Esim008595.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990107.1:21117822-21118265[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-10 6.1e-08 33.2 0.0 3 36 13 46 11 51 0.93 2 2 9.3 4e+03 -1.5 0.0 2 10 85 93 84 97 0.81
Sequence Information
- Coding Sequence
- ATGGAGCCACAAAAGCGGCGAAAAGTGTACAGTAAAACACAACTAGCCGAAGCAATCAAAGCAATTAATGACGGAACAAGTGTATATGAGGCATCAAAAAGGTTTAATATTCCTAAAACTACATTACGAGACAAACGGGACGAGAAATATAAGAATGAAATTTGCGGAGTTCAGCCGGTTCTAAATTTAAGTGAAGAAAAACAGATTGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGTCCAAAACTTAAATCGTCCAAAACCTTTTAAAAATGGTATGCCTGGCAGATATTGgtttgagaattttataaatagacatcCAACAGTATCTAAACGCGTTGCACAAAATCTTCCTTCAAGCCGAAATCAAGTCACAGAAGCAGCTATACGTGCATAG
- Protein Sequence
- MEPQKRRKVYSKTQLAEAIKAINDGTSVYEASKRFNIPKTTLRDKRDEKYKNEICGVQPVLNLSEEKQIVDWIHYLGKMGFPVTKEQLLEAVAKLVQNLNRPKPFKNGMPGRYWFENFINRHPTVSKRVAQNLPSSRNQVTEAAIRA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029156; iTF_01029153; iTF_00358473; iTF_00758078;
- 90% Identity
- iTF_01029156;
- 80% Identity
- -