Oinc011105.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Orthosia incerta
Gene Symbol
-
Assembly
GCA_948252205.1
Location
OX411741.1:2143661-2146225[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.2e-08 8.6e-05 23.4 0.0 3 35 16 48 15 52 0.90

Sequence Information

Coding Sequence
ATGCCGAAGGTTACGGTTGGAAAAAAATATTCAAAAGCATATACAGAAGATGTAGAAAAAGCCTTGCAAGCCATAAAAAATGGAATGGGTAAGAAAACTGCTGCAAATAAATTTAATATCCCACGGGCAACTTTGCAGTTTCGCCTATCCAACTTATTTGTTAAAAGTCGACCTGGTCCAGATACAGTTCTGACTGATGCAGAAGAAAAAGAGGTAGTTAAATGGATAATTTCAGCTTGTAGGAAAGGATTTCCACGGCGTAAAGAGGACGTCATAAAGAGTGTCAAACTGTATTTGGACGAAAATCCCAGACCAAACAGTTTTATAGATAATACACCAGGCGATGGATGGTATAAATTATTTTTGAAGAGGCATCCTGAGCTTTCTATACGAACATCAGAGGCTGTAACTTCAGCAAGCTCAAAATTGACAGAGAAGCAAATTAGAAATTGGTTTAAACAAGTAGAAGAATATCTGAAAGAAAATGATCTTTttaatattttgagtgatccatccagagtttacaatggggacgaaactaattttattttatgcccaaagaatactaaagttatcgctttaaggggaaccaaaaatgtgtatgaggtagatcacgctcagtctaaatcgtgtgttaccgtaatgtttacattttcggcggatggtgtaacaacacctcctatgattatttaccccttaaagagaatgcgacctgagattcaaaagtctgtgcctagcgagtggggcattggcttgtcagataatggatggatgaaggccgagcttttcattcagtacatacagaatgttctgcatccagcgctaatgaagaggaatatcacttttccagtaattctttttttggatgggcataaaagccacacaacacttcagcttactcaactttgtcaaaatcttggtataatacttatagctctataccctaacgcgacccggattttgcaaccagcagacgtagcggcgtttcgcccaataaaagttatgtggcgtaaagcagtcctggaatggcgtacagataacttaacgaaatccttactaaaaacagatgttgctcctATATTAGAGAAGCTTTTACCCAAATTAAACAAGACGACATTAAAGAACGGTTTTGAAGCTTGTGGTTTATGCCCATTTAATCCAGATCAAGTGGACTATACAAAATGTTTAATGCCCTCTAAACCAGTACAAGAAATTTTGGATGACAACTGTTCCACAAGTCTTAGCTATCAGACATTTGAAGAAATTGTTGGACCACAGCTAGTCCGAAAGATGAAGAATCAGATGGTAGGTAAATCAATAGAAGCTAAAAAGCTTTATGACTTGTATAAATATCTCGTACCAAAAATTTCAACACAAGAACCACAACAAGAGACAACTTCTATGGAACTAATACAACACAAGGACAGGAGCAATTTAAATGAACAAAACAACGATGGTTCAGAAGATTTGAACACAATGGCAGCCTTTAATGAATTAACGACAATGCCAACAGAAGTAGAACTTTTGCTAAATGAACCAGAACTGTCCCATGAACCTCAATCCGAAGACACTGGCATATCTAAAGCAAACACGATGGTTGTCGATTATTCAGAAACCTCAGGACACGAAATAGGTGGAGAGCATGTTGAACTTCAGAATCAGGTGGTTGAAGAATTACCTTTAGAATCCTGTATAATCTATTCATCAATAAACGATTCAATACCAGAAGCTGCACAAACGGTTGACGTTATTTCCGAATTTCAAAGAGAAAACCAGTCAATAACGCCAATAGATTTAATACCTATTCCATCCACCAGTCGTCAAAGTGTAGAGCTGATTGGTGGAACATGGGTACTGGTGGATGATATGCCAACCGAAGTCCCTACAAAGGCGCAAAATATAAACGATTTTTTAAAGTTACCTAAGACTCCAATTAAAACTCAGAAAGCTGGTACAGAACATCGCTCTTTTGTTTTGACTAGTAAAGATTGGGAAGCTGTAGAACTACAAAAACAACAAAAAAAGATGAAAGAGATACAAGAAAAGGAGAACAAACGAATAGAAAGACTAGAGAAAGCCAAAGAGAAACAATTACTCAAGGAAAAAAAACAAGCTGAAACTATACAGAAAAAGAACAAAGCCAAAGATTTAAAGTTAATTAAGAAAAGTAAACCAAACTCTGATAGTATCAAACCCAAAATTGTAATCCAATCAAACGTCTTGATTAAACCTGCAAATAGAATCTCAAGTGATATTGAAAAAGAAAGAGGATATACAAGGGAATTAAAAATAGAACCTATGAGCGAAGTTAAACCTGCAAATATTACTACCCTAAAGGAAATAAAAAACAGACCAATTTTAGATGCAGCTGAAACTGAAAATGAAAGAAGCTTTAAAGAATCGGAACAAGTAATGGTCAAAAAAGCATTAAAGAAAGGACCTATTTTAGATGAACCTGTAAATTTCAGAGTATCAAGGGAAACCAGAAAAGATAAGATAAAAGTTAAAGAAAATAGATTGAGACCAATGACAAATGAACTATTAAAAGTATTAGAAGATGATTAG
Protein Sequence
MPKVTVGKKYSKAYTEDVEKALQAIKNGMGKKTAANKFNIPRATLQFRLSNLFVKSRPGPDTVLTDAEEKEVVKWIISACRKGFPRRKEDVIKSVKLYLDENPRPNSFIDNTPGDGWYKLFLKRHPELSIRTSEAVTSASSKLTEKQIRNWFKQVEEYLKENDLFNILSDPSRVYNGDETNFILCPKNTKVIALRGTKNVYEVDHAQSKSCVTVMFTFSADGVTTPPMIIYPLKRMRPEIQKSVPSEWGIGLSDNGWMKAELFIQYIQNVLHPALMKRNITFPVILFLDGHKSHTTLQLTQLCQNLGIILIALYPNATRILQPADVAAFRPIKVMWRKAVLEWRTDNLTKSLLKTDVAPILEKLLPKLNKTTLKNGFEACGLCPFNPDQVDYTKCLMPSKPVQEILDDNCSTSLSYQTFEEIVGPQLVRKMKNQMVGKSIEAKKLYDLYKYLVPKISTQEPQQETTSMELIQHKDRSNLNEQNNDGSEDLNTMAAFNELTTMPTEVELLLNEPELSHEPQSEDTGISKANTMVVDYSETSGHEIGGEHVELQNQVVEELPLESCIIYSSINDSIPEAAQTVDVISEFQRENQSITPIDLIPIPSTSRQSVELIGGTWVLVDDMPTEVPTKAQNINDFLKLPKTPIKTQKAGTEHRSFVLTSKDWEAVELQKQQKKMKEIQEKENKRIERLEKAKEKQLLKEKKQAETIQKKNKAKDLKLIKKSKPNSDSIKPKIVIQSNVLIKPANRISSDIEKERGYTRELKIEPMSEVKPANITTLKEIKNRPILDAAETENERSFKESEQVMVKKALKKGPILDEPVNFRVSRETRKDKIKVKENRLRPMTNELLKVLEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00702832;
90% Identity
iTF_01538687;
80% Identity
-