Basic Information

Gene Symbol
ZNF236
Assembly
GCA_035586675.1
Location
JAXIUT010000048.1:8033800-8040563[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0025 0.32 12.6 1.3 2 23 54 75 54 75 0.97
2 22 4.4e-06 0.00057 21.2 0.7 1 23 96 118 96 118 0.99
3 22 0.00017 0.021 16.3 0.6 1 20 124 143 124 146 0.96
4 22 1.6e-05 0.002 19.5 0.4 1 23 152 175 152 175 0.96
5 22 0.0022 0.28 12.8 1.8 1 23 184 207 184 207 0.98
6 22 1.9e-06 0.00024 22.4 1.0 1 23 318 340 318 340 0.99
7 22 0.0006 0.077 14.5 3.1 1 23 346 368 346 368 0.98
8 22 0.0081 1 11.0 2.0 1 23 374 396 374 396 0.96
9 22 0.046 5.9 8.6 7.7 1 23 468 490 468 490 0.98
10 22 2.3e-07 2.9e-05 25.3 3.4 1 23 496 518 496 518 0.99
11 22 2.2e-05 0.0028 19.1 3.8 1 23 524 546 524 546 0.97
12 22 0.00035 0.045 15.3 5.4 1 23 552 574 552 574 0.97
13 22 3.3 4.2e+02 2.8 1.1 2 23 855 876 854 876 0.90
14 22 0.013 1.7 10.3 0.2 1 23 881 903 881 903 0.98
15 22 0.0016 0.2 13.2 5.0 1 23 909 931 909 931 0.97
16 22 6.8e-07 8.7e-05 23.8 0.9 3 23 965 985 964 985 0.98
17 22 0.00044 0.057 14.9 5.2 1 23 991 1013 991 1013 0.99
18 22 8.2e-06 0.0011 20.4 0.6 1 23 1019 1041 1019 1041 0.98
19 22 7.2e-05 0.0093 17.4 2.1 1 23 1047 1069 1047 1069 0.98
20 22 9.6e-05 0.012 17.0 3.2 1 23 1252 1274 1252 1274 0.98
21 22 2.7e-06 0.00034 21.9 2.2 1 23 1280 1302 1280 1302 0.98
22 22 2.8e-06 0.00036 21.9 2.4 1 23 1308 1331 1308 1331 0.96

Sequence Information

Coding Sequence
ATGAGGGAGTTCACGACTGAGTGCTTCAACTTCGTCCTGCTGGCCACGTGCTCCAAGGTCTTTTACTTTGCGCTGGGACTCGGCGAGCTGTACTACAAGGCCCAGCTGGAGGCGCACCTGAAACTGCACAACGAAAAATGTTCGACGGACGAGCACCGGAAGTGCAAGCTCTGCCGCAAGCAGTTCTCCCAGCCCGCGGTCTACCGGCAACACTTGCGGGATCATTACAAACTGCAGACGAAGTTCACAAAGCAGACCAAGTGGGGTATCAGGCACAGGACCACCTACAAGTGCAAAATATGCATGAAGATGTTCGACAAACCCAGTCAGCTGGTGCGACATATCAGAGTCCACACCGGTGAAAAACCTTACAAGTGCAATTTGTGCAATCGGGCGTTTACTCAAAAAGGTTCTGTAAGGATCCACATGTGGCAGCATAATGGAGTCAGACCTTATAGTTGCAATCTTTGTAATGCTACCTTTAGTCAAAAAGgaaatttaaattcacatGTAGAGCGGGTGCACAAGGCGCAGGAAGGATCGACAATGTATCGCTGTATGCAATGTCCGtgcatctttaaaaaattaggcAGCTTAAACGGTCATATGAAACGAGTGCATGAAGGTGCCAGAGCTGAGGAAATCACGGATAGAGAAGAAGAATCGGTAGCACCCTTGGAAGAGGCGAACGACGTAGGGGAGGAAGAATCTCAGCAGGTCGTGGGCGACACGGTTCCTACGAATGAGCAGCTGCCGGAATCACAGCTTGAGTCTGAAGCAGACAAAACGGGATGCGCCACTACGGAAACTCCCCAGAAATTTGAGGACGGTTTCGTCGTCACCGACAACACCGAACAGACGGCACTTGTCACGTTACTGGACAAAACATCTAGCGATCCTCAGGGaaggtatataaaaataaagcagcgATATGTAAATAACTCTAGGTTTTATGAATGCAATTTctgtgttaaaaaattcaaaaagccTTCCGATCTTATAAGGCATTTGAGAATTCATACGCAAGAAAAACCATTTAAGTGCAAAACATGTAACCgatcatttactttaaaatcgACTATGTTAACACATGAGAAGATTcacaaaaatacaaagaaatattcCTGTCGTTTGTGTTAtgcttcttttaaatttcaaagcgaACTGACAGATCATGAAAAaTTTCACAAGGAGCAGCTAAAAGCGGAAGCAAACAAAAATCAGCAAAAAGTTGGTAGGACCAAATCGTGTCAGCGTAAAAAACAGTGCGGTCCCGAGGTTCAAAATCGGATACCAGAAGTCGTGTTAAAAGAACCGCTAGTGCTTACAGAAGCAGGCGACGGCATGCTGCATGCTCAGCCTAAGTATCGGAATGACATTGCCCACGGCAAAGGCAGGCCACACAAATGCTACGTCTGCTCAGCAGCTTTTATGAAGCTCAGTCACCTTAAGCAGCATCACCGCAAGCACACGGGGGAACGACCCTACACTTGTCACATGTGCGAACGGAGTTTTTCCACCAACAGCGCATTAAAGGCTCATCGGCGGACGCACGATCTATTAAAACCGCACGAATGTTCTATTTGCGGCATGACTTTTTCAACACTAAGTAGCATGAAAAGGCATCATATTACTCACACCAACAAACGACCGTTCATGTGCCCTTATTgtaacaaaacttttaaatcaaCAGTAAATTGTAGAAAACATATGAAGCTACATAAACAAGAAATTGCACAACAGCAACTGGAACTTGAAAAGAAACATGAACAAACTTCAAACTCAATCGGGAACAACACAGAAACGATAACAATCGCAGagcctattttaattaataatcagcAAATACTTCAACCAATTACTGCAAATCtacagcaaaatttaaatggtcAACTGCAAGCTATAGTTGGTGGTAAAGAAACATCTTTTCTATCGATTCCTCAAGCCTCACAGAATCTTCTAAATACAAATGTAACCACAGTAGAAAATTCTAATATAAATTCGACACAAACATTGCATGCCAGTGAAACAGGTACTATTACCCTAGCTAACTATCCAGGAGATCAAACATTGACACCTGAAAATATAAGACAACTTGAAGAAACACTGAATCatcagttatttaatattggaTTAAATGTTACACCaaacaatacaaataaatcaattgaaaataatatcaatactTTAGAAAATCGAGAAGCACCTACTTTAAGCATAATTTACGATGGcggaaaaattttagaatcaGCAATGAATACTTCTATTACTGCTGATAATGTTTTTGCTCAACAGtttgataattttgatatcaGCCAAGTAACATTAGAGGCCGACTCTCAAATAATGGGAATATCAAATACTAATACCGATTTAACTAACATTTTGCAGAATCAATTATCCCAAACTCAAGGCTATACTGTGCAATTAGTTGATAACAATATAGCAATTGACTCTGTTCTTAATCAGAATCgtataaacaatgaaaaccAAAATAATGAATCTTTAACAGGCtatattaatcaaaatcaaaatgataaaaattcagTCATGAAAAATCTTCGCTGTCATACATGCAACCTTGGAGAGTTTACCGTAGACAGTCTAAAAGAACACCTTAAAATACACCAAAACAAAGTATATGAATGCACTCAATGCCTTTCTAAATTTGCTACAAATGAAGAACTTAGCGAGCATGCAAAAGTTCACGAAAATCAAGAaACTCACAAATGTTATGAAtgtcataaagaattttcgacTACATTGCAATTGCGAGAGCACATAAAAGAACATGTTAAACATGAgttgaaacttaaaaatttaggaGTTGACgatataattgattttgagTCTGAAAGCAATAAGGAAccagtaaataaaagaattaatatttgtcaATATTGTTCAAAAAGTTTCCGAAAACCTAGTGATCTCATTAGACACGTTAGAACTCACACCGGCGAAAAGCCATACCAGTGTCAGTATTGTGATAAATGTTTCGCTGTTAAATGTACTTTAGATTCTCATCTAAAAGTACATGCAGGCGAAAAAACATACTATTGTAACGTATGCAATACCATGTATGCAACCAGAGGAAGTCTGAAGGTGCATATGAGACTGCAtacaggtGATAGGCCATTTTCATGTGAAATATGTAACATGACATTCCGTACTTCCGGCCATCGCAAAGTCCACATGATTTCCCATACCCGAGAACCAGGCTCTACCTcgcgaaaatcaaaaaaaggcAAGACCGAAGGCACAGAACAGCCTAGTGAAACATCAATTCAGATGGTGCAAGTACCCAATATTTACGAATCTCTACAGAATACCACTCAGAATCAAAATGTGAATACCATAACGATCAATTCAGTAACAGATCAGGTTACCCTGACTGATAATTCCACCTTGAGTGACGGTACTAATCTCCTCGCGTTGAATGAAAACAACCAGCTGGTACAGTTATTGCTAGCAAATGGCCTCGTCACGATTCAAACAGATGATTCTATGATTTGCACCCAGTCGCTGGTTCCAGAGAACAATTTTATAAGCTCACACGAACTACAGAAAGAAACTAATCAGATAGTATACACCgcagaattttcaaatacgATACCTCCTATAACGAATGCGAATGACTACCAGTTAAACAACTGCATGGTCCTACAGATGGGGAATGTTGATTCATCGACAATGAGTAATTCGGATGATGTCGATACTTTGAACGAAGCAAAATAccttaaaaatttaaaacacaaGTGCGATGTATGCGGTAAGGGATTCGCGAAACCGTGCCAGGTAGAGCGACACAAACGCACCCATACAGGCGAGCGACCCTTCCAGTGCGAAATCTGCAGCAAATCCTTCAGCCAGAAGTCGACTCTTCAGATGCACGAAAAGTACCATAAAGGTGATCGACCCCATGCCTGCCCACATTGCGAGCGGTCCTTCACCCAAAGCGGCAATCTCCTCACCCACCTTAGACGCGTTCACAAACTTGACCCGGCTGAAACGAAGCGACTGCCGAAAGAGCAGCAGTTCGTTTCTTATGATCCGAAACTGCTGCAACAGAACGTTGACGAATCTCGTAATCTCTGCCTCGATGATATCTCGCTTAGCGAGTTACTTAAGTAA
Protein Sequence
MREFTTECFNFVLLATCSKVFYFALGLGELYYKAQLEAHLKLHNEKCSTDEHRKCKLCRKQFSQPAVYRQHLRDHYKLQTKFTKQTKWGIRHRTTYKCKICMKMFDKPSQLVRHIRVHTGEKPYKCNLCNRAFTQKGSVRIHMWQHNGVRPYSCNLCNATFSQKGNLNSHVERVHKAQEGSTMYRCMQCPCIFKKLGSLNGHMKRVHEGARAEEITDREEESVAPLEEANDVGEEESQQVVGDTVPTNEQLPESQLESEADKTGCATTETPQKFEDGFVVTDNTEQTALVTLLDKTSSDPQGRYIKIKQRYVNNSRFYECNFCVKKFKKPSDLIRHLRIHTQEKPFKCKTCNRSFTLKSTMLTHEKIHKNTKKYSCRLCYASFKFQSELTDHEKFHKEQLKAEANKNQQKVGRTKSCQRKKQCGPEVQNRIPEVVLKEPLVLTEAGDGMLHAQPKYRNDIAHGKGRPHKCYVCSAAFMKLSHLKQHHRKHTGERPYTCHMCERSFSTNSALKAHRRTHDLLKPHECSICGMTFSTLSSMKRHHITHTNKRPFMCPYCNKTFKSTVNCRKHMKLHKQEIAQQQLELEKKHEQTSNSIGNNTETITIAEPILINNQQILQPITANLQQNLNGQLQAIVGGKETSFLSIPQASQNLLNTNVTTVENSNINSTQTLHASETGTITLANYPGDQTLTPENIRQLEETLNHQLFNIGLNVTPNNTNKSIENNINTLENREAPTLSIIYDGGKILESAMNTSITADNVFAQQFDNFDISQVTLEADSQIMGISNTNTDLTNILQNQLSQTQGYTVQLVDNNIAIDSVLNQNRINNENQNNESLTGYINQNQNDKNSVMKNLRCHTCNLGEFTVDSLKEHLKIHQNKVYECTQCLSKFATNEELSEHAKVHENQETHKCYECHKEFSTTLQLREHIKEHVKHELKLKNLGVDDIIDFESESNKEPVNKRINICQYCSKSFRKPSDLIRHVRTHTGEKPYQCQYCDKCFAVKCTLDSHLKVHAGEKTYYCNVCNTMYATRGSLKVHMRLHTGDRPFSCEICNMTFRTSGHRKVHMISHTREPGSTSRKSKKGKTEGTEQPSETSIQMVQVPNIYESLQNTTQNQNVNTITINSVTDQVTLTDNSTLSDGTNLLALNENNQLVQLLLANGLVTIQTDDSMICTQSLVPENNFISSHELQKETNQIVYTAEFSNTIPPITNANDYQLNNCMVLQMGNVDSSTMSNSDDVDTLNEAKYLKNLKHKCDVCGKGFAKPCQVERHKRTHTGERPFQCEICSKSFSQKSTLQMHEKYHKGDRPHACPHCERSFTQSGNLLTHLRRVHKLDPAETKRLPKEQQFVSYDPKLLQQNVDESRNLCLDDISLSELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00713814;
90% Identity
-
80% Identity
-