Esub007599.3
Basic Information
- Insect
- Eupithecia subfuscata
- Gene Symbol
- -
- Assembly
- GCA_963564075.1
- Location
- OY751100.1:9233382-9236048[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-09 9.2e-06 26.1 0.0 1 35 15 49 15 55 0.93
Sequence Information
- Coding Sequence
- ATGCCGAAGGTTACGGatggaaaaaaatatacaaaaacatATACAGAAGAAGATGTAGAAAAAGCCTTGCAAGCCATAAAAAATGGAATGGGTAAGAAAACTGctgcaaataaatttaatatcccACGAGCAACTTTGCAGTTTCGCCTATCCAACCAGTTTGTCAAAAGTCGACCTGGTCCAGATACAGTTCTGTCTAGTGCAGAAGAACAAGAGATAGTTAAATGGATAATTGCAGCTTGTAGTAAAGGATTTCCACGGCGTAAAGAGGATGTCATAAAGAGCGTCAAACTGTATTTAGATGAACATCCCAGACCAAACAATTTTATAGATAATACACCAGGCGAGGGATGGTATAAACTGTTTTTGAAGAGGCATCCTGAGCTTTCTATACGAACATCAGAGGCTGTAACTTCAGCAAGCTCAAAGTTGTCAGAGAAGCAAATTAGAAACTGGTTTACACAAGTAGAAGAATATCTAAAAGAAAATGATCTCTTTCATATTTTGAGTGATCCATCTAGAGTTTATAATGGGGAtgaaacgaattttattttatgcccAAAGAACACCAAAGTTATTGCTTTAAAGGGAACCAAAAATGTATATGAGGTTGATCACGCTCAGGCTAAATCATGTGTTACTGTAATGTTCACATTTTCGGCGGATGGTGTAACAACACCACCTATGATTATTTACCCCTTAAAGAGAATGCGACCTGAGATTCAAAAGTCTGTGCCTAGCGATTGGGGTATAGGCTTGTCAGATAATGGATGGATGAAAGCCGAGCTCTTCATCCAGTACATACAGAATGTTCTCCATCCAGCGCTGGTGAAGATGAATATCACTTTTCCAGTAATTCTTTTTTTGGATGGACATAAAAGCCACACAACACTTCAGCTTACTCAACTTTGTCAAAATCTTGGTATAATACTTATAGCTCTATACCCTAACGCGACACGGATTTTACAACCAGCAGACGTAGCGGCCTTTCGCCCAATAAAAGTAATGTGGCGTAAAGCAGTCCTAGAATGGCGAACAGACAACTTAACAAAATCCTTACTAAAAACAGATGTTGCACCTATATTGGAGAAGCTTTTACCCAAATTAAATAAGACGACGTTGAAGAACGGCTTTGAAGCTTGTGGTTTATGCCCATTTAATCCAGATCACGTAGACtacacaaaatgtttaatgCCCTATAAACCAGCCCAAGAAATTTTGGATGACAACTGTTCTACAAGTCTTAACTATCAGACATTTGAAGAAATAGTTGGAGCACAGTTAATCAGAAAGATGAAAAATCAGGTGGTAGGAAAATCAATAGAAGCTAAAAAGCTTCACGACTTGTATAAATATCTCGTACCAAAAATTTCAACACACGAGTTATCGTCGCAAACAATAGAAACAACTTCTGAGGAACTAATGCAACACAAGGACAGGAGCAATTTAAATGAACAAAACGACGACGTTTCAGAAGATTTGACCACAATGGCAGCCCTCAATGAATTAATGACAATGTCAACAGAAATAGAATGTTTGCCAAATGAACCAGAACTGTCAACTCATGAATCTCAATCCAAAGACACTGGCACTTCTAAAACAAACACGATGGTTGACAATTATTCAGGAACCTCAGGATCAGGACACGAAAAACTTCTGAATGTTAAACTTCAGCATCAGGGGATTGAGGAATTACCTTTGGCATCCTGTATAAATCTTACATCGACAAACGATTCAGTATCAGAAGCTGTACAAACGGTTGAGGTTATTTCTGAGTGTGAAAGAGAAAAACAAACATATGTAATACCTATTCCATCCACCAGTCGTCAAAGTGTAGAGCTGATTGGAGACAAATGGGTACTAGTGGATGACATGCCAATCGAAGTCCCTTCAAAGACTCcaataaagaaacaaaatataaaagattttttaaagttGCCAAAGACTCCAATTAAAACACAAAAAGCTGGTATAGAACATCGCTCTTTTGTTTTAACGAGTAAAGATTGGGAGGCTGTAGAACtagaaaaacaacaaaaaaagatgAAAGAGATACAAGAAAAGGAGAACAAACGAATAGCAAGACTAGAAAAAGCCAAAGAGAAACGCttactcaaagaaaaaaaacaagctgaaactataaataaaaagaacaaagccaaaaatttaaatataattaagaaAAGTAAACCAAATTCTGATagtatcaaatcaaaaattgttatccaatcaaacattttaattaaaccTGCAAATAGAATCTCAAGTGATATTGAAGAAGAAAGAGAATatacaaaggaaataaaaaaagaacCTATGAACGAAGTTAAACCTGCAAATAGAATCTCAAGTGATATTGAAGAAGAAAGAgaatatacaaagaaaataaaaaaagaacatATAAACGAAGTTGAACCTGCAAATATGATTGCCCTGAAGGATATAAAAAACAGACCAATTTTAGATGCAGTTGAAAGAACCTTTAAAGAATCGGAACAAGTACAGATGGTAAAAAAAGAATTGAAGAAGGGACCAATTTTAGACGAACTTAAACCTCATAACATAACTTTTCGAGATTCAAGGGAAACTGGAAATGATGAGAGGATAAAAGCTAAAGTAAACAGATTGACAAATGAAGAATTGTTAAAAATGTTGGAAGATGATTAA
- Protein Sequence
- MPKVTDGKKYTKTYTEEDVEKALQAIKNGMGKKTAANKFNIPRATLQFRLSNQFVKSRPGPDTVLSSAEEQEIVKWIIAACSKGFPRRKEDVIKSVKLYLDEHPRPNNFIDNTPGEGWYKLFLKRHPELSIRTSEAVTSASSKLSEKQIRNWFTQVEEYLKENDLFHILSDPSRVYNGDETNFILCPKNTKVIALKGTKNVYEVDHAQAKSCVTVMFTFSADGVTTPPMIIYPLKRMRPEIQKSVPSDWGIGLSDNGWMKAELFIQYIQNVLHPALVKMNITFPVILFLDGHKSHTTLQLTQLCQNLGIILIALYPNATRILQPADVAAFRPIKVMWRKAVLEWRTDNLTKSLLKTDVAPILEKLLPKLNKTTLKNGFEACGLCPFNPDHVDYTKCLMPYKPAQEILDDNCSTSLNYQTFEEIVGAQLIRKMKNQVVGKSIEAKKLHDLYKYLVPKISTHELSSQTIETTSEELMQHKDRSNLNEQNDDVSEDLTTMAALNELMTMSTEIECLPNEPELSTHESQSKDTGTSKTNTMVDNYSGTSGSGHEKLLNVKLQHQGIEELPLASCINLTSTNDSVSEAVQTVEVISECEREKQTYVIPIPSTSRQSVELIGDKWVLVDDMPIEVPSKTPIKKQNIKDFLKLPKTPIKTQKAGIEHRSFVLTSKDWEAVELEKQQKKMKEIQEKENKRIARLEKAKEKRLLKEKKQAETINKKNKAKNLNIIKKSKPNSDSIKSKIVIQSNILIKPANRISSDIEEEREYTKEIKKEPMNEVKPANRISSDIEEEREYTKKIKKEHINEVEPANMIALKDIKNRPILDAVERTFKESEQVQMVKKELKKGPILDELKPHNITFRDSRETGNDERIKAKVNRLTNEELLKMLEDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00701905; iTF_00825656; iTF_01264484; iTF_01264486; iTF_01264488; iTF_01264489; iTF_00952658; iTF_01280200; iTF_01221478; iTF_01221479; iTF_01221480; iTF_01221481; iTF_00700045; iTF_00704922; iTF_00212394; iTF_00212392; iTF_00212393; iTF_00212395; iTF_00826890; iTF_00826889; iTF_01538687; iTF_01119267; iTF_01119272; iTF_01425004; iTF_01425003; iTF_00373965; iTF_01152077; iTF_01260045; iTF_00049838; iTF_01260046; iTF_00037747; iTF_00373966; iTF_00373967; iTF_00373942; iTF_01152079; iTF_01152078; iTF_01152080; iTF_00037746; iTF_00171698; iTF_00745620; iTF_01117141;
- 90% Identity
- iTF_01221478;
- 80% Identity
- -