Basic Information

Gene Symbol
ZNF236
Assembly
GCA_900480045.1
Location
UXGC01000026.1:552035-558858[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.0024 0.25 12.6 1.3 2 23 54 75 54 75 0.97
2 21 4.2e-06 0.00044 21.2 0.7 1 23 96 118 96 118 0.99
3 21 0.00016 0.017 16.3 0.6 1 20 124 143 124 146 0.96
4 21 1.5e-05 0.0016 19.5 0.4 1 23 152 175 152 175 0.96
5 21 0.0021 0.22 12.7 1.8 1 23 184 207 184 207 0.98
6 21 1.8e-06 0.00019 22.4 1.0 1 23 318 340 318 340 0.99
7 21 0.00057 0.06 14.5 3.1 1 23 346 368 346 368 0.98
8 21 0.011 1.1 10.5 2.1 1 23 374 396 374 396 0.96
9 21 0.0097 1 10.6 6.6 1 23 468 490 468 490 0.98
10 21 2e-07 2.1e-05 25.4 3.1 1 23 496 518 496 518 0.98
11 21 2.8e-06 0.0003 21.8 2.1 1 23 524 546 524 546 0.98
12 21 0.00023 0.024 15.8 5.2 1 23 552 574 552 574 0.98
13 21 0.055 5.8 8.3 0.2 1 23 880 902 880 902 0.98
14 21 0.0015 0.16 13.2 5.0 1 23 908 930 908 930 0.97
15 21 6.4e-07 6.8e-05 23.8 0.9 3 23 964 984 963 984 0.98
16 21 0.00017 0.018 16.2 2.4 1 23 990 1012 990 1012 0.99
17 21 7.8e-06 0.00083 20.4 0.6 1 23 1018 1040 1018 1040 0.98
18 21 4.7e-05 0.005 17.9 2.3 1 23 1046 1068 1046 1068 0.98
19 21 9.1e-05 0.0096 17.0 3.2 1 23 1256 1278 1256 1278 0.98
20 21 2.5e-06 0.00027 21.9 2.2 1 23 1284 1306 1284 1306 0.98
21 21 2.6e-06 0.00028 21.9 2.4 1 23 1312 1335 1312 1335 0.96

Sequence Information

Coding Sequence
ATGAGGGAGTTCACGGCTGACTGCTTTAACTTCGTCCTGCTGGCCACGTGCTCCAAGGTCTTTTACTTTGCGCTGGGACTGAGCGAGTTGTACTACAAGGCCCAGCTAGAGGCGCATCTGAAATTGCACAACGAAAAATGTTCGACGGACGAGCACCGGAAGTGCAAGCTCTGCCGCAAGCAGTTCTCCCAGCCCGCAGTCTACCGGCAACACTTGCGGGATCATTACAAACTGCAGACGAAATTCACAAAGCAGACCAAGTGGGGTGTCAGGCACAGGACCACCTACAAGTGCAAGATATGCATGAAGATGTTCGACAAGCCGAGTCAGCTGGTGCGACATATCAGAGTCCACACCGGTGAAAAACCGTACAAGTGCAATTTGTGCAACCGGGCGTTTACGCAAAAAGGTTCTGTAAGAATCCATATGTGGCAGCATAATGGAGTCAGGCCTTATAGTTGCAACCTTTGTAATGCTACATTTAGTCAAAAAGgaaatttaaattcacacGTAGAGCGGGTGCATAAAGCGCAAGAAGGCTCGACTATGTATCGGTGTATGCAATGTCCgtgtatctttaaaaaattaggcAGCTTAAACGGTCATATGAAACGAGTGCACGAAGGTACCAGATCTGAGGAAATGCAGGACAGAGAAGAAGAAACTTTAGCACCCGTGGAACGGGTGAACAACGTAGGGGAGGAAGAATCTCAGCAAGTCGTGGACGACACGGTTTCTACGAATGAGCAGCTGCCAGAATCAGAGCTTGCGTCTGAAACAGACAAAACGGAATGCGCCACTACGGAAACTCCCCAGAAATTCGAGGACGGTTTCGTCGTTACCGACAACACCGAGAAGACGGCGCTTGTCACGCTACTGGACAAAACATCCAGCAATCCTCAGGGaaagtACATCAAGATAAAGCAACGATTTGTAAATAACTCTAGGTTTTACGAATGCAatttttgtgttaaaaaattcaaaaagccTTCCGATCTTATAAGGCATTTAAGAATTCATACTCAAGAAAAGCCGTTTAAGTGCAAAACATGCAACCGatcatttactttaaaatcgaCTATGTTGACGCATGAGAAGATCCACAAAAacacaaagaaattttcttgtCGTTTGTGTTAtgcttcttttaaatttcaaagtgaACTGACAGACCATGAAAAATTTCACAAGGAGCAGCTGAAAGCGGAGGCAAACAAAAATCAGCAAGAAGTTGGTAGGACGAAATCCTGTCAGCGTAAAAAACAGTGTGGTCCCGAGGTGCAAAATCGGATCCCAGAAGTCGTGTTAAAAGAGCCATTAGTGCTTACAGAAGCGGGCGACGGTATGCTGCATGCTCAGCCTAAGTATCGAAATGATATTGCCCATGGCAAAGGTAGACCGCACAAATGCTACGTCTGTCCAGCCGCTTTCATGAAGCTAAGTCATCTCAAGCAACATCACCGCAAACACACCGGGGAGCGACCCTATAATTGTCATTTGTGTGATAGGAGTTTTTCAACCAACAGCGCTTTAAAGGCTCATCGGCGAACGCACGATCTATTAAAACCATACGAGTGTTCTATTTGCGGCATGACTTTTTCAACATTAAGTAGCATGAAAAGGCATCATATTACACACACCAACAAACGGCCATACATGTGCCcttattgtaataaaacttttaaatcaaCAGTAAATTGCAGAAAACATATGAAACTACATAAACAAGAAATTGCACAACAGCAACTAGAACTTGAAAAGAAACAACAGTCTTCAAACTCAATTGTGAAGAACATAGAAACGATAACAATCGCAGAacctatttttataaataatcagcAAATACTTCAACCAATTTCTGCCAATGtacagcaaaatttaaatggtcAAATACAAGCAGTAGTTGGTTGTAAAGAAACATCTTTTCTATCGAACTCTCAAGCCTCACAGAATCTTCTAAATACAAATGTAACCACAGTAGAAAATTCTAATATAAATTCGACACAAACATTGCATGCCAGTGAAACAGGTACTATTACCCTAGCTAACTATCCAGGAGACCAAACATTGACACCTGAAAACTTAAGACAACTTGAAGAAACACTGAATCAACAGTTGTTTAATATTGGATTAAATATTACACCTAAcaatacaaataaatcaatcgaAAATAATGTCAATACTTTAGAAAATCGAGAAGCTCCCACATTAAGCATAATTTACGATGAcggaaaaattttagaatcaGCAATGAATACTTCTATTAATGCTGATAATGTTTTTGCTCAACAGtttgataattttgatatCGGCCAAGTATCATTACAGgCTGATGCTCAAATAATGGGGATATCAAATACTAACACAGATTTAACTAACATTTTACAGAATCAATTGTCTCAAACTCAAAATTATACTGTGcaattagttaataataatgtagCCATTGACTCTGTTCTTAATCAGAATCACATAAACAATGAAAACCAAAATAATGAATCTTTAACAGGCtatattaatcaaaatcaaaataataaaaattcagtcaTGAACAATCTTCACTGTCATACATGCAACGTTGGAGAGTTTAATGTAGACAGTTTAAAGGAACACCTTAAAACACATCAAAACAAAGTATATGAATGCACTCAATGCCTTTCTAAATATGCTACAAACGAAGAACTGAGCGAACATGCAAAAGTTCACGAAAATCAAGAaaCTCACAAATGTTATGAATGTCATAAAGAATTTTCGACTACATTGCAATTGCGAGAGCACATAAAGGAACATGTTAAACATGAattaaagcttaaaaatttagGAGTTGATGATATAATTGATTTCGAGTCTGAAAGCAATAAGgaacaagtaaataaaagaattaatatttgtcaATATTGTTCAAAAAGTTTCCGAAAACCTAGTGATCTCATTAGACATGTTAGAACGCACACTGGCGAAAAGCCATACCAGTGTCAGAATTGTGATAAAAGTTTCGCTGTTAAATGCACTTTAGATTCACATCTAAAAGTACACGCAGGTGAAAAAACATACTATTGTAACGTATGCAATACTATGTATGCAACAAGAGGAAGTCTGAAGGTGCATATGAGACTGCATacaggTGATAGGCCATTTACATGTGAAATATGTAATATGACATTCCGTACCTCCGGCCATCGCAAAGTTCACATGATTTCCCATACCCGAGAACCAGGCTCTACCTcacgaaaattgaaaaaaggcaAACCCGAAGGCACAGCACAGCCCAGTGAAAACATTATTCAGATGGTACAAGTACCCAACATTTACGAATGCCAACAGGATACCACTCAAAATCAAAACGTGAATACCATAACGATCAATTCAGTTACGGATCAGGTTACCCTGACATCAGATAATTCCACCTTGAGTGACGGTACTAATCTCCTCGCGTTGAATGAAAACAACCAGCTGGTACAGTTGTTGCTAGCAAATGGCCTCGTCACGATCCAAACGGATGATTCTATGATTTGCACCCAACCGTCAGTAACAGAAAAAGTTTCAGAGAACAGTTTTATAAGCTCACACGAACTGCAGAAAGAAACTAATCAGATAGTATATACCGCAGAATTGTCAAACGTGATACCACCTATAACGAATGCAAGCGACTACCAGTTAAACAACTGCATGGTCCTGCAGATGGGGAATGTTGATTCATTGACAATAAACAATTCTGATGACGTCGATACTTTGAACGAAGCAAAAAGccttaaaaatttaaaacacaaGTGCGATGTATGCGGTAAGGGATTCGCGAAACCGTGCCAGGTCGAGCGACACAAACGCACTCACACGGGCGAGCGACCCTTTCAGTGCGAAATCTGTAGCAAATCCTTCAGCCAAAAGTCGACTCTCCAAATGCACGAAAAGTACCATAAAGGTGATCGACCCCATGCCTGCCCACATTGCGAGCGTTCCTTCACCCAAAGCGGCAATCTTCTCACCCACCTTAGACGCGTTCACAAACTTGACCCGGCTGAGACGAAGCGACTGCCGAAAGAACAACAGTTCGTTTTTTATGATCCAAAACTGCTGCAACAGAACATTGACGAATCACGTAATCTTTGCCTCGATGATATCTCGCTTAGCGAGTTACTTAAGTAA
Protein Sequence
MREFTADCFNFVLLATCSKVFYFALGLSELYYKAQLEAHLKLHNEKCSTDEHRKCKLCRKQFSQPAVYRQHLRDHYKLQTKFTKQTKWGVRHRTTYKCKICMKMFDKPSQLVRHIRVHTGEKPYKCNLCNRAFTQKGSVRIHMWQHNGVRPYSCNLCNATFSQKGNLNSHVERVHKAQEGSTMYRCMQCPCIFKKLGSLNGHMKRVHEGTRSEEMQDREEETLAPVERVNNVGEEESQQVVDDTVSTNEQLPESELASETDKTECATTETPQKFEDGFVVTDNTEKTALVTLLDKTSSNPQGKYIKIKQRFVNNSRFYECNFCVKKFKKPSDLIRHLRIHTQEKPFKCKTCNRSFTLKSTMLTHEKIHKNTKKFSCRLCYASFKFQSELTDHEKFHKEQLKAEANKNQQEVGRTKSCQRKKQCGPEVQNRIPEVVLKEPLVLTEAGDGMLHAQPKYRNDIAHGKGRPHKCYVCPAAFMKLSHLKQHHRKHTGERPYNCHLCDRSFSTNSALKAHRRTHDLLKPYECSICGMTFSTLSSMKRHHITHTNKRPYMCPYCNKTFKSTVNCRKHMKLHKQEIAQQQLELEKKQQSSNSIVKNIETITIAEPIFINNQQILQPISANVQQNLNGQIQAVVGCKETSFLSNSQASQNLLNTNVTTVENSNINSTQTLHASETGTITLANYPGDQTLTPENLRQLEETLNQQLFNIGLNITPNNTNKSIENNVNTLENREAPTLSIIYDDGKILESAMNTSINADNVFAQQFDNFDIGQVSLQADAQIMGISNTNTDLTNILQNQLSQTQNYTVQLVNNNVAIDSVLNQNHINNENQNNESLTGYINQNQNNKNSVMNNLHCHTCNVGEFNVDSLKEHLKTHQNKVYECTQCLSKYATNEELSEHAKVHENQETHKCYECHKEFSTTLQLREHIKEHVKHELKLKNLGVDDIIDFESESNKEQVNKRINICQYCSKSFRKPSDLIRHVRTHTGEKPYQCQNCDKSFAVKCTLDSHLKVHAGEKTYYCNVCNTMYATRGSLKVHMRLHTGDRPFTCEICNMTFRTSGHRKVHMISHTREPGSTSRKLKKGKPEGTAQPSENIIQMVQVPNIYECQQDTTQNQNVNTITINSVTDQVTLTSDNSTLSDGTNLLALNENNQLVQLLLANGLVTIQTDDSMICTQPSVTEKVSENSFISSHELQKETNQIVYTAELSNVIPPITNASDYQLNNCMVLQMGNVDSLTINNSDDVDTLNEAKSLKNLKHKCDVCGKGFAKPCQVERHKRTHTGERPFQCEICSKSFSQKSTLQMHEKYHKGDRPHACPHCERSFTQSGNLLTHLRRVHKLDPAETKRLPKEQQFVFYDPKLLQQNIDESRNLCLDDISLSELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00713814;
90% Identity
iTF_00713814;
80% Identity
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