Basic Information

Gene Symbol
ZNF236
Assembly
GCA_900475205.1
Location
UXGB01000004.1:7980-14767[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.002 0.24 12.6 1.3 2 23 54 75 54 75 0.97
2 21 0.00013 0.016 16.3 0.6 1 20 76 95 76 98 0.96
3 21 1.3e-05 0.0015 19.6 0.4 1 23 104 127 104 127 0.96
4 21 0.0025 0.29 12.4 2.2 1 23 136 159 136 159 0.98
5 21 1.5e-06 0.00018 22.4 1.0 1 23 270 292 270 292 0.99
6 21 0.00049 0.058 14.6 3.1 1 23 298 320 298 320 0.98
7 21 0.0093 1.1 10.6 2.1 1 23 326 348 326 348 0.96
8 21 0.0084 0.99 10.7 6.6 1 23 420 442 420 442 0.98
9 21 1.7e-07 2e-05 25.5 3.1 1 23 448 470 448 470 0.98
10 21 1.8e-05 0.0021 19.1 3.8 1 23 476 498 476 498 0.97
11 21 0.0002 0.023 15.8 5.2 1 23 504 526 504 526 0.98
12 21 0.42 49 5.4 3.0 2 23 807 828 806 828 0.96
13 21 0.016 1.9 9.8 0.3 1 23 833 855 833 855 0.98
14 21 0.0013 0.15 13.3 5.0 1 23 861 883 861 883 0.97
15 21 5.5e-07 6.5e-05 23.9 0.9 3 23 917 937 916 937 0.98
16 21 6.4e-05 0.0075 17.4 2.7 1 23 943 965 943 965 0.99
17 21 6.7e-06 0.00079 20.4 0.6 1 23 971 993 971 993 0.98
18 21 4.1e-05 0.0048 18.0 2.3 1 23 999 1021 999 1021 0.98
19 21 7.9e-05 0.0092 17.1 3.2 1 23 1209 1231 1209 1231 0.98
20 21 2.2e-06 0.00026 22.0 2.2 1 23 1237 1259 1237 1259 0.98
21 21 2.3e-06 0.00027 21.9 2.4 1 23 1265 1288 1265 1288 0.96

Sequence Information

Coding Sequence
ATGAGGGAGTTCACGGCTGAGTGCTTTAACTTCGTTCTGCTGGCCACGTGCTCCAAGGTCTTTTACTTTGCGCTGGGACTCAGCGAGCTCTACTACAAGGCCCAGCTGGAGGCGCATCTGAAACTGCACAACGAAAAATGTTCGACGGACGAGCACCGGAAGTGCAAGCTCTGCCGCAAGCAGTTCTCCCAGCCCGCAGTCTACCGGCAACACTTGCGGGATCATTACAAATGCAATTTGTGCAATAGAGCGTTTACTCAAAAAGGTTCTGTAAGAATCCATATGTGGCAGCATAACGGAGTCAGGCCTTATAGTTGCAACCTTTGTAATGCTACATTTAGTCAAAAAGgaaatttaaattcacacGTAGAGCGGGTACACAAAGCGCAAGAAGGGTCGACTATGTATCGGTGTATGCAATGTCCgtgtatctttaaaaaattaggcAGCTTAAACGGCCATATGAAACGAATGCACGGGGATACCAGATCTGAGGAAATGCAGGACAGAGAAGAAGAAACGGTAGCACCCGTGGAAGGGGTGAACAACGTAGGGGACGAAGAATCTCAGCAGGTCGTGGACGATGCGGTTCCTACGAACGACCAGTTGCCGGAATCAGAACTCGAGGCTGAAGCAGCCAAAACGGGATGCGCCACTACGGAAACTCCCCAGAAATTCGAGGACGGTTTCGTCGTCACCGACAACACCGAGCAGACGGCGCTTGTCACGCTACTGGACAAAACATCCAACGATCCTCAGGGaaggTACATCAAGATAAAGCAACGATTTGTAAATAACTCTAGATTTTATGAATGCAATTTctgtgttaaaaaattcaaaaagccTTCCGATCTTATAAGGCATTTGAGAATTCATACGCAAGAAAAGCCATTTAAGTGCAAAACATGTAACCGgtcatttactttaaaatcgaCTATGTTGACGCACGAGAAGATTcacaaaaatacaaagaaattttcttgtcGTTTGTGTTATGcgtcttttaaatttcaaagtgaACTGACAGACCATGAAAAaTTTCACAAAGAGCAGCTGAAAgcggaggcaaaaaaaaatcagcaagAAGTTGGTAGGACGAAATCGTGTCAGCGTAAAAAACACTGTGGTCCCGAGGTGCAAAATCGGATCCCAGAAGTCGTGTTAAAAGAGCCGTTAGTGCTTACAGAAGCGGGCGACGGTATGCTGCATGCTCAGCCTAAGTATCGAAATGATATTGCCCATGGCAAAGGTAGACCGCATAAATGCTACGTCTGTCCAGCCGCTTTCATGAAGCTCAGTCATCTCAAGCAACATCATCGCAAACACACCGGGGAGCGACCCTATAATTGTCACTTATGCGATAGGAGTTTTTCAACCAATAGCGCATTAAAGGCTCATCGGCGAACGCACGATCTATTAAAACCGCACGAGTGTTCTATTTGTGGCATGACTTTTTCAACATTAAGTAGCATGAAAAGGCATCATATTACTCATACCAACAAAAGGCCATACATGTGCCCTTATTgtaacaaaacttttaaatcaaCAGTAAATTGCCGAAAACATATGAAACTACATAAACAAGAAATTGCACAACAGCAAGTAGAACTTGAAAAGAAACAACAACAATCTTCAAACTCAATTGTGAAGAACATAGAAACGATAGCATTCGCAGaacctatttttattaataatcagcAAATACTTCAACCAATTACTGCCAATGtacagcaaaatttaaatggtcAACTGCAAGCTGTAATTGGTGGTAAAGAAACGTCTTTTCTATCGAACCCTCAAGCCTCACAGAATCTTCTAAATACAAATGTAACCACAGTAGAAAATTCTAATATAAATTCGACACAAACATTGCATGCCAGTGAAACAGGTACTATTACCCTAGCTAACTATCCAGGAGACCAAACATTGACACCTGAAAACTTAAGACAACTTGAAGAAACACTGAATcaacagttttttaatattggattaaatattacacccaacaatacaaataaatcaattgaaaacAATGTCAATACTTTAGAAAATCGAGAAGCACCAACATTAAGCATAATCTACGATGAcggaaaaattttagaatcagCAATGAATACTTCTATTAATGCTGATAATGTTTTTGCTCAACagtttgataattttgatattggCCAAGTAACATTACAGaCTGATTCTCAAATAATGGGGATATCAAATACTAACTCAGATTTAACTAACATTTTACAGAATCAATTGTCTCAAACTCAAAGCTATACTGTGCAATTAGTTGATAATAATGTAGCAATTGATTCGGTTCTTAATCAGAATCacataaacaatgaaaaccaaaataatgaatctttACCAGGCTAtattaatcaaaatgaaaataataaaaattcagtcaTGAACAATCTTCACTGTCATACATGCAACATGGGAGGGTTTAACGTAGACAGTTTAAAGGAACACCTCAAAACACATCAAAACAAAGTATATGAATGCACTCAATGCCTTTCTAAATTTGATACAAACGAAGAACTTAGCGAACATGCAAAAGTTCACGAAAATCAAGAaaCTCATAAATGTTATGAATGTCACAAAGAATTTTCGACTACGTTGCAATTGCGAGAGCACATAAAGGAGCACGTTAAACATGAgttaaagcttaaaaatttagGAGTTGACGATATAATTGATTTTGAGTCTGAAAGCAATAAGGAAccagtaaataaaagaattaatatttgtcaATATTGTTCAAAAAGTTTCCGAAAACCTAGTGATCTCATTAGACACGTTAGAACGCACACCGGCGAAAAGCCATACCAGTGTCAGTATTGTGATAAAAGTTTCGCTGTTAAATGCACTTTAGATTCACATCTAAAAGTACATGCAGGTGAAAAAACATACTATTGTAACGTATGCAATACTATGTATGCAACAAGAGGAAGTTTGAAGGTGCATATGAGACTCCAtacaggtGATAGGCCATTTACATGTGAAATATGTAATATGACATTCCGTACCTCCGGCCATCGCAAAGTCCACATGATTTCCCATACCCGAGAACCAGGCTCTACCTcacgaaaatcgaaaaaaggcAAGACCGAAGGCGCAGAGCAGCCCAGTGAAAGCTTTATTCAGATGGTACAAGTACCCAACATTTACGAATGTCAACAGGATACCACTCAGaatcaaaatgtaaataccATAAcgattaattcaattacggaTCAGGTTACCCTGACATCAGATAATTCCATCTTAAGTGACGGTACTAATCTCCTCGCGTTGAATGAAAACAACCAGCTGGTACAGTTGTTGCTAGCAAATGGCCTCGTCACGATCCAAACGGATGATTCCATGATTTGCACCCAGCCGTCGGTAACAGAAAAAGTTTCAGAGAACAATTTTATAAGCTCACACGAACTGCAGAAAGAAACTAATCAGATAGTATATACCGCAGAATTGTCAAACGCGATACCACCTATAACGAATGCAAGCGACTACCAGTTAAACAACTGCATGGTCCTGCAGATGGGGAATGTTGATTCATCGACAATGAGCAATTCTGATGACGTCGATATTTTAAACGAAGCAAAAAGccttaaaaatataaaacacAAGTGCGATGTATGTGGTAAGGGATTCGCGAAACCGTGCCAGGTAGAGCGACACAAACGCACCCATACGGGCGAGCGACCCTTCCAGTGCGAAATCTGCAGCAAATCCTTCAGCCAAAAGTCGACTCTTCAGATGCACGAAAAGTACCATAAAGGTGATCGACCCCATGCCTGCCCACACTGCGAGCGTTCCTTCACCCAAAGCGGCAATCTTCTCACCCACCTTAGACGCGTTCACAAACTTGACCCGGCTGAGACGAAGCGTCTGCCGAAAGAACAACAGTTCGTTTTTTATGATCCAAAACTGCTGCAACAGAACATTGACGAATCACGTAATCTCTGCCTCGATGATATCTCGCTCAGCGAGTTACTTAAGTAA
Protein Sequence
MREFTAECFNFVLLATCSKVFYFALGLSELYYKAQLEAHLKLHNEKCSTDEHRKCKLCRKQFSQPAVYRQHLRDHYKCNLCNRAFTQKGSVRIHMWQHNGVRPYSCNLCNATFSQKGNLNSHVERVHKAQEGSTMYRCMQCPCIFKKLGSLNGHMKRMHGDTRSEEMQDREEETVAPVEGVNNVGDEESQQVVDDAVPTNDQLPESELEAEAAKTGCATTETPQKFEDGFVVTDNTEQTALVTLLDKTSNDPQGRYIKIKQRFVNNSRFYECNFCVKKFKKPSDLIRHLRIHTQEKPFKCKTCNRSFTLKSTMLTHEKIHKNTKKFSCRLCYASFKFQSELTDHEKFHKEQLKAEAKKNQQEVGRTKSCQRKKHCGPEVQNRIPEVVLKEPLVLTEAGDGMLHAQPKYRNDIAHGKGRPHKCYVCPAAFMKLSHLKQHHRKHTGERPYNCHLCDRSFSTNSALKAHRRTHDLLKPHECSICGMTFSTLSSMKRHHITHTNKRPYMCPYCNKTFKSTVNCRKHMKLHKQEIAQQQVELEKKQQQSSNSIVKNIETIAFAEPIFINNQQILQPITANVQQNLNGQLQAVIGGKETSFLSNPQASQNLLNTNVTTVENSNINSTQTLHASETGTITLANYPGDQTLTPENLRQLEETLNQQFFNIGLNITPNNTNKSIENNVNTLENREAPTLSIIYDDGKILESAMNTSINADNVFAQQFDNFDIGQVTLQTDSQIMGISNTNSDLTNILQNQLSQTQSYTVQLVDNNVAIDSVLNQNHINNENQNNESLPGYINQNENNKNSVMNNLHCHTCNMGGFNVDSLKEHLKTHQNKVYECTQCLSKFDTNEELSEHAKVHENQETHKCYECHKEFSTTLQLREHIKEHVKHELKLKNLGVDDIIDFESESNKEPVNKRINICQYCSKSFRKPSDLIRHVRTHTGEKPYQCQYCDKSFAVKCTLDSHLKVHAGEKTYYCNVCNTMYATRGSLKVHMRLHTGDRPFTCEICNMTFRTSGHRKVHMISHTREPGSTSRKSKKGKTEGAEQPSESFIQMVQVPNIYECQQDTTQNQNVNTITINSITDQVTLTSDNSILSDGTNLLALNENNQLVQLLLANGLVTIQTDDSMICTQPSVTEKVSENNFISSHELQKETNQIVYTAELSNAIPPITNASDYQLNNCMVLQMGNVDSSTMSNSDDVDILNEAKSLKNIKHKCDVCGKGFAKPCQVERHKRTHTGERPFQCEICSKSFSQKSTLQMHEKYHKGDRPHACPHCERSFTQSGNLLTHLRRVHKLDPAETKRLPKEQQFVFYDPKLLQQNIDESRNLCLDDISLSELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00713102;
80% Identity
-