Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: -
Assembly: GCA_943735975.1
Location: CALSER010000023.1:798450-807369[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.5 88 4.1 0.1 3 23 111 131 109 131 0.95

2 20 0.0033 0.2 12.5 1.0 2 23 135 157 134 157 0.92

3 20 0.11 6.3 7.7 1.7 3 23 407 428 405 428 0.94

4 20 0.56 33 5.4 0.0 1 19 436 454 436 456 0.95

5 20 0.036 2.1 9.2 0.6 2 23 467 488 466 488 0.94

6 20 4.5 2.7e+02 2.6 0.6 1 23 504 527 504 527 0.84

7 20 0.0061 0.36 11.6 0.6 1 23 536 559 536 559 0.98

8 20 1.2 69 4.4 1.3 2 23 577 599 576 599 0.90

9 20 1.3 78 4.3 3.1 5 23 611 631 606 631 0.84

10 20 0.01 0.6 10.9 2.2 1 23 640 663 640 663 0.90

11 20 2.4 1.4e+02 3.4 0.1 1 23 668 691 668 691 0.92

12 20 7.9e-05 0.0046 17.6 3.1 1 23 697 719 697 719 0.98

13 20 0.00043 0.025 15.2 1.0 1 23 726 748 726 748 0.98

14 20 3.9e-05 0.0023 18.5 1.4 1 23 753 775 753 775 0.96

15 20 0.003 0.17 12.6 1.8 1 23 781 803 781 803 0.97

16 20 1.6e-06 9.2e-05 22.9 1.5 1 23 809 831 809 831 0.98

17 20 6.4e-05 0.0038 17.8 2.3 2 23 838 861 838 861 0.96

18 20 0.0018 0.1 13.3 0.6 2 23 871 893 870 893 0.96

19 20 0.0022 0.13 13.0 0.2 1 23 898 920 898 920 0.98

20 20 0.00038 0.022 15.4 3.8 1 23 926 949 926 949 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.5	88	4.1	0.1	3	23	111	131	109	131	0.95
2	20	0.0033	0.2	12.5	1.0	2	23	135	157	134	157	0.92
3	20	0.11	6.3	7.7	1.7	3	23	407	428	405	428	0.94
4	20	0.56	33	5.4	0.0	1	19	436	454	436	456	0.95
5	20	0.036	2.1	9.2	0.6	2	23	467	488	466	488	0.94
6	20	4.5	2.7e+02	2.6	0.6	1	23	504	527	504	527	0.84
7	20	0.0061	0.36	11.6	0.6	1	23	536	559	536	559	0.98
8	20	1.2	69	4.4	1.3	2	23	577	599	576	599	0.90
9	20	1.3	78	4.3	3.1	5	23	611	631	606	631	0.84
10	20	0.01	0.6	10.9	2.2	1	23	640	663	640	663	0.90
11	20	2.4	1.4e+02	3.4	0.1	1	23	668	691	668	691	0.92
12	20	7.9e-05	0.0046	17.6	3.1	1	23	697	719	697	719	0.98
13	20	0.00043	0.025	15.2	1.0	1	23	726	748	726	748	0.98
14	20	3.9e-05	0.0023	18.5	1.4	1	23	753	775	753	775	0.96
15	20	0.003	0.17	12.6	1.8	1	23	781	803	781	803	0.97
16	20	1.6e-06	9.2e-05	22.9	1.5	1	23	809	831	809	831	0.98
17	20	6.4e-05	0.0038	17.8	2.3	2	23	838	861	838	861	0.96
18	20	0.0018	0.1	13.3	0.6	2	23	871	893	870	893	0.96
19	20	0.0022	0.13	13.0	0.2	1	23	898	920	898	920	0.98
20	20	0.00038	0.022	15.4	3.8	1	23	926	949	926	949	0.98

Sequence Information

Coding Sequence: ATGTCGACTTCTGACGACTCAGACGACGAGCCTCTAGCAGTTCTGGCTTCGAAGAAGAAAACTGATTATGAAGTTGAAATATTTCCTGTAGTTGAGGATAAGAAGCGAAAGAAGAAAACTGTCTTAGCTAAAAAGCCCTGCGATGTGTCCATAGAACTTCAATCAAAGGAAGAGTATGTGCCTGTAACAATTGAGAGACCAGCTGATGTTTGGCTGTACCTCAAAGATCTGAATCCGAATGGGCCATACAGCTGCTTACTATGCTCTGAATGGTTCCTACACAAGACTAAAATAGTCATTCACTATGTTGTAAATCATAAAAAGGACTTTTGTGGTATTTGCAGATATTTTGTACCCGATAGAGAATCCTGGCTCGCCCACTTGAATTTCCACAACCCTTGGCACTGTTCTCAATGTCCAGAGACCTTCACTACAGAAGCTCTTCTTCGAGAACACTTCAGCTCACAGCACAACCTGGTCCATTGCAGGCTCTGCTACACTCGCCTTATTGATGGGGAAGAGTATCGAACACATCTCTTCCAAAAGCACAGTGTTACCAAGATTTCTGCGATAAATGAAGAAAGCTTCTGGGAGATTGACCAAGAAAACCAAAAGTACTATTGCATTCTCTGCACCAAAACCAGCAATGACATACAGACATACTCAAATCACTACATGGCATACCATCACATGACATTGAAGTGTCTCGCCCCTCTAATCTCTGGAAAGAACTGGAACTTTCCTGTTCATGGGGCTGAAATAACAGTCGACTTCATCCACCGACAGCTTAAAGCTTTTGAAAAGTTTGGTTATCTTAATCTGGACACTAAAACATTTAGTCTCATGGAGAATGAAGGAAATGAACTATCTAGGCCCTACCAGCTTGTAACTGATATGGTAAAAGAAGAATGTGTAAGTGAGCCTGATGAAATTGCTGGTAACACTGAAAGTGATGAGCTAGCAATTGGTGATGCTGAAATAAACAACTACCAAGAGCAGGAATCCAAGATGGACACTATGGATGATCTTGTTCGCGAAGAAATCACAAAATTGTACAAAGGAGAAGAGGATTTTGACAGCACACAAATAGAACTGATAATGCTACAGAAGTGTTACTTCGACTATGTCAATGACACTCTGAATAAAATCAACTCAAACATCATGCCTCAGGTCTCTACAATAATCTACAAACCCACTGATCACATAGTCACAATATTCTGCGACCTGTGCAAAACGCAATTCAAAAAGGTCAACACCTTTACCCAGCACATGGTCAAAATGCATGGATTAAAAATCACCCCTACATTTTCATGTCGAGTTTGTGCAGTAACTTTTGAGACATACCCTGAGCTTGAGCAGCATGAGATTGAAGAGCTGGGAGACTTCGATGACTTATGGATCTGTCAGTTTTGTGAGAAGGAGTTTGACAATCGCGAGCAGACAAGACAACATCTAACGGAGCATTGGGATGTGATAGAGTATGATAACTGCTTCAGTCCACACTTGGGGTTCAAGTGTAGGTACTGCCCCACTTTGTTCTGGAATGAGACTGATCGGGAGACTCATCAAGTGAGGGTACATGCACAGAAGCATGCTGAGGACTATTATAAGTGTGAGGGGTGTGGTGAGCTTCTCAGTGATAAGGTTTGGTACATCCACCACTACCTAACCAAGCACACATCAGTAGAAAACCCAGACAGCATCCTCCATATATCCACCTTCCTACTAAAATGCTGCATCTGCTCCGTAGTCTTCCAGAATGTGGATGATGTCAGGAACCATTTCAATGATAAACACCCTGATGCAAGGAAAGTGTTCTGTTCTTTGGATACTTGTCAGTACAAGCCTTTTAGTCACAAGAAGTCTTTTCAATTGCATTTGAAGTCATTCCACAACACAAAGAAGCGTCCAGAAGGATACTCGTGCCAGTACTGCGGCAAAGAGTTCAACAATCCCCGCACGTGCGCTTCGCACACGCAGCAGGCGCACGGCGAGGGACGGTTCAACTGTACTGTCTGCGAGGAGCCGCTCATGACTGCAGATGAACGAAAGATCCACTACCTGCTACTGCATCCGGGCCGCCACCCGTTCCAATGCCGCGACTGCGACAAATCATTCCAGTACAAATCTTCTCTCTACCTCCATCGGAAAGAACACGCGCCAGACAAACCTGACTACACGTGTAACTACTGCGGAAAGATATTCTTGAAACGCGACTCCTTCCGAGAACACGTGATGATCCACGAAGGTCCGAAACACGCCTGCTCCTACTGCCCCATGGTCTTCGTACAGCGGTCCAACATGTTGCGGCACGAACGGAGGCATACGGGGGAACGGCCCTACGCCTGTCAGTTCTGTCCTAAGACGTTCTCTGATAAGGGAGCTTGCTCGTCACATGCAAGGACCCATCAAAAACTGCCGGCGTTCCCTTGCATGTATTGCGGACAGACCTTCGCGCAGAAGTCTAAACTTACTTACCATATTAGAAAACATACGGGGGAAAATCTAGAAACATGTCCCCATATTAACTGCGGCAAGATCTTCACCAGTCCTTGCTCACTGCGAGAACACATGAAGATACATCAAAAGAAGCAAGTCCTGGAGCCTGTCAAATGTCCGTTATGCTCGAAATCCTATCAAGACGAGAAGTACATGATGCGTCACCTACGAGCCACTCACACGAACACACTCTACCCCTGCCCGCTTTGCAAGAAGAAACTGCACAGCCCAGCGGGGCTAAGAGATCACGTGATCACGCATAGCGGCAGCAAGGCTTATAAGTGCAAGCAATGCTCAAAATCCTACAACGTAAAGCGCACAATGATAAGGCACCTCCGACGTCGCCACAGCCTGAAAGCCTCCGAGGCCACCCTATCCGACCACTACACCAAACAGGACCCTAGAAACTGCAAATTAAACCTAGACGAAACAACTATGACCAGCATATTCGGACCTCCTAAAACTATCATCGATGCTGTCAACTTTACAAAATTAAGCAAGCTTAAGCTTAGATTGGGTAAAGATTATTCTAGAGAGGATAGTGCTAGTGAGTCGGAGATACCGCCGATAGAAACAGTTCAAGTGAAGATTGAATGTGAAGAGATAGAGGAGCATGAGAGTGATTTGCAGCCAACTGATTTTGTCAGTGTGAAGATTGAAGGGATGGAGCGAGGCAGTGAGAGTGAATATGAGGAGATGGATATGGAGGACTGA
Protein Sequence: MSTSDDSDDEPLAVLASKKKTDYEVEIFPVVEDKKRKKKTVLAKKPCDVSIELQSKEEYVPVTIERPADVWLYLKDLNPNGPYSCLLCSEWFLHKTKIVIHYVVNHKKDFCGICRYFVPDRESWLAHLNFHNPWHCSQCPETFTTEALLREHFSSQHNLVHCRLCYTRLIDGEEYRTHLFQKHSVTKISAINEESFWEIDQENQKYYCILCTKTSNDIQTYSNHYMAYHHMTLKCLAPLISGKNWNFPVHGAEITVDFIHRQLKAFEKFGYLNLDTKTFSLMENEGNELSRPYQLVTDMVKEECVSEPDEIAGNTESDELAIGDAEINNYQEQESKMDTMDDLVREEITKLYKGEEDFDSTQIELIMLQKCYFDYVNDTLNKINSNIMPQVSTIIYKPTDHIVTIFCDLCKTQFKKVNTFTQHMVKMHGLKITPTFSCRVCAVTFETYPELEQHEIEELGDFDDLWICQFCEKEFDNREQTRQHLTEHWDVIEYDNCFSPHLGFKCRYCPTLFWNETDRETHQVRVHAQKHAEDYYKCEGCGELLSDKVWYIHHYLTKHTSVENPDSILHISTFLLKCCICSVVFQNVDDVRNHFNDKHPDARKVFCSLDTCQYKPFSHKKSFQLHLKSFHNTKKRPEGYSCQYCGKEFNNPRTCASHTQQAHGEGRFNCTVCEEPLMTADERKIHYLLLHPGRHPFQCRDCDKSFQYKSSLYLHRKEHAPDKPDYTCNYCGKIFLKRDSFREHVMIHEGPKHACSYCPMVFVQRSNMLRHERRHTGERPYACQFCPKTFSDKGACSSHARTHQKLPAFPCMYCGQTFAQKSKLTYHIRKHTGENLETCPHINCGKIFTSPCSLREHMKIHQKKQVLEPVKCPLCSKSYQDEKYMMRHLRATHTNTLYPCPLCKKKLHSPAGLRDHVITHSGSKAYKCKQCSKSYNVKRTMIRHLRRRHSLKASEATLSDHYTKQDPRNCKLNLDETTMTSIFGPPKTIIDAVNFTKLSKLKLRLGKDYSREDSASESEIPPIETVQVKIECEEIEEHESDLQPTDFVSVKIEGMERGSESEYEEMDMED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00706303;
90% Identity: iTF_00700366;
80% Identity: -