Pfes017921.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Plusia festucae
Gene Symbol
-
Assembly
GCA_950381575.1
Location
OX494448.1:3796126-3798807[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-08 8.5e-06 26.1 0.0 1 35 15 49 15 55 0.93

Sequence Information

Coding Sequence
ATGCCGAAGGTTACggatggaaaaaaatatacaaaaacatataCAGAAGAAGATGTAGAAAAAGCCTTGCAAGCCATAAAAAATGGAATGGGTAAGAAAACTGctgcaaataaatttaatatcccACGAGCAACTTTGCAGTTTCGCCTATCCAACCAATTTGTCAAAAGTCGACCTGGTCCAGATACAGTTCTGTCTAGTGCAGAAGAACAAGAGATAGTTAAATGGATAATTGCAGCTTGTAGTAAAGGATTTCCACGGCGTAAAGAGGATGTCATTAAGAGCGTCAAACTGTATTTAGATGAACATCCCAGACCAAacaattttatagataatacaCCAGGCGAGGGATGGTATAAACTGTTTTTGAAGAGGCATCCTGAGCTTTCTATACGAACAGCAGAGGCTGTAACTTCAGCAAGCTCAAAGTTGTCAGAGAAGCAAATTAGAAACTGGTTTACACAAGTAGAAGAATATCTAAAAGAAAATGATCTCTTTCATATTTTGAGTGATCCATCTAGAGTTTATAATGGggatgaaacaaattttattttatgcccaAAGAACACCAAAGTTATCGCTTTAAAAGGAACCAAAAATGTATATGAGGTTGATCACGCTCAGGCTAAATCATGTGTTACTGTAATGTTCACATTTTCGGCGGATGGTGTAACAACACCACCTATGATTATTTACCCCTTAAAGAGAATGCGACCTGAGATTCAAAAGTCTGTGCCTAGCGATTGGGGTATAGGCTTGTCAGATAATGGATGGATGAAGGCCGAGCTCTTCATCCAGTACATACAGAATGTTCTCCATCCAGCGCTGGTGAAGATGAATATCACTTTTccagtaattctttttttggatGGACATAAAAGCCACACAACACTTCAGCTTACTCAACTTTGTCAAAATCTTGGTATAATACTTATAGCTCTATACCCTAACGCGACACGGATTTTACAACCAGCAGACGTAGCGGCCTTTCGCCCAATAAAAGTAATGTGGCGTAAAGCAGTCCTAGAATGGCGAACAGACAACTTAACAAAATCCTTACTAAAAACAGATGTTGCACCTATATTGGAGAAGCTTTTACCCAAATTAAATAAGACGACGTTGAAGAACGGCTTTGAAGCTTGTGGTTTATGCCCATTTAATCCAGATCACGTAGACTACACAAAATGTTTAATGCCCTATAAACCAGTCCAAGAAATTTTGGATGACAACTGTTCTACAAGTCTTAACTATCAGACATTTGAAGAAATAGTTGGAGCACAGTTAATCAGAAAGATGAAAAATCAGGTGGTAGGAAAATCAATAGAAGCTAAAAAGCTTCACGACTTGTATAAATATCTCGTACCAAAAATTTCAACACACGAGTCATCGTCGCAAACAATAGAAACAACTTCTGAGGAACGAATGCAACACAAGGACAGGAGCAATTTAAATGAACAAAACGACGACGTTTCAGAAGATTTGACCACAATGGCAGCCCTCAATGAATTAACGACAATGCCAACAGAAATTGAACGTTTGCCAAATGAACCAGAACTGCCAACTCATGAATCTCAATCCAAAGACACTGGCACTTCTAAAACAAACCCGATGGTTGACAATTATTCAGGAACCTCAGGATCAGGACACGAAAAACTTCTGAATGTTGAACTTCAGCATCAGGGAATTGAGGAATTACCTTTGGCATCCTGTATAAATCTTACATCGACAAACGATTCAGTATCAGAAGCTGTACAAACGGTTGAGGTTATTTCTGAGTGTGAAAGAGAAAAACAAACACCAATATATGTAATACCTATTCCATCCACCAGTCGACAAAGTGTAGAGCTGATTGGAGACAAATGGGTACTAGTGGATGACATGCCAACCGAAGTCCCTTCAAAGAGTccaataaagaaacaaaatataaaagattttttaaagttgCCTAAGACTccaattaaaacacaaaaagctGGTATAGAACATCGCTCTTTTGTTTTAACGAGTAAAGATTGGGAGGCTGTAGAActagaaaaacaacaaaaaaagatgAAAGAGATACAAGAAAAGGAGAACAAACGAATAGCAAGACTAGAAAAAGCCAAAGAGAAACgcttacacaaagaaaaaaaacaagctgaaactattaataaaaagaacaaagccaaaaatttaaatataattaagaaaagtaAACCAAATTCTGATAGTATCAAATCAAAAATTGTTATCcaatcaaacattttaattaaacctgCAAATAGAATCTCAAGTGATATTGAAGAAGAAAGAGGATAtacaaaggaaataaaaaaagaacatatgAACGAAGTTAAACCTGCAAATAGAATCTCAAGTGATATTGAAGAAGAAAGAGAATAtacaaaggaaataaaaaaagaacatataaACGAAGTTAAACCTGCAAATATTATTGCCCTGAAGGACATAAAAAACAGACCAATTTTAGATGCAGTTGAAAGAACCTTTAAAGAATCGGAACAAGTACAGATGgtaaaaaaagaattgaagAAGGGACCAATTTTAGACGAACTTAAACCTCCTAATATAACTTTCCGATATTCAAGGGAAACTGGAAATGATAAGAAGATAAAAGTTAAAGTAAACAGATTGAGACCAATGACAGATGAAGAATTGTTAAAAAGGTTGGAAGATGATTAA
Protein Sequence
MPKVTDGKKYTKTYTEEDVEKALQAIKNGMGKKTAANKFNIPRATLQFRLSNQFVKSRPGPDTVLSSAEEQEIVKWIIAACSKGFPRRKEDVIKSVKLYLDEHPRPNNFIDNTPGEGWYKLFLKRHPELSIRTAEAVTSASSKLSEKQIRNWFTQVEEYLKENDLFHILSDPSRVYNGDETNFILCPKNTKVIALKGTKNVYEVDHAQAKSCVTVMFTFSADGVTTPPMIIYPLKRMRPEIQKSVPSDWGIGLSDNGWMKAELFIQYIQNVLHPALVKMNITFPVILFLDGHKSHTTLQLTQLCQNLGIILIALYPNATRILQPADVAAFRPIKVMWRKAVLEWRTDNLTKSLLKTDVAPILEKLLPKLNKTTLKNGFEACGLCPFNPDHVDYTKCLMPYKPVQEILDDNCSTSLNYQTFEEIVGAQLIRKMKNQVVGKSIEAKKLHDLYKYLVPKISTHESSSQTIETTSEERMQHKDRSNLNEQNDDVSEDLTTMAALNELTTMPTEIERLPNEPELPTHESQSKDTGTSKTNPMVDNYSGTSGSGHEKLLNVELQHQGIEELPLASCINLTSTNDSVSEAVQTVEVISECEREKQTPIYVIPIPSTSRQSVELIGDKWVLVDDMPTEVPSKSPIKKQNIKDFLKLPKTPIKTQKAGIEHRSFVLTSKDWEAVELEKQQKKMKEIQEKENKRIARLEKAKEKRLHKEKKQAETINKKNKAKNLNIIKKSKPNSDSIKSKIVIQSNILIKPANRISSDIEEERGYTKEIKKEHMNEVKPANRISSDIEEEREYTKEIKKEHINEVKPANIIALKDIKNRPILDAVERTFKESEQVQMVKKELKKGPILDELKPPNITFRYSRETGNDKKIKVKVNRLRPMTDEELLKRLEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00702832;
90% Identity
iTF_01221479; iTF_01221480; iTF_01221481; iTF_00700045; iTF_00704922; iTF_01280200; iTF_00825656; iTF_00826889; iTF_00826890; iTF_00702832; iTF_00701905;
80% Identity
-