Esim025692.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990119.1:16338744-16340665[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-11 7.4e-09 36.1 0.1 4 41 18 55 16 57 0.95
Sequence Information
- Coding Sequence
- ATGCCAAATACATACAAACGGAAGACGCAGCAACAGACATGGGACTTGGCAGCAATGGAAAAAGCTATAAGAGCTGTAAGAAACGAAATAATGGGCTACCTCAAGGCTAGCAAAGTATTCGAAGTTCCTCGATCGACGCTCAAAAGACGTATAAAAGGAATAAATAAAGAAGccgttgaaaataaaaaactattggggTCTTGCCGTCCAACTTTTAGTCCGGAGCAAGAACAAGAATTGGTGCATCACATTTTAGACATGGAAAAGCGATTTTATGGATTAACTTTACAAGATGTACGGAGACTGGCTTATCAGTTAGCTGAACGCAATAATATAGAACACAAGTTTAATAAAGAAACTGAAATGGCTGGCAAAGCATGGATTTCTGCTTTTAGAAAACGTCATCCGGAACTGACACTAAGAAGCCCTGAGCAACCTTACTTGCTCGAGCACAGGGCTTTAATAAAGTCTAAAACAAGCTACCCACCTCATCGTATTTTCAATGTTGATGAGACTGGCTTTACGACAGTGCAGAGTAAGAGCTCTAAAATATTGGCGCAAAAGGGCAAGAAGCAGGTTGGCGCTATCACCTCAGCAGAGCGAGGTATATTAAGCACTGTTGTAATTTGTATGGCAGCTGGTGGAAACTGCATTCctccatttattatttttccccGGAAAAGAATGAAGGTGGAACTTCAAGCACCACCGGGTACAGGGTTTGCTTGTCATTCATCAGGGTGGATGCAGTTggacatttttacagaatggTTTAAACATTTCCTCAAATTCGCCAAGCCAAGTGAAGATGATCCAGCTCTCCTGATTCTTGATGGACATAATACGCACACCAAAAATTTGGATTGTATTGACTTTGCAAGAAAAAATCACACCACTGTCTTGTGTTTGCCACCACACTGCAGTCACAGGCTTCAACCACTAGATGTGTCTTTCATGGGGCCTGTAAACAAATACTACATCCGAGCAGTTGAGAAGTATTTTCGCAATAACCCAGGGAGAGCAATAACTGTCTTCCAATTTAGCAAACTCTTTGATGTGAGGCACTCTTACAGTGAGACAGCCCAACAGTCTATTGCAATCAGTGGTTTTCGTAAATGTGGAATGGAGCCAATGGATCGCCACGTCTTTAAAGATCATGACTTTTTGGCTGCAGACACAACAGATGTGGCTCTTTCTGAACCGGAAATACAACAGAATGAAGCCAACAAAGAAAATGAGATACCGGATAGACGAGCGAACATAACAGATGCGGTTCTTGCTGAAACGGTAAGACAACAAAATGATCCCAGCAGCGAGGATGAGACACTTGATAGAGGAGAGTCTCCATCAATTCTACAGGATACCCAAGAGGAAACACTAGCAATGACACCACCAATGTTAGATACGAAAGCAAGCACGTTAATGTCGCCATTATTAGATTGGCAACTTGGTACATTAACCTCGTCAATGTTAGCTCCACAACCAAGCACTATCACGTCACCAATATTAGAACCACAACCAAGCACTTCTTTCGCAATAACGCCTAAAGACTTGTTTCCGATTCCTAAAGCAttacctaaaacaaaaaaaattaacagaaaGAGGGGTCGCACAGTGATCTTAACTAGCAGTCCATATAAAAATGAGTTAGAAGAAGAGAAAACACAACAGAAAGCACCAAAAAGAGTTTCTAAACTTGCTattgtttcaaaaaaaaatgctaagaAACCTAAGATGAACAAATGCGTCCAAATTGATGGCGATGATGAGGATGACGACCCTGAATGTTTTTACTGCGGCGAAACTTGGTCCAAGTCAAAACATGATGATGGCTGGATACAGTGCTCTGTCTGCAAAAGGTGGGCCCATGAAGCATGCTAG
- Protein Sequence
- MPNTYKRKTQQQTWDLAAMEKAIRAVRNEIMGYLKASKVFEVPRSTLKRRIKGINKEAVENKKLLGSCRPTFSPEQEQELVHHILDMEKRFYGLTLQDVRRLAYQLAERNNIEHKFNKETEMAGKAWISAFRKRHPELTLRSPEQPYLLEHRALIKSKTSYPPHRIFNVDETGFTTVQSKSSKILAQKGKKQVGAITSAERGILSTVVICMAAGGNCIPPFIIFPRKRMKVELQAPPGTGFACHSSGWMQLDIFTEWFKHFLKFAKPSEDDPALLILDGHNTHTKNLDCIDFARKNHTTVLCLPPHCSHRLQPLDVSFMGPVNKYYIRAVEKYFRNNPGRAITVFQFSKLFDVRHSYSETAQQSIAISGFRKCGMEPMDRHVFKDHDFLAADTTDVALSEPEIQQNEANKENEIPDRRANITDAVLAETVRQQNDPSSEDETLDRGESPSILQDTQEETLAMTPPMLDTKASTLMSPLLDWQLGTLTSSMLAPQPSTITSPILEPQPSTSFAITPKDLFPIPKALPKTKKINRKRGRTVILTSSPYKNELEEEKTQQKAPKRVSKLAIVSKKNAKKPKMNKCVQIDGDDEDDDPECFYCGETWSKSKHDDGWIQCSVCKRWAHEAC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00709123; iTF_00709124; iTF_00709125; iTF_00709126; iTF_00709127; iTF_00709128; iTF_00709129; iTF_00634259; iTF_01029158; iTF_00122284; iTF_00745551; iTF_01440914; iTF_01029144; iTF_00926524; iTF_00926525; iTF_00926526; iTF_00926527; iTF_00771805;
- 90% Identity
- -
- 80% Identity
- -