Basic Information

Insect: Sycophila texana
Gene Symbol: ZNF236
Assembly: GCA_035582955.1
Location: JAWWEN010050251.1:6618-11211[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0016 0.18 13.1 1.6 1 23 2 25 2 25 0.98

2 18 2e-07 2.3e-05 25.4 0.9 1 23 136 158 136 158 0.99

3 18 0.00045 0.052 14.8 3.1 1 23 164 186 164 186 0.98

4 18 0.018 2.1 9.8 1.5 1 23 192 214 192 214 0.96

5 18 0.0082 0.95 10.9 6.6 1 23 286 308 286 308 0.98

6 18 7.1e-08 8.2e-06 26.8 1.4 1 23 314 336 314 336 0.98

7 18 1.9e-05 0.0022 19.2 4.9 1 23 342 364 342 364 0.98

8 18 0.00019 0.022 16.0 5.2 1 23 370 392 370 392 0.98

9 18 0.46 53 5.4 2.5 2 23 672 693 671 693 0.96

10 18 0.093 11 7.5 0.1 1 23 698 720 698 720 0.98

11 18 0.19 22 6.6 4.7 1 23 726 748 726 748 0.97

12 18 4.7e-07 5.4e-05 24.2 1.0 2 23 782 803 782 803 0.97

13 18 0.00013 0.015 16.6 3.2 1 23 809 831 809 831 0.99

14 18 7.4e-05 0.0086 17.3 0.5 1 23 837 859 837 859 0.98

15 18 5.6e-05 0.0065 17.7 2.7 1 23 865 887 865 887 0.98

16 18 3.7e-05 0.0043 18.2 3.1 1 23 1072 1094 1072 1094 0.98

17 18 5.3e-07 6.1e-05 24.0 2.8 1 23 1100 1122 1100 1122 0.98

18 18 6.5e-07 7.5e-05 23.8 2.5 1 23 1128 1151 1128 1151 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0016	0.18	13.1	1.6	1	23	2	25	2	25	0.98
2	18	2e-07	2.3e-05	25.4	0.9	1	23	136	158	136	158	0.99
3	18	0.00045	0.052	14.8	3.1	1	23	164	186	164	186	0.98
4	18	0.018	2.1	9.8	1.5	1	23	192	214	192	214	0.96
5	18	0.0082	0.95	10.9	6.6	1	23	286	308	286	308	0.98
6	18	7.1e-08	8.2e-06	26.8	1.4	1	23	314	336	314	336	0.98
7	18	1.9e-05	0.0022	19.2	4.9	1	23	342	364	342	364	0.98
8	18	0.00019	0.022	16.0	5.2	1	23	370	392	370	392	0.98
9	18	0.46	53	5.4	2.5	2	23	672	693	671	693	0.96
10	18	0.093	11	7.5	0.1	1	23	698	720	698	720	0.98
11	18	0.19	22	6.6	4.7	1	23	726	748	726	748	0.97
12	18	4.7e-07	5.4e-05	24.2	1.0	2	23	782	803	782	803	0.97
13	18	0.00013	0.015	16.6	3.2	1	23	809	831	809	831	0.99
14	18	7.4e-05	0.0086	17.3	0.5	1	23	837	859	837	859	0.98
15	18	5.6e-05	0.0065	17.7	2.7	1	23	865	887	865	887	0.98
16	18	3.7e-05	0.0043	18.2	3.1	1	23	1072	1094	1072	1094	0.98
17	18	5.3e-07	6.1e-05	24.0	2.8	1	23	1100	1122	1100	1122	0.98
18	18	6.5e-07	7.5e-05	23.8	2.5	1	23	1128	1151	1128	1151	0.96

Sequence Information

Coding Sequence: ATGTATCGATGTATGCAATGTCCgtgcatctttaaaaaattgggcAGCTTAAACGGTCATATGAAGCGAGCTCATGGAGGTGTAAGAACGGAAGAAACGTTAGACAGGGATGAAGAGACCGTGGCACCCGACGAGGATGGGGACGGCGACGTAAATGAAGAATCTCAGCAAGTCGTGGATGGCAGCGACCATAGCAACGAACAGTTATCTAAATCCCCGACTGAATCTGAAGCGGATAAAAACGGATGTGTCACTGCAGAAAATCCACAGACATTCGAGGATGGTTTCGTCGTTACTGACAATACGGAGCAGACGGCACTTGTCACACTACTCGATAAAACATCTAGCGATCCTCAGGGaaagtaCATAAAGATAAAACAACGATTTGTAAATAACTCTAGGTTTTACGAATGCAATTCctgtgataaaaaattcaaaaagccTTCCGATCTTATAAGGCACTTGAGAATTCATACGCAAGAAAAGCCATTTAAGTGCAAAACATGTAACCGTTCATTTACTTTGAAATCTACTATGCTGACACACGAGAAGGTTCATAAAAATTCGAAGAAATTTTCCTGTCGCCTGTGTTAtgcttcttttaaatttcaaagcgAACTGGTAGACCATGAAAAaTTTCACAAGGAACAACTGAAACcagatgaaaacaaaaatcagcAAAAAGTTGGTAAAACGAAAAATGGCCATCGGAAAAAACAATTTGGTCCCGAAGTGCAAAATCTGATGCCAGATGTCGTGTTAAAGGAGCCGCTAGTACTCACAGAAGCGGGTGACGGTATGTTGCACGCACAGCCCAAGTACCGGCATGACATCGCCCATGGAAAAGGTAGACCGCATAAATGCTACGTTTGTCCAGCTGCTTTCATGAAGCTCAGTCATCTTAAACAGCATCATCGCAAACATACTGGGGAGCGACCCTTTAGTTGTAATTTATGCGACcgGTCTTTCTCAACCAATAGCGCATTAAAGGCTCACCGACGGAcgcacgattttttaaaaccgcACAAGTGTTCTATTTGCGGCATGACTTTTTCGACATTAAGTAGCATGAAGAGGCATCATATTACTCACACCAACAAACGACCGTACATGTGTCcttattgtaataaaacttttaagtcAACAGTAAATTGTAGAAAACATATGAAGCTCCATAAACAAGAAATCGCACAGCAGCAACTGGAATTCGAAAAGAAACAGCaacaattaacaaattcaACGATGAACAATATAGGCACGATAACAATCTCAGaacctattattattaataatcaacaCATATTGCAACCAATTACTacaaatttacaacaaaattttaatggtcAACTGCATACAATAGTTGGCGACAATGAAACATCTTTTCTGTCAATCCCCCAAACCTCGCAGAATCTTCTAgaaaCAAATGTAAACTCAGTAGAAAATTCTAATGTAAATTCGACACAAACAATGCATGTCAATGAAGCAGGCACTATTACTCTAGCCAACTATGCAGGGGATCAAACATTGACACCTGAAAACTTAAGACAGCTTGAAGAGACACTAAATCAACAGCTATTTAATATTGGATTAAATATTGGACCAAGcaatacaaataaaacaattgaaaataatctcAATCCTTTAGAAAATCGCGAAGCACCTactttaagtataatttacgaagatggaaaaattttggaatCTGCAATCAATACTTCTATTAATGCTGATAGTGTTTTTAATCaacaatttgataattttgatattgGCCAAGTAACATTACAGACTGACGCTCAAATAATGGGGATATCAAATAATACAGCAgatttaactaatattttacagaatCAATTATCTCAGACTCAGCAATACACTGTACAATTAGTTGATAATAATGGAGAAATTGACACTGTTGttaatcaaaatcaaataaacaaagaaagccAGAATCAGGAATCTTTAACAGGCTATGTTAATCAAAATcaaagcaataataatttaatggagGATCTTCATTGTCATACGTGTAATCGCGGAGGCTTTAATATAGACGGTTTAAAGGAACATCTAAAAATGCATCAGAACAAAGTATATGAATGCACTCAATGCATTTCCAAATTTGCTACAAATGAAGAACTCGCTGAGCATGCAAAAGTTCACGAAAATCAAGAgacTCACAAATGTTACGAATGtcataaagaatttttgacAACGTTACAATTGCGAGAGCACATTAAAGAACACGTGAAATACGagttaaaacttaaaaatttaggaGTTGACGACGATGCAATGGATTTTGAGTCTGAAAGTAATAATGAACCAgtacataaaaaagttaatgtttGTCAATATTGTTCAAAAACTTTCCGAAAACCTAGTGATCTCATTAGACACGTTAGAACGCATACCGGCGAAAAACCATACCAGTGTCAgtattgtaataaaagtttcgcTGTTAAGTGTACTTTAGATTCTCATCTAAAAGTACATGCAGGCGAAAAAACATATTATTGCAGTGTATGCAACTCTATGTATGCAACCAGAGGCAGTCTTAAGGTGCATATGAGACTGCATACagGTGACAGACCATTTACATGTTCAATATGTAACATGACATTCCGTACCTCCGGACATCGCAAAGTCCACATGATTTCCCACACCCGAGAACCAGGCTCTACCTCGCGTAAATCGAAAAAAGGCAAGGCCGAAAACACAGAACAGCCTAACGATAACATCGTTCAGATGGTACCCAACGTTTACGAATCTCAACAAGATACCATTCAGAATCAAAATATGAATAGTATAACAATCAATTCAATGTCGGATCAGGTTACTTTGACCACCGACAATTCCACACTGAGCGACTCTAATCTCCTCGCTCTGAATGAAAACAACCAACTGGTACAATTATTACTGGCGAACGGCCTCGTCACGATCCAAACGGATGATTCTACGATTTGTACGCAGACACCGGTAACAGAAAAAGCTCCAGAGAACAATTTTATAGGGCCAGATGAACTGCAGAAGGATATTAATCAAATAGTGTACACCACAGAATTGGCAAACACGATACCACCTACAAATGTCACAAGCAACTACCAGTTGAACAACTGCATGGTTTTACAGATGGGCAATATTGATTCATCGGTAATGGATAATTCCGACGGCCTCATTACTTTGAATGAAGCCAAAAATCTTAAaaatttaaagcACAAGTGCGATGTATGCGGTAAGGCATTCGCGAAGCCGTGCCAGGTAGAGCGGCACAAACGCACGCATACAGGCGAACGTCCCTTCCAGTGCGAGATCTGCAGCAAATCCTTCAGCCAGAAGTCGACCCTACAGATGCACCAAAAGTACCACAAAGGCGATCGACCCCATGCCTGTCCACATTGTGATCGTTCCTTCACCCAAAGCGGTAATCTCCTTACTCACCTTAGACGCGTTCACAAGCTCGATCCGGCTGAGACGAAGCGAGCACCGAAGGAACAGCAGTTCGTTTTTTATGATCCAAAACTGCTGCAACAAAATGTTGATGATGCGCGCAATATCTGCCTTGATGATATCTCATTCATCGAGCTACTTAAGTGA
Protein Sequence: MYRCMQCPCIFKKLGSLNGHMKRAHGGVRTEETLDRDEETVAPDEDGDGDVNEESQQVVDGSDHSNEQLSKSPTESEADKNGCVTAENPQTFEDGFVVTDNTEQTALVTLLDKTSSDPQGKYIKIKQRFVNNSRFYECNSCDKKFKKPSDLIRHLRIHTQEKPFKCKTCNRSFTLKSTMLTHEKVHKNSKKFSCRLCYASFKFQSELVDHEKFHKEQLKPDENKNQQKVGKTKNGHRKKQFGPEVQNLMPDVVLKEPLVLTEAGDGMLHAQPKYRHDIAHGKGRPHKCYVCPAAFMKLSHLKQHHRKHTGERPFSCNLCDRSFSTNSALKAHRRTHDFLKPHKCSICGMTFSTLSSMKRHHITHTNKRPYMCPYCNKTFKSTVNCRKHMKLHKQEIAQQQLEFEKKQQQLTNSTMNNIGTITISEPIIINNQHILQPITTNLQQNFNGQLHTIVGDNETSFLSIPQTSQNLLETNVNSVENSNVNSTQTMHVNEAGTITLANYAGDQTLTPENLRQLEETLNQQLFNIGLNIGPSNTNKTIENNLNPLENREAPTLSIIYEDGKILESAINTSINADSVFNQQFDNFDIGQVTLQTDAQIMGISNNTADLTNILQNQLSQTQQYTVQLVDNNGEIDTVVNQNQINKESQNQESLTGYVNQNQSNNNLMEDLHCHTCNRGGFNIDGLKEHLKMHQNKVYECTQCISKFATNEELAEHAKVHENQETHKCYECHKEFLTTLQLREHIKEHVKYELKLKNLGVDDDAMDFESESNNEPVHKKVNVCQYCSKTFRKPSDLIRHVRTHTGEKPYQCQYCNKSFAVKCTLDSHLKVHAGEKTYYCSVCNSMYATRGSLKVHMRLHTGDRPFTCSICNMTFRTSGHRKVHMISHTREPGSTSRKSKKGKAENTEQPNDNIVQMVPNVYESQQDTIQNQNMNSITINSMSDQVTLTTDNSTLSDSNLLALNENNQLVQLLLANGLVTIQTDDSTICTQTPVTEKAPENNFIGPDELQKDINQIVYTTELANTIPPTNVTSNYQLNNCMVLQMGNIDSSVMDNSDGLITLNEAKNLKNLKHKCDVCGKAFAKPCQVERHKRTHTGERPFQCEICSKSFSQKSTLQMHQKYHKGDRPHACPHCDRSFTQSGNLLTHLRRVHKLDPAETKRAPKEQQFVFYDPKLLQQNVDDARNICLDDISFIELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00713814;
90% Identity: iTF_01380770;
80% Identity: -