Basic Information

Insect: Eupithecia subumbrata
Gene Symbol: -
Assembly: GCA_949316285.1
Location: OX438636.1:4017122-4032983[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.7 1.4e+02 4.1 0.1 3 23 110 130 108 130 0.95

2 20 0.0036 0.31 12.5 0.1 2 23 134 156 133 156 0.93

3 20 0.12 10 7.7 1.7 3 23 406 427 404 427 0.94

4 20 0.63 54 5.4 0.0 1 19 435 453 435 455 0.95

5 20 0.054 4.6 8.8 1.1 2 23 466 487 465 487 0.94

6 20 5.8 4.9e+02 2.4 0.4 1 23 503 526 503 526 0.81

7 20 0.067 5.7 8.5 1.0 1 23 535 558 535 558 0.98

8 20 2 1.7e+02 3.8 1.3 2 23 576 598 575 598 0.90

9 20 1.5 1.3e+02 4.3 3.1 5 23 610 630 605 630 0.84

10 20 0.005 0.43 12.1 1.6 1 23 639 662 639 662 0.92

11 20 2.7 2.3e+02 3.4 0.1 1 23 667 690 667 690 0.92

12 20 8.8e-05 0.0076 17.6 3.1 1 23 696 718 696 718 0.98

13 20 0.00048 0.041 15.2 1.0 1 23 725 747 725 747 0.98

14 20 4.4e-05 0.0038 18.5 1.4 1 23 752 774 752 774 0.96

15 20 0.0033 0.28 12.6 1.8 1 23 780 802 780 802 0.97

16 20 1.8e-06 0.00015 22.9 1.5 1 23 808 830 808 830 0.98

17 20 7.2e-05 0.0062 17.8 2.3 2 23 837 860 837 860 0.96

18 20 0.00042 0.036 15.4 0.7 2 23 870 892 869 892 0.95

19 20 0.0024 0.21 13.0 0.2 1 23 897 919 897 919 0.98

20 20 0.00043 0.037 15.4 3.8 1 23 925 948 925 948 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.7	1.4e+02	4.1	0.1	3	23	110	130	108	130	0.95
2	20	0.0036	0.31	12.5	0.1	2	23	134	156	133	156	0.93
3	20	0.12	10	7.7	1.7	3	23	406	427	404	427	0.94
4	20	0.63	54	5.4	0.0	1	19	435	453	435	455	0.95
5	20	0.054	4.6	8.8	1.1	2	23	466	487	465	487	0.94
6	20	5.8	4.9e+02	2.4	0.4	1	23	503	526	503	526	0.81
7	20	0.067	5.7	8.5	1.0	1	23	535	558	535	558	0.98
8	20	2	1.7e+02	3.8	1.3	2	23	576	598	575	598	0.90
9	20	1.5	1.3e+02	4.3	3.1	5	23	610	630	605	630	0.84
10	20	0.005	0.43	12.1	1.6	1	23	639	662	639	662	0.92
11	20	2.7	2.3e+02	3.4	0.1	1	23	667	690	667	690	0.92
12	20	8.8e-05	0.0076	17.6	3.1	1	23	696	718	696	718	0.98
13	20	0.00048	0.041	15.2	1.0	1	23	725	747	725	747	0.98
14	20	4.4e-05	0.0038	18.5	1.4	1	23	752	774	752	774	0.96
15	20	0.0033	0.28	12.6	1.8	1	23	780	802	780	802	0.97
16	20	1.8e-06	0.00015	22.9	1.5	1	23	808	830	808	830	0.98
17	20	7.2e-05	0.0062	17.8	2.3	2	23	837	860	837	860	0.96
18	20	0.00042	0.036	15.4	0.7	2	23	870	892	869	892	0.95
19	20	0.0024	0.21	13.0	0.2	1	23	897	919	897	919	0.98
20	20	0.00043	0.037	15.4	3.8	1	23	925	948	925	948	0.98

Sequence Information

Coding Sequence: ATGTCTTCCGACGACTCGGACGACGAGCCTTTAGCAGTTCTGGCTTTGAAGAAGAAAACTGACTATGAAGTTGAAATATATCCTGTCGTTGAGAATAAGAGCCAAAACAGGAAAATTTTCTCAGCCAAAAAGCCCTGCGATGTGTCCATAGAAATTCAAACAAAGGAAGAGTATGTGCCTGTCACTATTGAGAGACCTGCTGATGTTTGGCTGTACCTCAAAGATCTGAACCCTAATGGGCCATACAGCTGCTTACTATGCTCAGAATGGTTCCTACACAAGACCAAAATAGTCATTCACTATGTTGTAAATCATAAAAAGGACTTTTGTGGTATTTGCAGATATTTTGTTCCTGATAGAGAATCCTGGCTTGCCCACTTGAACTTCCACAACCCTTGGCGCTGTTCTCAATGTCCCGAGACCTTTCCTACAGAAGCACTCCTTCGAGAACATTTCAGTGTACAGCACAACCTGGTTCACTGCAGGCTCTGCTACACTCGTCTTATTGACGGTGAGGAGTACCAAACACATCTCTTCCATAAGCACAGTGTTACCAAGATTTCTGTAATAAACGAAGAAAGCTTCTGGGAGATTGACCAAGAAAACGAAAAGTATCATTGCATTCTCTGCACCAAAACCAGCAATGACATACAGACATACTCAAATCATTACATGGCATACCATCACATGACATTGAAGTGTCTCGCGCCTCTGATCTCCGGAAAGAACTGGAACTTCCCTGTTCATGGTGCTGAAATAACAGTAGATTTCATTCACCGACAGCTCAAACCTTTTGATAAGTTTGGTTATCTAAATCTGGACACAAAACCGTTCAGCCTAATGGAGGAAGCAACTGAAGAACAATCAAAGTCCCTCCAGCTTGTGACTGACATGGTAAAAGAAGAATATTCAAGTGAGCCTGATGAAATTGCTGGTAACATTGAAAGTGACGAGCTAGCAACTGGTGACGCTGAAAGCAACAACTACCGAGAGCTGGATTCCAACATGGACACTATGGATGATCTTGTTCGGGAGGAAATCACAAAATTATACAAAGGGGAAGAAGATTTTGACAGCACACAAGTAGAACTGGTCATGCTACAGAAGTGTTACTTCGATTATGTCAATGACACGCTAAATAAAATCAACTCGAACACCATGCCTCAGGTTTCTACCATAACCTACAAACCCACTGATCACATAGTCACAATATTCTGCGACCTATGCAAAACACAATTCAAAAAGGTCAACACCTTTACTCAGCACATGGTCAAAATGCATGGATTAAAAATCACCCCTACGTTTTCATGCAGAGTGTGCGCAGTAACTTTTGAGACTTACCCCGAGCTTGAGCAGCATGAGATTGAAGAGTTGGCAGATTTCGATGACCTATGGATCTGTCAGTTTTGTGAAAAAGAGTTTGACAACCGCAAGCAAACAAGACAGCATTTGACAGAGCATTGGGATGTGATAGAGTATGATAACTGCTTCAGCCCACATTTGGGGTTCAAGTGTAGGTACTGTCCCACTTTGTTCTGGAATGAGACAGATCGGGAGATTCATCAAGTGAGGGTACATGCACAGAAGCACGCTGGGGACTATTACAAGTGTGAGGGATGCAGTGAGCTGCTCAGTGATAAGGTCTGGTACATTCACCACTACCTAACCAAGCACACATCAGTAGAAAACCCAGACAGCATTCTCCATATATCCACCTTCCTCCTAAAATGCTGCATCTGCTCCGTAGTCTTCCAGAATGTGGATGATATCAGGAACCATTTCAATGATAAGCACCCTGATGCGAGGAAGGTGTTCTGTTCTCTGGACACTTGTCAGTACAAGCCTTTTAGTCACAAGAAGTCTTTTCAATTGCATTTGAAGTCATTCCACAACACAAAGAAGCGTCCAGAAGAATTCTCGTGCCAGTACTGCGGCAAGGAGTTCAACAACCCCCGCTCGTGCGCTGCGCACACGCAGCAGGCGCACGGCGCGGCACGGTTCAACTGTACTGTCTGTGAGGAGCCGCTCATGACTGCAGATGAACGGAAGATCCACTACTTACTCCTGCACCCGGGTCGCCATCCGTTCCAATGCCGCGACTGCGACAAATCATTCCAGTACAAATCTTCTCTCTACCTCCATCGGAAAGAACACGCGCCAGACAAACCCGACTACACGTGTAACTACTGCGGGAAGATATTCTTGAAACGTGATTCCTTCCGGGAACACGTGATGATCCACGAAGGTCCGAAACACGCCTGTTCATACTGCCCCATGGTGTTCGTACAACGGTCCAACATGTTGCGGCACGAACGGAGGCATACAGGAGAACGGCCCTACGCCTGTCAGTTCTGTCCTAAGACATTCTCTGATAAGGGGGCCTGCTCGTCACATGCAAGGACCCATCAAAAACTGCCGGCGTTCCCTTGCATGTATTGCGGACAAACCTTCGCGCAGAAGTCGAAGCTTACTTACCATATCAGAAAACATACGGGAGAGAATCTAGAAACCTGTCCCCATATAAATTGCGGCAAGATCTTCACCAGTCCGTGTTCGCTGCGAGAACACATGAAGATACATCAGAAGAAGCAAGTCTTGGAGCCGATCAAATGTCCACTATGCTCAAAGTCCTTCCAAGACGAGAAGTACATGATGCGTCACCTCCGAGCCACTCACACGAACACGCTCTACCCCTGCCCGCTGTGCAAGAAGAAACTGCACAGTCCGGCCGGGCTAAGAGATCACGTGATCACGCATAGCGGCAGTAAGGCTTATAAGTGCAAGCAATGCTCGAAATCCTACAACGTAAAGCGCACAATGATAAGACACCTTCGACGTCGCCACAACCTAAAAGCCTCCGAAACCACCCTGTCTGAATACTACACCAAACTGGACCCAAGAAATTGCAGATTAAACCTAGACGAGACAACCATGACCAGCATATTCGGACCTCCTAAGACTATCATTGATGCTGTCAACTTCACAAAACTAAACAAGCTAAAGCTAAGATTAAGTAAAGATTATTCCAAAGAGGGTAGTACTAGTGAGTCAGAAATACCGCCGATAGAAACAGTGCAAGTGAAGATTGAATGCGAACAGCTTGATGAACCTGAGAGTGAGTTGCAGCCGACTGATTTTGTGAGTGTGAAGATTGAAGGGGTGGAGAGAGAGAGTGAGAATGAGGAGATGGATATGGAGGACTga
Protein Sequence: MSSDDSDDEPLAVLALKKKTDYEVEIYPVVENKSQNRKIFSAKKPCDVSIEIQTKEEYVPVTIERPADVWLYLKDLNPNGPYSCLLCSEWFLHKTKIVIHYVVNHKKDFCGICRYFVPDRESWLAHLNFHNPWRCSQCPETFPTEALLREHFSVQHNLVHCRLCYTRLIDGEEYQTHLFHKHSVTKISVINEESFWEIDQENEKYHCILCTKTSNDIQTYSNHYMAYHHMTLKCLAPLISGKNWNFPVHGAEITVDFIHRQLKPFDKFGYLNLDTKPFSLMEEATEEQSKSLQLVTDMVKEEYSSEPDEIAGNIESDELATGDAESNNYRELDSNMDTMDDLVREEITKLYKGEEDFDSTQVELVMLQKCYFDYVNDTLNKINSNTMPQVSTITYKPTDHIVTIFCDLCKTQFKKVNTFTQHMVKMHGLKITPTFSCRVCAVTFETYPELEQHEIEELADFDDLWICQFCEKEFDNRKQTRQHLTEHWDVIEYDNCFSPHLGFKCRYCPTLFWNETDREIHQVRVHAQKHAGDYYKCEGCSELLSDKVWYIHHYLTKHTSVENPDSILHISTFLLKCCICSVVFQNVDDIRNHFNDKHPDARKVFCSLDTCQYKPFSHKKSFQLHLKSFHNTKKRPEEFSCQYCGKEFNNPRSCAAHTQQAHGAARFNCTVCEEPLMTADERKIHYLLLHPGRHPFQCRDCDKSFQYKSSLYLHRKEHAPDKPDYTCNYCGKIFLKRDSFREHVMIHEGPKHACSYCPMVFVQRSNMLRHERRHTGERPYACQFCPKTFSDKGACSSHARTHQKLPAFPCMYCGQTFAQKSKLTYHIRKHTGENLETCPHINCGKIFTSPCSLREHMKIHQKKQVLEPIKCPLCSKSFQDEKYMMRHLRATHTNTLYPCPLCKKKLHSPAGLRDHVITHSGSKAYKCKQCSKSYNVKRTMIRHLRRRHNLKASETTLSEYYTKLDPRNCRLNLDETTMTSIFGPPKTIIDAVNFTKLNKLKLRLSKDYSKEGSTSESEIPPIETVQVKIECEQLDEPESELQPTDFVSVKIEGVERESENEEMDMED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00706303;
90% Identity: iTF_00700366;
80% Identity: -