Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000060.1:148973-159513[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.1 6e+02 1.9 0.1 3 23 110 130 108 130 0.94

2 20 0.01 0.75 11.0 1.1 2 22 134 154 133 156 0.88

3 20 0.12 8.8 7.7 1.7 3 23 407 428 405 428 0.94

4 20 0.62 47 5.4 0.0 1 19 436 454 436 456 0.95

5 20 0.04 3 9.1 0.6 2 23 467 488 466 488 0.94

6 20 5.7 4.3e+02 2.4 0.4 1 23 504 527 504 527 0.81

7 20 0.032 2.4 9.5 0.7 1 23 536 559 536 559 0.97

8 20 2 1.5e+02 3.8 1.3 2 23 577 599 576 599 0.90

9 20 3.8 2.8e+02 2.9 4.4 5 23 611 631 606 631 0.84

10 20 0.011 0.83 10.9 2.3 1 23 640 663 640 663 0.91

11 20 0.017 1.2 10.4 0.7 1 21 669 689 669 692 0.77

12 20 8.7e-05 0.0065 17.5 3.1 1 23 727 749 727 749 0.98

13 20 0.0007 0.053 14.7 0.9 1 23 756 778 756 778 0.98

14 20 4.3e-05 0.0032 18.5 1.4 1 23 783 805 783 805 0.96

15 20 0.0033 0.25 12.6 1.8 1 23 811 833 811 833 0.97

16 20 1.7e-06 0.00013 22.9 1.5 1 23 839 861 839 861 0.98

17 20 7.1e-05 0.0053 17.8 2.3 2 23 868 891 868 891 0.96

18 20 0.00048 0.036 15.2 0.7 2 23 901 923 900 923 0.96

19 20 0.0024 0.18 13.0 0.2 1 23 928 950 928 950 0.98

20 20 0.00042 0.032 15.4 3.8 1 23 956 979 956 979 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.1	6e+02	1.9	0.1	3	23	110	130	108	130	0.94
2	20	0.01	0.75	11.0	1.1	2	22	134	154	133	156	0.88
3	20	0.12	8.8	7.7	1.7	3	23	407	428	405	428	0.94
4	20	0.62	47	5.4	0.0	1	19	436	454	436	456	0.95
5	20	0.04	3	9.1	0.6	2	23	467	488	466	488	0.94
6	20	5.7	4.3e+02	2.4	0.4	1	23	504	527	504	527	0.81
7	20	0.032	2.4	9.5	0.7	1	23	536	559	536	559	0.97
8	20	2	1.5e+02	3.8	1.3	2	23	577	599	576	599	0.90
9	20	3.8	2.8e+02	2.9	4.4	5	23	611	631	606	631	0.84
10	20	0.011	0.83	10.9	2.3	1	23	640	663	640	663	0.91
11	20	0.017	1.2	10.4	0.7	1	21	669	689	669	692	0.77
12	20	8.7e-05	0.0065	17.5	3.1	1	23	727	749	727	749	0.98
13	20	0.0007	0.053	14.7	0.9	1	23	756	778	756	778	0.98
14	20	4.3e-05	0.0032	18.5	1.4	1	23	783	805	783	805	0.96
15	20	0.0033	0.25	12.6	1.8	1	23	811	833	811	833	0.97
16	20	1.7e-06	0.00013	22.9	1.5	1	23	839	861	839	861	0.98
17	20	7.1e-05	0.0053	17.8	2.3	2	23	868	891	868	891	0.96
18	20	0.00048	0.036	15.2	0.7	2	23	901	923	900	923	0.96
19	20	0.0024	0.18	13.0	0.2	1	23	928	950	928	950	0.98
20	20	0.00042	0.032	15.4	3.8	1	23	956	979	956	979	0.98

Sequence Information

Coding Sequence: ATGTCTTCCGACGACTCAGACGACGAGCCTTTAGCAGTTCTAGCTTCGAAGAAGAAAACTGACTATGAAGTTGAAATATTTCCTGTTGTTGAGAATAAGAACCGAAAGAAGAAAACTTTCTCAGCCAAAAAGCCCTGCGATGTGTCCATAGAACTTCAACCAAAGGAAGAGTATGTGCCTGTAACTATTGAGAGACCAGCTGATGTTTGGCTGTACCTTAAAGACCTGAATCCGAATGGGCCATACAGCTGCTTACTATGCTCTGAATGGTTCCTACACAAGACTAAAATAGTCATTCACTATGTTGTTAATCATAAAAAGGACTTTTGTGGTATTTGCAGATATTTTGTACCTGATAGAATATCCTGGCTCTCCCATTTGAACTTTCATAATCCTTGGCACTGTTCTCAATGTCCCGAGACCTTTACTACAGAAGCTCTTCTTCGAGAACACTTCAGCTTTCAGCACAACCTGGTTCACTGCAGGCTCTGCTACACTCGCCTTATTGATGGAGAGGAGTACCAAACACATCTCTTCCAAAAGCACAGTGTTACCAAGATTTCTGTGATAAATGAGGAAAGCTTCTGGGAGATTGACCAAGAAAACCAAAAGTACCATTGCATTCTCTGCACCAAAACCAGCAATGACATACAGACATACTCAAATCATTACATGGCATACCATCACATGACATTGAAGTGTCTTGCCCCTCTGATATCTGGAAAAAACTGGAACTTTCCTGTTCATGGTGCTGAAATAACAGTAGACTTTATTCACCGACAGCTCAAACCATTTGAAAAGTTTGGTTATCTAAATCTGGACACAAAACCATTTAGTCTCATGGAGAATAAAGGAATTGAAGAACAATCAAAGCCCTTCCAGCTTGTGTCTGATATGTTAAAAGAAGAATATTCGAGTGAACCTGATGAAATAGCTGGTAACATTGAAAGTGATGAGCTAGCGATTGGTGATGCTGAAAGAAACAACTACCAAGAGCTGGAATCCAAGATAAACACTATGGATGATCTTGTGCTGGAAGAAATTACAAAATTGTACAAAGGAGAAGAGGATTTTGACTGCACTCAAGTAGAACTAATCATGCTACAAAAATGTTACTTTGATTATGTAAATGACACtctaaataaaatcaacttaAACATCATGCCCCAGGTTTCTACGATAATCTACAAACCAACTGATCATATAGTCACAATATTCTGTGACCTATGCAAAACACAATTCAAAAAGGTCAACACCTTTACTCAGCATATGGTCAAAATGCATGGATTGAAAATCATCCCTACGTTTTCATGCAGAGTGTGTGCAGTGACTTTTGAGACATACCCTGAGCTTGAGCAGCATGAGATTGAAGAGTTGGGAGATTTTGATGATCTATGGATCTGTCAGTTTTGTGAGAAAGAATTTGACAACCGGGAGCAGACCAGACAGCATCTGACGGAGCATTGGGATGCGCTAGAGTATGATAACTGCTTCAGTCCGCATTTGGGGTTCAAGTGTAGGTACTGCCCGACTTTATTCTGGAATGAGACAGATCGAGAGATTCATCAAGTGAGGGTACATTCACAAAAGCATGCACAGGATTATTACAAATGCGAGGGGTGTGATGAGCTGCTCAGTGATAAGgtctgGTACATCCATCACTACCTAAGCAAGCACACGCCGGTAGAAAACCCAGACAGCATCCTTCATATATCCACCTTCCTCCTGAAATGCTGCATCTGCTCCGTAGTCTTCCAGAATGTGGATGATATCAGGAACCATTTCAATGATAAGCACCCTGATGAGAGAAAGGTGTTCTGTTCTTTGGATACTTGTCAGTACAAGCCTTTTAGTCACAAGAAGTCTTTTCAATTGCATTTGAAGTCATGCCACAGTACGAAGAAGCGTCCAGAAGAATTCTCGTGTCAGTACTGCGGCAAGGAGTTCAACAACCCCCGGTCGTGCGCTTCGCACACGCAGCAGGCGCATGGTGGCGCGGGACGGTTCAACTGTACTTACTGCGGCAAGGAGTTCAACAACTCCCGGTTGAGCGATGCGCACACGCAGCAGGCGCACGGCGGCGCGGGACGGTTCAACTTTACTGTCTGTGAGGAGCCGCTCATGACTGCAGATGAACGAAAGATTCATTACCTTCTCATGCACCCGGGTCGCCATCCATTCCAATGCCGCGACTGCGATAAATCATTCCAGTACAAATCTTCTCTCTACCTCCATCGGAAAGAACACGCGCCAGACAAACCTGACTACACGTGTAGCTACTGCGGGAAGATATTCTTGAAACGAGACTCCTTCCGGGAACACGTGATGATACACGAGGGTCCGAAACACGCCTGTTCATACTGCCCCATGGTCTTCGTACAGCGGTCCAACATGTTACGGCATGAACGGAGGCATACGGGAGAACGGCCATACGCCTGTCAGTTCTGCCCTAAGACGTTCTCTGATAAGGGGGCTTGCTCGTCACATGCAAGGACCCATCAAAAACTGCCGGCTTTCCCTTGCATGTATTGCGGACAAACCTTCGCTCAAAAGTCGAAGCTTACTTACCATATTAGAAAACATACTGGAGAAAATCTAGAAACGTGTCCCCATATTAACTGCGGGAAGATCTTTACCAGCCCGTGCTCACTGCGGGAACACATGAAGATACACCAGAAGAAGCAGGTCTTGGACCCGGTCAAATGTCCGCTTTGTTCGAAATCCTTCCAAGACGAGAAGTACATGATGCGTCACCTTCGAGGCACTCACACGAACACAATGTATCCCTGTCCACTGTGCAAGAAGAAACTGCACAGCCCGGCGGGACTACGAGACCACGTGATCACGCACAGCGGCAGCAAGGCTTATAAGTGCAAGCAATGCTCAAAATCCTACAACGTTAAGCGCACAATGATAAGGCACCTCCGACGTCGCCACAGTCTGAAAGCCGCCGAAACCACCCTATCTGAATTCTACACCAAACTGGACCCTAGAAACTGCAGATTAGACCTAGATGAAACAACAATGACCAGCATATTCGGACCTCCTAAAAATATTATCGATGCTGTCAACTTTACAAAGTTAAACAAGCTTAAGCTTAGATTAAGTAAAGATTATTCTAGAGAAGATAGTACCAGTGAATCGGAAATACCGCCAATAGAATCAGTTCAAGTGAAGATTGAATGCGAAGACGTAGATGAACCTGAGAGTGAGTTGCAGCCGACTGATTTTGTCAGTGTGAAGATTGAAGGGGTGGAGAGAGGGAGTGAGAGTGAAAATGAGATGGATATGGAGGACtga
Protein Sequence: MSSDDSDDEPLAVLASKKKTDYEVEIFPVVENKNRKKKTFSAKKPCDVSIELQPKEEYVPVTIERPADVWLYLKDLNPNGPYSCLLCSEWFLHKTKIVIHYVVNHKKDFCGICRYFVPDRISWLSHLNFHNPWHCSQCPETFTTEALLREHFSFQHNLVHCRLCYTRLIDGEEYQTHLFQKHSVTKISVINEESFWEIDQENQKYHCILCTKTSNDIQTYSNHYMAYHHMTLKCLAPLISGKNWNFPVHGAEITVDFIHRQLKPFEKFGYLNLDTKPFSLMENKGIEEQSKPFQLVSDMLKEEYSSEPDEIAGNIESDELAIGDAERNNYQELESKINTMDDLVLEEITKLYKGEEDFDCTQVELIMLQKCYFDYVNDTLNKINLNIMPQVSTIIYKPTDHIVTIFCDLCKTQFKKVNTFTQHMVKMHGLKIIPTFSCRVCAVTFETYPELEQHEIEELGDFDDLWICQFCEKEFDNREQTRQHLTEHWDALEYDNCFSPHLGFKCRYCPTLFWNETDREIHQVRVHSQKHAQDYYKCEGCDELLSDKVWYIHHYLSKHTPVENPDSILHISTFLLKCCICSVVFQNVDDIRNHFNDKHPDERKVFCSLDTCQYKPFSHKKSFQLHLKSCHSTKKRPEEFSCQYCGKEFNNPRSCASHTQQAHGGAGRFNCTYCGKEFNNSRLSDAHTQQAHGGAGRFNFTVCEEPLMTADERKIHYLLMHPGRHPFQCRDCDKSFQYKSSLYLHRKEHAPDKPDYTCSYCGKIFLKRDSFREHVMIHEGPKHACSYCPMVFVQRSNMLRHERRHTGERPYACQFCPKTFSDKGACSSHARTHQKLPAFPCMYCGQTFAQKSKLTYHIRKHTGENLETCPHINCGKIFTSPCSLREHMKIHQKKQVLDPVKCPLCSKSFQDEKYMMRHLRGTHTNTMYPCPLCKKKLHSPAGLRDHVITHSGSKAYKCKQCSKSYNVKRTMIRHLRRRHSLKAAETTLSEFYTKLDPRNCRLDLDETTMTSIFGPPKNIIDAVNFTKLNKLKLRLSKDYSREDSTSESEIPPIESVQVKIECEDVDEPESELQPTDFVSVKIEGVERGSESENEMDMED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00699489; iTF_00700366; iTF_00704295; iTF_00705342; iTF_00701324; iTF_00696696; iTF_00703288; iTF_00702267; iTF_00698550;
90% Identity: iTF_00700366;
80% Identity: -