Ecre020736.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- -
- Assembly
- GCA_963693475.1
- Location
- OY856349.1:21411512-21413491[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-13 2e-10 41.7 0.0 3 41 17 55 15 57 0.94
Sequence Information
- Coding Sequence
- ATGCCAAGTACATACAAACGGAAGACGCAGCAACAGACATGGGACTCGGAATCAATGGAAAAAGCTATAAGAGCTGTAAGAAACGAAGAAATGGGCTACCTCAAGGCTAGCAAAGAATTCGAAGTTCCTCGATCGACGCTCAAAAGACGTGTAAAAGGAATAAATAAAGAAgctgttgaaaataaaaaactattggGGTCTTGCCGTCCAACTTTTAGTCCGGAGCAAGAACAAGAATTGGTGCATCACATTTTAGAAATGGAAAAGCGATTTTACGGATTAACTTTACAAGATGTACGGAGACTGGCTTATCAGTTGGCTGAACGCAATAATATAGAACACAAGTTTAATAAAGAAACTGAAATGGCTGGAAAAGCATGGACTTCTGCTTTTAGAAAACGTCATCCGGAACTGGCACTAAGAAGCCCTGAAGCAACCTCACTTGCTCGAGCACAGGGCTTTAATAAAGTAAGTGTCACAAAATTTTTTGACCTTCTAGAAGAGGTTAGGTCTAAAACAAGCTACCCACCTCATCGTATTTTCAATGTTGATGAGACTGGCTTTACGACAGTGCAGAGTAAGAGCTCTAAAATATTGGCGCAAAAAGGAAAGAAGCAGGTTGGCGCCATCACCTCAGCAGAGCGAGGTACATTAAGCACTGTTGTGATTTGTATGGCAGCTGGTGGAAACTACATTCCcccttttattatttttccccGGAAAAGAATGAAGGTGGAACTTCAAGATGGGGCACCACCAGGTACAGGATTTGCTTGTCATTCATCAGGGTGGATGCAGTTGGATATTTTTACAGAATGGTTTAAACATTTCCTCAAATTCGCCAAGCCAACTGAAGATGATCCAGCTCTCCTGATTCTAGATGGACATAATACCCACACCAAAAATTTGGATTTTATTGACTTGGCAAGAAAAAATCACACCACTGTCTTGTGTTTGCCGCCACACTGCAGTCACAGGCTTCAGCCACTAGATGTGTCTTTCATGGGGCCTGTGAACAAATACTACATCCGCGCAGTTGAGAAGTATCTTCGCAATAACCCAGGAAGAGCAATAACTGTCTTCCAATTCAGCAAACTTTTTGGCGTAGCTTACAGTGAGGCAGCCCAACAGTCCATTGCAGTCAATGGTTTTCGTAAATGTGGAATAGAGCCAATAGATCGCCACGTCTTTAAAGATCATGACTTTTTGGCTGCAGACACAACAGATGTGGTTCTTGCTGAACCGGAAACACAACAGAATGAGGTCAACAAAGAAAATGAGACACCTGATAGACGAGCAGACACAACAGATGTGGTTCTAGCTGAAACGGAAACACAACAGAATGATGCCAGCAATGAGGATGAGACACTTGATAGAGGAGGGTCTTCAATTCTACAGGATACCACCCAAGAGGAAACACTAGCAATGACACCACCAATGTTAGATATGCAAGCAAGCACGTTAATATCGCCATTATTAGATTGGCAACCGGGCACATTAACCTCGCCAATGTTAGCTCCTCAACCAATTACATTCACGTCACCAATATTAGATCCACAACCAAGCACATCTTTCGCAGTAACGCCTAAAGACTTGTTTCCGATTCCCAAAGCACTGCATagaacaaaaaaagttaacagaAAGAGAGGTCGTACAGCAATCTTAACTAGCAGTCCGTATAAAAAAGAGTTAGAAGAAGAAAAAACACAACAGAAACAAAAGAACGCGCCAAAAAGAGTTTCTAAACTTGGTATTGCTTCAAAAAAAAGTTCTAAGAAACCAAAAATTAAGAAATGTGCCCAaactgatgacgatgatgaggATGACGACCCTGAATGTTTTTACTGCGGTGAAATTTGGTCTAAGTCAAAACATGACGATGGGTGGATACGGTGTTCTGTCTGTAAAAGGTGGGCTCATGAAGCATGCTCGGGCTGTGATGATTTAGACAACGACTTTCTATGTGAATTTTGTTcctaa
- Protein Sequence
- MPSTYKRKTQQQTWDSESMEKAIRAVRNEEMGYLKASKEFEVPRSTLKRRVKGINKEAVENKKLLGSCRPTFSPEQEQELVHHILEMEKRFYGLTLQDVRRLAYQLAERNNIEHKFNKETEMAGKAWTSAFRKRHPELALRSPEATSLARAQGFNKVSVTKFFDLLEEVRSKTSYPPHRIFNVDETGFTTVQSKSSKILAQKGKKQVGAITSAERGTLSTVVICMAAGGNYIPPFIIFPRKRMKVELQDGAPPGTGFACHSSGWMQLDIFTEWFKHFLKFAKPTEDDPALLILDGHNTHTKNLDFIDLARKNHTTVLCLPPHCSHRLQPLDVSFMGPVNKYYIRAVEKYLRNNPGRAITVFQFSKLFGVAYSEAAQQSIAVNGFRKCGIEPIDRHVFKDHDFLAADTTDVVLAEPETQQNEVNKENETPDRRADTTDVVLAETETQQNDASNEDETLDRGGSSILQDTTQEETLAMTPPMLDMQASTLISPLLDWQPGTLTSPMLAPQPITFTSPILDPQPSTSFAVTPKDLFPIPKALHRTKKVNRKRGRTAILTSSPYKKELEEEKTQQKQKNAPKRVSKLGIASKKSSKKPKIKKCAQTDDDDEDDDPECFYCGEIWSKSKHDDGWIRCSVCKRWAHEACSGCDDLDNDFLCEFCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00709130;
- 90% Identity
- iTF_00926524;
- 80% Identity
- -