Basic Information

Insect: Sycophila quercilanae
Gene Symbol: RREB1
Assembly: GCA_035582995.1
Location: JAWWEP010000001.1:16673481-16679127[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.013 1.5 10.2 0.0 1 23 36 58 36 58 0.96

2 14 0.0012 0.14 13.4 0.0 1 23 73 95 73 95 0.97

3 14 1.8e-06 0.00021 22.3 2.6 1 23 101 124 101 124 0.98

4 14 0.31 35 5.8 0.0 1 23 210 234 210 234 0.89

5 14 0.61 69 4.9 1.9 2 23 240 262 240 262 0.91

6 14 1.3 1.5e+02 3.9 0.5 1 19 315 333 315 335 0.90

7 14 0.041 4.7 8.6 0.1 1 23 452 474 452 474 0.96

8 14 2.5e-05 0.0028 18.7 0.3 1 23 483 505 483 505 0.98

9 14 0.00034 0.039 15.2 2.5 1 23 511 534 511 534 0.97

10 14 0.00021 0.024 15.8 3.1 1 23 908 931 908 931 0.97

11 14 0.00065 0.074 14.3 0.1 3 23 1212 1232 1210 1232 0.97

12 14 0.29 33 5.9 6.5 1 23 1238 1261 1238 1261 0.97

13 14 0.016 1.8 9.9 2.1 1 23 1323 1347 1323 1347 0.94

14 14 9.1 1e+03 1.2 2.7 1 23 1459 1482 1459 1482 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.013	1.5	10.2	0.0	1	23	36	58	36	58	0.96
2	14	0.0012	0.14	13.4	0.0	1	23	73	95	73	95	0.97
3	14	1.8e-06	0.00021	22.3	2.6	1	23	101	124	101	124	0.98
4	14	0.31	35	5.8	0.0	1	23	210	234	210	234	0.89
5	14	0.61	69	4.9	1.9	2	23	240	262	240	262	0.91
6	14	1.3	1.5e+02	3.9	0.5	1	19	315	333	315	335	0.90
7	14	0.041	4.7	8.6	0.1	1	23	452	474	452	474	0.96
8	14	2.5e-05	0.0028	18.7	0.3	1	23	483	505	483	505	0.98
9	14	0.00034	0.039	15.2	2.5	1	23	511	534	511	534	0.97
10	14	0.00021	0.024	15.8	3.1	1	23	908	931	908	931	0.97
11	14	0.00065	0.074	14.3	0.1	3	23	1212	1232	1210	1232	0.97
12	14	0.29	33	5.9	6.5	1	23	1238	1261	1238	1261	0.97
13	14	0.016	1.8	9.9	2.1	1	23	1323	1347	1323	1347	0.94
14	14	9.1	1e+03	1.2	2.7	1	23	1459	1482	1459	1482	0.82

Sequence Information

Coding Sequence: atgcTTGCAGTGACTGCCGAGACTGGACCCGATCAGCGCGACGGCCGCAGCGAGAGCCAAACGGATGTTGCATCATCACCAGTGGTCGAGCAGCCGGAAGGTAGCCACCCGTGCCCGGCGTGTCCCCTGGTGCTGCCGAGTTCCCGCGAGCTGACGACGCACCTGCGCGGTCACAACTCGCCGCGCGGCAGCACCGACAGCGGCGAGGAGGCCGACTACGCCTGCGGCGTCTGCCGCAAGGTCCTCAGCTCCGCGAGCTCCCTCGACCGCCACGTCCTCGTGCACTCCGGCGAGCGGCCCTTCAAGTGCAAGCACTGCGAGATGGCCTTCACCACCAACGGCAACATGAACAGGCACCTGCGCACCGCCCActgctcctcctcctcgcccgGCCAGCACAGCTGCACCGACAGCGACGGCAGCAGCGACAGCGAGCGGCCCCGCACCACCGGCAGCAACCACATCCACGAGGAGTACAACAACAACGAGGTCGCCGCCGAGCGCAAGTCGCCCACCCTCAAGCGCAAGTGTCCCGACTACGCCGACGAGGCCGAGTCCCAGCAGCAGCGCCGTCACAAGATCCTCCTCGAGACCTACGCCGAGGTCGACGGCCGCTACGCCGGCGGCTACAGCTGCGCCGTCtgcggccgcggcgacttcACCAGCGGCGGCCAGCTCGAGGCCCACATGGAGCGCCAGCACCCCGAGAGCCAGCCCCGCTGCGAGCCCTGCAATCAGGTATTCAAGAGCCACCGGGCCTTCAACCTCCACCGCTACGTCAGCCACTGCCGCGAGCCCGAGAGCCCGCGCAGCCTCCGCAACTCCGTCGTCGGCTTCAACGACCTCACCTTCGTCGACTTCTCCGCCGTCAAGTTCCCGGCTATAGCCCGGGCCGCCTGCGAGCGCGCCCTCCACCGGCCTGCCTCCGGCGAGACGCCACGCTACCAGTGCTCCAAGTGCCTGCGCGCCTTCCCCTGCCGCTCGGCCCTCGACGCCCACGAGACGGACTGCGGCCTGCTACCGTCGGCGGAGCACCGGGCCCACGGGCCCGAGGACCAGTCGCTGCGCGACGACTTCTTCGCCGGCCTCGACCTCCAGAACAAGGCGGCCCTCGCCGAGGCCAAGGAGGGCAAGGACCTCGCCGACATCCAGAGCATCATCTCCGTCACCTCGGGCCCGATCCTCCAGAGCTTCTCGCGCTCGGACGCCGGCACGCCGGACAACTGCAAGGCTCTCTCCAGGCAGGGCTTCGGCTCGTCCGGCTCCTCCGGGACGCCCAGCTCCGAGTGCCTCGACGAGGAGGGCCAGGAGATGTTCGCCGCGGAGTTCCGCAAGATGAAGCTGAAGGGCGAGTTCCCCTGCAGGCTCTGCAAGGCCGTGTTCCCGAACCTGCGGGCTCTCAAGGGCCACAACAGGGCGCACATGGGGGTGCCCGCGGGTCTTCCCTACCCCTGCAACATGTGCCCCTACAGTAGCACCGACAAGGCCACTCTTGTGCGCCATCTGCGCTCCCACAACGGCGACCGGCCGTACGAGTGCTCCATCTGCAACTACGCCTTCACGACCAAGGCCAACTGCGAGCGGCACGTGAGGAACAGGCACGGTAAGCTCTCCCGCGAGGAGATCAAGAGCGTCCTGATCTACCACCCGAGCGAGGACTCGGCGAACGACGCGGCGGGCCTGGACGGCGGCTCGCCCAGGCCCGGCCTGGCTCGCGACGAGGTGCGCAAGGCCCTGGTCTATCCTGGCGAACGGGAGGAGCTGTCCCAGGCCCATTACCCAACGGCGGAGATCCGCGTGAAGGACGAGGCGAAGCTCAGGCAGCCCGCTCTGGCCGGCCTGGGCCTCGGACTCCCCGGCTACGACAAGGCCGATCTCTTCCCGCGGCCGCTGGagctcgccgccgccgagcAGCAGCCGCCCAAGTCCCAGCACGAGGACGACATGGACTCGCGCTCGTCCGCCGGCAGCGTATCTCTAGTCAGCGAAACCAAATCCGAGGGGCAGCAGCGCGTCCAGGCGCGGCCGATCGACTTGAAGAAGCCGTCGCCGGAGGAGCCGCCGGCCGAGCAGCCGGCCGCCCACGGCGAGGACGCGCCCCTCGACCTCTCCATGGACGTCCTCGATCTCAGCCGGAAGGCCAACGCCGAAGcggccgcggccgccgccgccgccgccgccgtggcTGCCGCGAAGGAGCGCGAGAACGACGAGGCCTACGCCGCCGCTGACCCCAGCCACAAGCAGAACAACTTTTACAGCCCGACGAATCAGCTGCTACTGACGCAGGCTCTACTGAAGGCGAACCAGGCGCAGCCGTGCTCCCTCGAGAGGCTCTACGCCAACGCCCAAATGCTCTACCAGAACTTGGGCAGCTTCTCGGCGGTGGGTGCCGGCATCCTCCAGCCGTACCTCTTCGGACCGCACCTATTCGGCCAGGAGTTCGCCATGAAGGACCGCCTGCAGAAGGGCCTGGTGCGCGGCCTGCAGACCAGCGGCGGCAGCCTCGTCGAGCCCACCGCCAGCGGGCCCAGCTACGCCCCTGCCTTCCCCCACGCCCGCGCCGACCAGCCGGACTACCTGAGGCAGCAGAGCGTCGCGCCCGGACCCTCCAGGGACAACCACGACTCCGCCTCGAGCGCCAGCTCCGTCAAGATGGTCATCAAGAACGGCGTGCTGATGCCCAAGCAGAAGCAGCGCAGATACCGCACCGAGCGGCCCTTCACCTGCGAGCACTGCAACGCCAAATTCACCCTGCGCAGCAACATGGAGCGTCACATCAAGCAGCAGCATCCGCAATACTGGAGCCAGCGGCCCAGGGGTGGACACTCGACCAGAGGTCGCCCGCCCGCGAATCCTCCCACGCTGCTGCAGAGCCTGAGACAGTCGCCGATTTCACACGCCTACGGTGGCCTCCTGCCGAGGCTCGGACAAGACGCTTTGAGGAAGCATGCGATCTCCGATCAGGTGAAGTACGCCATCCTGGCGCAACAGCTGAAGGGTAACAACAAGACGGAGGAGAACGACACCGACGAGGAGCTGGTGATCGACGAGGAAGAAGCAGCAGCGGCCGCAGCGGCGCGGGAGCCCACCGAGAGGACTCTGAGCCTGCTGAGGGGCAAACTCGAGGCCAATCTCGAGTCCAGAGCCAGCGAGAGCATAAGCGACGCCGTCGCTCATCCGGAGGAGGGCGCGAGCGAGGCCATCAAGCGCGAGGCCGAAGAGGCCGACGAGGAGGAGCCAGCGGCCGAAGCTCGGGACACGAAGAGGGAGAGCACCTCCAGCGACCGGGACGACGAGTCCCTCGCCAAGCGGCACGAGGCGAGCGTGAAGGAGGAGGCGCGCGACGCCGAGGGCGAGGACCTCGCCAGCGTCTCCGAGATCCTGGACAACGCCAGCCAGCAGTACCAGCAGTTCCAGTCGCAGTACATGAGCGACGAGGAGGGCCTGGTCGCCTCCACGAGCGACTGCAACCAGTCCGGCAGCGACGAGAAATCCGACTCCGTGAACTCCGCCAACTCCGGCTCCTCCTCCGTATCCCGCAAGAAGCGCAAGAAGATGAAGAAGGTGAAGAAGatgatgaagaagaagaagaacaaGTCGGCGTACTCGATGGCGCCCAACCGCGTCATCTGCCCGTACTGCGAGCGGCCGTTCCCCTGGACCTCGTCGCTGCGCCGCCACATCCTCACGCACACCGGCCAGAAGCCCTACCGCTGCGAGCACTGCAGCCTCCTCTTCACCACCAAGTCGAACTGCGACCGCCACCTGCTCAGAAAGCACAAGGCCAAGGCGAACAAAGTGCGCCGCGCCCGCAGCACCTCGTCGCCCGAACTCCAGGAGGCCCCGGCGAGCCTCGTCGCGCCCATCCCCAGCAGCATACCCGCCGTGGCCGCCGTCAGCAACGGCAtgtccgccgccgccgccaacAACCAGTTCTCCATGCGCAACGTGCCCGAGAGGCCGTACAAGTGCAACCAGTGCCCCAGCTCGACCTTCTCCACCCTGGGCAACCTCAAGAAGCACCGCTCGCAGAAGCACCCGCGCAGCTTCAACAACTCCAAGTCCAGTCCCGGCTCGCCCTCCAGCGAGCACCAGAACAGCCCGCAGGACTGCAGCCACAACGACAGCCCCCAGGACTCGCCCAGGCAGGACTGCCCGCAGGACTCGCCGCGGCGGAACTCCACCGGCGCCGCGAAGAACGAGCAGAGCGACCACGAGAGCCAGTCCTCCGGGCTCTCCGAGCACGCCTTGGAGCAGCAGCATCAGGCCGAGGTCGCCAAGCTGGCCAGCCTGAACGGCGCGATCGACGCCGCCAAGTCCAGGAGGACGTCGCCCAGAGCGTCGCCGGGCCCGGGTAACAACGAGACGCCCTTCAAGTGCCACCTCTGCGACAGCGGATTCGCCGAGCGGCAGGACTGCCTGGACCATCTCAAGGACAATCACGAGCGATCCTACGAGATGCTCGTCGCCAAGGGCGCCCTCGACATGGACATTGACGCACAGGATGAGCCCATGCCGCCCGTGCCGCCGCCCAGCGACGGCGAGGAGAGACGCGGCAGGTTCCCCGACTACAGCAATCGAAAGGTAAATACCGCCTGA
Protein Sequence: MLAVTAETGPDQRDGRSESQTDVASSPVVEQPEGSHPCPACPLVLPSSRELTTHLRGHNSPRGSTDSGEEADYACGVCRKVLSSASSLDRHVLVHSGERPFKCKHCEMAFTTNGNMNRHLRTAHCSSSSPGQHSCTDSDGSSDSERPRTTGSNHIHEEYNNNEVAAERKSPTLKRKCPDYADEAESQQQRRHKILLETYAEVDGRYAGGYSCAVCGRGDFTSGGQLEAHMERQHPESQPRCEPCNQVFKSHRAFNLHRYVSHCREPESPRSLRNSVVGFNDLTFVDFSAVKFPAIARAACERALHRPASGETPRYQCSKCLRAFPCRSALDAHETDCGLLPSAEHRAHGPEDQSLRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPILQSFSRSDAGTPDNCKALSRQGFGSSGSSGTPSSECLDEEGQEMFAAEFRKMKLKGEFPCRLCKAVFPNLRALKGHNRAHMGVPAGLPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSICNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSANDAAGLDGGSPRPGLARDEVRKALVYPGEREELSQAHYPTAEIRVKDEAKLRQPALAGLGLGLPGYDKADLFPRPLELAAAEQQPPKSQHEDDMDSRSSAGSVSLVSETKSEGQQRVQARPIDLKKPSPEEPPAEQPAAHGEDAPLDLSMDVLDLSRKANAEAAAAAAAAAAVAAAKERENDEAYAAADPSHKQNNFYSPTNQLLLTQALLKANQAQPCSLERLYANAQMLYQNLGSFSAVGAGILQPYLFGPHLFGQEFAMKDRLQKGLVRGLQTSGGSLVEPTASGPSYAPAFPHARADQPDYLRQQSVAPGPSRDNHDSASSASSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCNAKFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRPPANPPTLLQSLRQSPISHAYGGLLPRLGQDALRKHAISDQVKYAILAQQLKGNNKTEENDTDEELVIDEEEAAAAAAAREPTERTLSLLRGKLEANLESRASESISDAVAHPEEGASEAIKREAEEADEEEPAAEARDTKRESTSSDRDDESLAKRHEASVKEEARDAEGEDLASVSEILDNASQQYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSVNSANSGSSSVSRKKRKKMKKVKKMMKKKKNKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYRCEHCSLLFTTKSNCDRHLLRKHKAKANKVRRARSTSSPELQEAPASLVAPIPSSIPAVAAVSNGMSAAAANNQFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSQKHPRSFNNSKSSPGSPSSEHQNSPQDCSHNDSPQDSPRQDCPQDSPRRNSTGAAKNEQSDHESQSSGLSEHALEQQHQAEVAKLASLNGAIDAAKSRRTSPRASPGPGNNETPFKCHLCDSGFAERQDCLDHLKDNHERSYEMLVAKGALDMDIDAQDEPMPPVPPPSDGEERRGRFPDYSNRKVNTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00714624;
90% Identity: iTF_01381565;
80% Identity: -