPSSDQDDESLAKRHEATVKEEAREAEGEDLASVSEIVDNASQQYQHFQPQYMSDEEGLVASTSDCNQSGSDEKSDSVNSVNSGSSSVSLKKRKKIKKVKRLQKKKKNKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYRCEHCSLLFTTKSNCDRHLLRKHKAKANKVRRARSTSSPELQEAPPSLVAPVPSSIPAVAAVTAVSNGVAAAAAAASQFSMRNVPERPYKCNQCPSSTFSTVGNLKKHRSQKHPRSFNSKSSPGSPSCEHQHSPQYCHNDSPQGSPRQDCPHDSPRRNSTGAAKNDQSDHESQSSGVSENAAEQHYAQATKVAGANGAIDAKSSRTSPRASPGPGNSETPYKCHLCDSGFAVRDDCLDHIKDNHEDSYGLLVAKGALEMEIEPQDDPMAPGPSDGEERRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFFCDICGRRFTLKHSMLRHRKKHESTGSSMYVGMSGEEEENGAIAPMSQPTSRSQPQVASVADVYGKLSNLANAKLTAGLAVDANENTDNDLISNLLGIQDKNFLERVLQASADDAAKLLGVKGNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00714624;
90% Identity: -
80% Identity: -