Esim022086.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_905147225.1
- Location
- LR990116.1:19245956-19268203[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.32 1.1e+04 -3.7 0.2 185 186 73 74 36 100 0.47 2 3 1.6e-78 5.7e-74 250.1 24.0 1 262 124 385 124 408 0.92 3 3 1 3.5e+04 -5.4 16.2 1 49 411 458 411 481 0.74
Sequence Information
- Coding Sequence
- ATGGGGCATAGATCCAAAGTGGCCACACCTCACAGCAGTGACGATGAGAGCGGGGACGCTTTTACAGATGGTGATTTCGGAGACTCCGATGAAGAAACCCTAATTATTGAAAGGGATGATGATATAGTAACGTCTCAAATTCCTGTTAACGAAGCTAAAAACGAGGACTTACAGAAAATGAACGCGGTAACCAATGGTCATTCTGTCGATGTGGAAGAGGAAGCTAAGGTTAACGGTTCCATGATCAGTCAGAATGGGAATAGTTCTAGTGACGAGAATCAAAGTTTAGTGCAATCAGAATTTCGTAGAGACTCTCACGGCGACCAAAATCCTTCGATAGTCGGTATTCTTGGAGGTCAACAAAaccatGCGGAACAGCGGCTGGCCGCTCGTCGCGCGGCGCGCGCAGAGGCACGCGAGATACGTATGAGAGAATTGGAGAGACAGCAGCGTGAACAGGAGGACCATGCTGATAAGGCGTACGATATGTATGCGGAGACTGTGGGTAGGCGTGACCGCACGAGACTGGCAGCGCTCAGCCCCGCCAGCTCCGTGCACTCGCCGCGGCGGAGTTCTGAGGACTCCGTAGAGGATGTGTTCAGTGTCAAAGATCTTAGGCACGAATTGAAAGAAGTCGAGGAGAAATTTCGAAAGGCTATGATACTAAACGCCCAGTTGGACAACGACAAGGCTGCCCTGGGCTATCAACTGGAACTGCTCAAAGATAGGATAGAGGAACTGCACGAGGAATATGCACAGTTACAGCGGGAGCACAAGGAAAAGTGTTCTTCACTGGAGCGGTTAAGGCGCGAACACGAGGTGCTGCAGCGCGAGCTGGAAGCGGCACGGGACGCGGTGCGGGCGCGGGACGCGGCCGCCGACGCCGCGGGGTACGCCTTCGTGGAGGCCGCCTCGCTGGACGGGGGCGCGGGGGCCGCGGGCGCGGGGCCCGCCGTGGGCAGCGTGCCGCCGCTCGCGCTCGTCTCGCACCGCGCGCAGCAGATGCTCAACGACGCCGGGGAGGGCACACTAGACGTCCGATTGCAGAATCTTTTGAGTTCGAAACAGTCGCTCGAGTCGGAGGTGAGGAAGCTAAAGTTACAGCTGAACGAGGAGCGAGCGGCGCGGCAGAACGGCGCCGCCCACCACCACGAGCTGGAGTACGAGAGCGAGCTGGAGGCGGCGCGGCGCGGCGCCGTGGAGGCCAAGGCGCGGTGCGCGCGCGCCGAGGCCGAGGCTGCGCTCTGCGCGGCCGCCACGGCGCGGCTCGAGGCGCAGCTCGCCCGGCTGCGGGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGGGAGGCAAGAGAAGCGTTGAACCGAGTTGAAGAATTGGAAACTGAGAACAGCCATTTAACGAAACGACTCGACAAACTGAAGAACGCAAAGTCGGCATTATTGAAGGATCTGTGA
- Protein Sequence
- MGHRSKVATPHSSDDESGDAFTDGDFGDSDEETLIIERDDDIVTSQIPVNEAKNEDLQKMNAVTNGHSVDVEEEAKVNGSMISQNGNSSSDENQSLVQSEFRRDSHGDQNPSIVGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRDRTRLAALSPASSVHSPRRSSEDSVEDVFSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSLERLRREHEVLQRELEAARDAVRARDAAADAAGYAFVEAASLDGGAGAAGAGPAVGSVPPLALVSHRAQQMLNDAGEGTLDVRLQNLLSSKQSLESEVRKLKLQLNEERAARQNGAAHHHELEYESELEAARRGAVEAKARCARAEAEAALCAAATARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00931427; iTF_00932571;
- 90% Identity
- -
- 80% Identity
- -