Basic Information

Insect: Eupithecia exiguata
Gene Symbol: -
Assembly: GCA_947086465.1
Location: OX352239.1:10619543-10627319[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.4 92 4.1 0.2 3 23 110 130 108 130 0.95

2 20 0.0049 0.32 11.8 0.8 2 23 134 156 133 156 0.90

3 20 0.1 6.4 7.7 1.7 3 23 407 428 405 428 0.94

4 20 0.53 34 5.4 0.0 1 19 436 454 436 456 0.95

5 20 0.034 2.2 9.2 0.6 2 23 467 488 466 488 0.94

6 20 4.8 3.1e+02 2.4 0.4 1 23 504 527 504 527 0.81

7 20 0.018 1.2 10.0 0.7 1 23 536 559 536 559 0.97

8 20 1.1 71 4.4 1.3 2 23 577 599 576 599 0.90

9 20 1.2 80 4.3 3.1 5 23 611 631 606 631 0.84

10 20 0.0094 0.6 11.0 2.3 1 23 640 663 640 663 0.91

11 20 2.3 1.5e+02 3.4 0.1 1 23 669 692 669 692 0.92

12 20 7.4e-05 0.0047 17.6 3.1 1 23 698 720 698 720 0.98

13 20 0.00041 0.026 15.2 1.0 1 23 727 749 727 749 0.98

14 20 3.7e-05 0.0024 18.5 1.4 1 23 754 776 754 776 0.96

15 20 0.0028 0.18 12.6 1.8 1 23 782 804 782 804 0.97

16 20 1.5e-06 9.4e-05 22.9 1.5 1 23 810 832 810 832 0.98

17 20 6.1e-05 0.0039 17.8 2.3 2 23 839 862 839 862 0.96

18 20 0.00041 0.026 15.2 0.7 2 23 872 894 871 894 0.96

19 20 0.0021 0.13 13.0 0.2 1 23 899 921 899 921 0.98

20 20 0.00078 0.05 14.3 5.7 1 23 927 950 927 950 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.4	92	4.1	0.2	3	23	110	130	108	130	0.95
2	20	0.0049	0.32	11.8	0.8	2	23	134	156	133	156	0.90
3	20	0.1	6.4	7.7	1.7	3	23	407	428	405	428	0.94
4	20	0.53	34	5.4	0.0	1	19	436	454	436	456	0.95
5	20	0.034	2.2	9.2	0.6	2	23	467	488	466	488	0.94
6	20	4.8	3.1e+02	2.4	0.4	1	23	504	527	504	527	0.81
7	20	0.018	1.2	10.0	0.7	1	23	536	559	536	559	0.97
8	20	1.1	71	4.4	1.3	2	23	577	599	576	599	0.90
9	20	1.2	80	4.3	3.1	5	23	611	631	606	631	0.84
10	20	0.0094	0.6	11.0	2.3	1	23	640	663	640	663	0.91
11	20	2.3	1.5e+02	3.4	0.1	1	23	669	692	669	692	0.92
12	20	7.4e-05	0.0047	17.6	3.1	1	23	698	720	698	720	0.98
13	20	0.00041	0.026	15.2	1.0	1	23	727	749	727	749	0.98
14	20	3.7e-05	0.0024	18.5	1.4	1	23	754	776	754	776	0.96
15	20	0.0028	0.18	12.6	1.8	1	23	782	804	782	804	0.97
16	20	1.5e-06	9.4e-05	22.9	1.5	1	23	810	832	810	832	0.98
17	20	6.1e-05	0.0039	17.8	2.3	2	23	839	862	839	862	0.96
18	20	0.00041	0.026	15.2	0.7	2	23	872	894	871	894	0.96
19	20	0.0021	0.13	13.0	0.2	1	23	899	921	899	921	0.98
20	20	0.00078	0.05	14.3	5.7	1	23	927	950	927	950	0.97

Sequence Information

Coding Sequence: ATGTCTTCCGACGACTCAGACGACGAGCCTTTAGCAGTTCTAGCTTCAAAGAAGAAAACTGACTATGAAGTTGAAATATTTCCTGTCATTGAGAATAAGAGCCGAAAGAGGAAAGCTTTCTCAGCCAAAAAGCCCTGTGATGTTTCCATAGAACTTCAAACAAAGGAAGAGTATGTGCCTGTAACTATTGAGAGACCAGCTGATGTTTGGCTGTACCTCAAAGATCTGAATCCGAATGGGCCATACAGCTGCTTACTATGCTCTGAATGGTTCCTACACAAGACTAAAATAGTCATTCACTATGTTGTTAATCATAAAAAGGACTTTTGTGGTATTTGCAGATATTTTGTACCTGATAGAGAATCCTGGCTCAACCACTTAAACTTCCATAATCCTTGGCATTGTTCTCAATGTCCTGAGACCTTCACTACAGAAGCTCTTCTCCGAGAACACTTCAGCTTACAGCACAACCTGGTTCACTGCAGGCTCTGCTACACTCGCCTTATTGATGGGGAGGAATACCAAACACATCTCTTCCAAAAGCACAGCGTTACCAAGATTTCTGTGATAAATGACGAATGCTTCTGGGAGATTGACCAAGAAAACCAAAAGTACCATTGCATTCTCTGCACCAAAACCAGCAATGACATACAGACATACTCAAATCACTACATGGCATACCATCACATGACATTGAAGTGTCTTGCCCCTCTGATCTCTGGAAAAAACTGGAACTTTCCTGTTCATGGTGCTGAAATAACAGTCGACTTCATTCACCGACAGCTCAAAGCTTTTGATAAGTTTGGTTATCTAAATCTGGACACAAAACTATTTAGTCTCATGGAGAATAGAGAAATCGAAGAACAATCAAAGCCTTTCCAGCTTGTGTCTGATATTTTAAAAGAAGAATATTCAAGTGAGCCTGATGAAATTGCTGGTAACATTGGAATTGACGAGCTAGCGACTGGTGATGCTGAAAGAAACAACTACCAAGAGCTGGAATCCAAGATGGACACTATGGATGAACGTGTTCGCGAGGAAATCACAAAATTGTACAAAGGAGAAGAGGATTTTGACAGCACACAAGTAGAACTGATCATGCTACAGAAGTGTTACTTTGACTATGTAAATGACATGCTAAATAAAATAAACTCAAACATCATGCCTCCGATTTCTACAATAATCTACAAACCCACTGATCACATAGTCACAATATTCTGTGACCTGTGCAAAACACAATTCAAGAAGGTCAACACCTTTACTCAGCACATGGTCAAAATGCATGGATTAAAAATCACCCCTACATTTTCATGCCGAGTGTGTGCAGTGACTTTTGAGACTTACCCTGAGCTTGAGCAGCATGAAATTGAAGAGTTGGGAGATTTTGATGATCTATGGATATGTCAGTTTTGTGAGAAAGAGTTTGACAATCGGGAGCAGACAAGACAGCATCTGACGGAGCATTGGGATGCGATAGAGTATGATAACTGCTTCAGTCCGCATTTGGGGTTCAAGTGTAGGTACTGCCCAACCTTGTTCTGGAATGAGACAGATCGGGAGATTCATCAAGTGAGGGTACATTCACAAAAGCATGCTGAAGACTATTACAAATGTGAGGGATGTGGTGAGCTTCTCAGTGACAAGGTCTGGTACATCCACCACTTCCTAACCAAGCACACGCCAGTAGAAAACCCAGACAGTATCCTCCATATATCCACTTTCCTCCTGAAATGCTGCATCTGCTCCGTAGTCTTCCAGAATGTGGATGATGTCAGGAACCATTTCAATGATAAGCACCCTGATGAGAGGAAAGTGTTCTGTTCTTTGGATACTTGTCAGTACAAGCCTTTTAGTCATAAGAAGTCTTTTCAATTGCATTTGaagTCATTCCACAGCACAAAAAAGCGTCCAGAAGGATTCTCGTGTCAGTACTGCGGCAAGGAGTTCAACAACCCCCGGTCGTGCGCTTCGCACACGCAGCAGGCGCACGGCGGCGCGGGACGGTTCAACTGCACTGTCTGTGAGGAGCCGCTCATGACTGCAGATGAACGAAAGATCCACTACCTGCTCCTGCACCCGGGCCGCCATCCGTTCCAATGCCGCGACTGCGATAAATCATTCCAGTACAAATCTTCTCTCTACCTCCATCGGAAAGAACACGCGCCAGACAAACCTGACTACACGTGTAACTACTGTGGGAAGATATTCTTGAAACGCGACTCCTTCCGGGAACACGTGATGATACACGAGGGTCCGAAACACGCCTGTTCATACTGCCCCATGGTCTTCGTACAGCGGTCCAACATGTTGCGGCACGAACGGAGGCATACGGGAGAACGGCCCTACGCCTGTCAGTTCTGTCCTAAGACGTTCTCCGATAAGGGGGCTTGCTCGTCACATGCAAGGACCCATCAAAAACTGCCGGCTTTCCCTTGCATGTATTGCGGACAAACCTTCGCGCAAAAGTCGAAGCTTACTTACCATATTAGAAAACACACAGGAGAGAATCTAGAAACGTGTCCCCATATTAACTGCGGGAAGATCTTCACCAGTCCGTGCTCACTGCGGGAACACATGAAGATACACCAGAAGAAGCAAGTTTTGGACCCGGTCAAATGTCCGCTTTGTTCGAAATCCTTCCAAGACGAGAAGTACATGATGCGTCACCTCCGAGGCACTCACACGAACACAGTCTACCCCTGTCCGCTGTGCAAGAAGAAACTGCACAGTCCGGCGGGGCTAAGAGATCACGTGATCACGCATAGCGGCAGCAAGGTTTATAAGTGCAAGCAATGCTCAAAATCCTTCAACGTAAAGCGCACAATGATAAGGCACCTCCGACATCGCCACAGTCTGATAGCCTCTGAAACTCTATCTGAATACTACACCAAACTGGACCCTAGAAACTGCAGATTAAACCTAGATGAAACGACAATGACCAGCATATTCGGACCTCCTAAAAATGTCATTGATGCTGTCAACTTTACAAAGTTAAACAAGCTTAAGCTTAGATTGAGTAAAGATTATTCCAGAGAGGATAGTACCAGTGAGTCGGAAATACCGCCGATAGAAACAGTGCAAGTGAAGATAGAATGCGAAGAGGTAGAGGAGCCTGAGAATGAGTTGCAGCCAACTGATTTTGTCAGTGTGAAGATTGAAGGAGTGGAAAGAGGGAGTGAGAGTGAAAATGAGATGGATATGGAGGACTGA
Protein Sequence: MSSDDSDDEPLAVLASKKKTDYEVEIFPVIENKSRKRKAFSAKKPCDVSIELQTKEEYVPVTIERPADVWLYLKDLNPNGPYSCLLCSEWFLHKTKIVIHYVVNHKKDFCGICRYFVPDRESWLNHLNFHNPWHCSQCPETFTTEALLREHFSLQHNLVHCRLCYTRLIDGEEYQTHLFQKHSVTKISVINDECFWEIDQENQKYHCILCTKTSNDIQTYSNHYMAYHHMTLKCLAPLISGKNWNFPVHGAEITVDFIHRQLKAFDKFGYLNLDTKLFSLMENREIEEQSKPFQLVSDILKEEYSSEPDEIAGNIGIDELATGDAERNNYQELESKMDTMDERVREEITKLYKGEEDFDSTQVELIMLQKCYFDYVNDMLNKINSNIMPPISTIIYKPTDHIVTIFCDLCKTQFKKVNTFTQHMVKMHGLKITPTFSCRVCAVTFETYPELEQHEIEELGDFDDLWICQFCEKEFDNREQTRQHLTEHWDAIEYDNCFSPHLGFKCRYCPTLFWNETDREIHQVRVHSQKHAEDYYKCEGCGELLSDKVWYIHHFLTKHTPVENPDSILHISTFLLKCCICSVVFQNVDDVRNHFNDKHPDERKVFCSLDTCQYKPFSHKKSFQLHLKSFHSTKKRPEGFSCQYCGKEFNNPRSCASHTQQAHGGAGRFNCTVCEEPLMTADERKIHYLLLHPGRHPFQCRDCDKSFQYKSSLYLHRKEHAPDKPDYTCNYCGKIFLKRDSFREHVMIHEGPKHACSYCPMVFVQRSNMLRHERRHTGERPYACQFCPKTFSDKGACSSHARTHQKLPAFPCMYCGQTFAQKSKLTYHIRKHTGENLETCPHINCGKIFTSPCSLREHMKIHQKKQVLDPVKCPLCSKSFQDEKYMMRHLRGTHTNTVYPCPLCKKKLHSPAGLRDHVITHSGSKVYKCKQCSKSFNVKRTMIRHLRHRHSLIASETLSEYYTKLDPRNCRLNLDETTMTSIFGPPKNVIDAVNFTKLNKLKLRLSKDYSREDSTSESEIPPIETVQVKIECEEVEEPENELQPTDFVSVKIEGVERGSESENEMDMED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00706303;
90% Identity: iTF_00700366;
80% Identity: -