Eabb010533.2
Basic Information
- Insect
- Eupithecia abbreviata
- Gene Symbol
- -
- Assembly
- GCA_943735975.1
- Location
- CALSER010000079.1:704728-714983[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.011 0.66 10.8 1.5 3 23 204 225 203 225 0.92 2 23 4.4 2.6e+02 2.6 1.1 4 21 593 610 591 611 0.87 3 23 0.098 5.7 7.8 1.4 1 21 619 639 619 640 0.96 4 23 0.00021 0.012 16.2 0.9 3 21 714 732 714 733 0.96 5 23 0.26 15 6.5 0.5 2 23 741 763 740 763 0.93 6 23 0.015 0.89 10.4 0.8 3 23 782 803 780 803 0.92 7 23 0.00036 0.021 15.5 0.5 1 23 808 831 808 831 0.93 8 23 0.067 3.9 8.3 0.0 1 23 857 880 857 880 0.91 9 23 0.016 0.92 10.3 3.4 1 23 885 907 885 907 0.97 10 23 0.012 0.73 10.7 0.2 1 23 913 936 913 936 0.95 11 23 0.0094 0.55 11.0 1.0 1 23 949 971 949 971 0.97 12 23 0.00015 0.0087 16.7 1.8 1 23 1027 1050 1027 1050 0.97 13 23 0.00013 0.0075 16.9 1.4 1 23 1102 1125 1102 1125 0.95 14 23 0.0017 0.1 13.4 1.5 2 23 1150 1172 1149 1172 0.95 15 23 0.017 0.97 10.3 0.1 2 23 1178 1200 1177 1200 0.94 16 23 0.34 20 6.1 0.4 1 21 1240 1260 1240 1261 0.87 17 23 0.001 0.061 14.1 0.6 1 23 1271 1293 1271 1293 0.93 18 23 9e-05 0.0053 17.4 0.4 2 23 1380 1402 1379 1402 0.93 19 23 2.8e-07 1.6e-05 25.3 1.4 3 23 1409 1429 1408 1429 0.98 20 23 0.0051 0.3 11.9 0.2 1 23 1448 1470 1448 1471 0.95 21 23 0.29 17 6.4 0.0 1 23 1494 1516 1494 1516 0.97 22 23 0.023 1.4 9.8 0.6 1 23 1522 1545 1522 1545 0.95 23 23 0.00032 0.019 15.7 0.5 1 23 1553 1576 1553 1576 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCATGTCATTTCGAGGCGAATTACTGCCGATTTTTCCTACCATCAGTTCGGATGAGTTGGAACCTTCCATCCTCGCAACAAAAATCAAGGATTGTGTGTCTGTAGAGATAAACGAAAATGACGAGCTGCCGACGAACATCTGCAGGAAATGCGTGGATAATGTCAACAACTGGCATTTGTTCAAGACTGTATGTGCAAAGACACAAAACAAACTACTGTCTCTCACAAGAAAGGATGGAAGCCTACTAGAAGAGGTGCAAGTAAAAAACGAGCCTTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGAATATACCCTGAAAATGAGCAAGCGGTGGCTTCAAAGCTGCAGCCAGAAGGTCCCCCGATCCTGGCCTCGTTGGGACTTACACCGAGGAGTGATAAGGGAATGGAGAGTGACAAAGACGAAGATGAAGATTATGAAGACGAAGTGAAAATCCCGCAGCCTGTGAAGGTGCCCCACATGCCCGAAGTATCCATTACCGTAATGCGGCCCACGGGAGAAACGCTGCAGTCGCGACAAGGTATCCAACAAATTGCCTCTAAAGACTGTCTCATCTGCGGACGCAGCTATCGGTACTCGCACAACGCGAGGCGACATGAACTCAATACACACAAATTCGACCGCTACACCAACAGAATAAACAAACCGAAATCACATACTCGCATGCAGCCAAAACTCCGACCAAACCCTTTTAACCCGAAAGCGCGTCTCATGCCTAATCCTATTAGCCACAAAATGCAATTACTACCAAAAATGTCCCCGAAATTCATGTCGCAGCACCAGAATCCTCAATTCCATAGGAAAATAATAACACCGCCGAAACCGATACCCATAAAATTTGCAAAGACACCGCAAAACAATTTACCCTATCCGCTTCGTATCAAAGCTCTCAAAGATTTGCAGATAAAGAAAAAAGAACCACAGATTTTAAAAACTTTACTCACCGCCAAGCCTGAGGTGTTGGTCTCGGAACCAGAAATAATGAATTCTGGCCCCGAGAGCCCGGAGACTTTGATCTCTGAACCTGAAATAGCGTCGTTCCAAGTTGAAACTATTCTCTCAGAGCCCAATGATTATGATGAAAATGAAGATGAGGAGGGTGATTCTGAAATGCACAACCATCAAAGTCAAAACTATGACACAGTGGATATGGATTCTGAAAATGAAATAGAGATAGCTCGGCAGCAAGAAAGTCTCGAAGATAACGAAGAAAATCCTAATGAAGAGGAAAATCAGCAAGACGACGACAATAATTTTGATGAGGCTGACAAAGAGGATGAAAATGATAGTGAAAAAGCGAGCCCCCAAGATGTTACTCAAGCTGCAACTGAAGATGACAGTCAAAATATGGTTATTGATGAAAATGATGAAACTAAAGAAGACGAGCCAAACAATGAAGAAGAAGAAGATGAAGAAGATAATGATGAAACTAATAATGACGAATTAGACGCTAGTCAGGCTGAACAAAATGAGGATGATGAAGCAATTCTCGGACTTACTCCTCAAATCGAGTTGAACGAAGAGATGCAAAACAACTCTACAATTAATGAGATGAATGACGAAGAAGAAATGGACGATACCGCTGAGTGCAACGATACTGTCGACGGTGAAGCCGAGGAGCCAGACGCTCCACAAGGCTTTGTCACCAGCACTCAGAGAGACTTCATCAAAAGGTATCGTGATATCATCCTACAGATTAACACCCAGAGATGTCTATGTTGCGACAAAGAATATCCGCGTAGAAAATCCGTGATTCAACATCTGCAGAAAAATGGATATAAAGTCCCAAAGCACACTTGCTATAATTGCGTCGTTACTTTCACTCACATTGGAGCTCTGCTAAGTCACATGAGGCATAACAATTGCACTGATCTCTGGAAGATTATTTACGAGGATAACGGAATCACCAGTGATATGGTCATCGAAGAGCCTAAGAGCAAAATACAAACCAAAGATATTTTCAACGCGAAATCGTATGCGTGTAGATTGTGCACCGCCAAATTTCAACTGAAGCAATCTATCATGAAACATGTTTCTGAGTTCCACGAGGACGGGCAGTCGTCAGTTCCTATGGGCTGTGTCCACTGCGGAGCATCCTTCAAAGATAAAACATTACTCAAGAAACATATTCGGAACGGCGAATGTACTGTGTATATCCATTGCGATTTATGTTCAGAACAATTTACCAATATGCAAGAATTTAACGATCATGCGTTGTCTGCTCATGCTGAGCACTTTGTCAAATCTGAAAACCAGAGTGTCGATGGACGGCTCACAGACTGCTATCTATGTGGAACAAAGACTAGCAGCTATTCAAATTTGCTCAAACATTTCAAAGCGGAACATGATCAAATATTGCATCCTTGCCAATTTTGTGGAGTTAAATTTGAACAACCAGTCGATCTGAACAAACACATGTATTTGGAGCATCCCGGCCAAACTCCCGATTTGAATGCCACCCATCCCGATATGTCCCTTGTCAAAGAAGAGGCTGAAGAATACCACTACTCTTGCACCGAGTGTAATGCAATATTCGAGACTGTAGACGAATGGACTGATCACCAAGTGGCTGAGCATAACCAAGTGGCGCATCATTGCGACCAATGCGAAAAGAAATTCCTGCGACCTTCAGAGCTTGCAGAACACAAGAATACCCACTTGAGAGTTAAATTCTATCCCTGCAGTGTTTGTTCAAACTCTTACAGCACTCCGCAAAAGTTGGCTGATCACGTCCAAAACTCGCATCCTGGTGCCGGGACCAATGTTAGCCCTGATCATGAATTTTTCTGCGAAATGTGTATTCGACCATTCAAAAGTCGCCAGGCCTACTCGAATCATATGCGCATTCATGCTAAAGTACCAACCACTAACAGAAAACCACAAACACCACAGGCACTCAAAGAGTTCGACCCACGAATAATTGGGAAACCCATCAAGCAATTCAACATGTCTAGTTTAGTTCAATCTTCAAACGTCTACAACTTCAAGCCAAACGCAAATGTGCCCAATGCTCCTTATTCTTGTGACATTTGCGGCAAAGGTTTCATGCACAAGAAAAATATTTGGAAACACAAAAAAGTGTTGCATGCCGATATTATTAATGATAGAAACGATAGCGAAGAGAATACAATGCACGCCTCGACCGAAGAAGATGATTACAACGTCGATGAAAACGGCTCTATACTTTCGACGCCGCAATTCAATAGTTTCGCTTTTCCGGTGGAACCTTCGCCGAGCGTTCATGAATGTGAATTATGTGGAAAACAATTCCCTCTGAAGTCTAGTTTGATTAAGCACAAACGTGCAAAGCACGGAATTGTTAATACAAACCATGCCATTAAAACTGAATCACAAGCTTCCCCTAGCGAAGGTGGTGGTCGATCCAGTTGCACCATTTGTAAAATTACATTTGCGGACAAAAAATCTTATTATCGTCACAGAAAGAACGTCCACAAATCAGCTACGCAAATGTGCAAAATATGCGGCAAGCCCCTTAACTCGACGCAGGAGCTGTATGAACATCTAAAAGCGGCCCATGCTAGCTTGTTGCTCGGTTACGACGCCAGCCAAAGTACGAGTAAGAATCAGGATGACATGGATCCTGAGTACGACGAACCAGAAATTGCCAATCCAAACATTGAATATCAAGCGAGGTACCCATGTGATACATGTGGTAAACAATTTTTAGGATTACTGTCTTTGCAAAATCATCAGTGTGTAAGCCAACCTCCATCGCAACCTCAGACTTTCGACTGTGAAATTTGCCACAAAAGCTACACGTCTATCGCTGCGTTAAAGAGCCATCGTGGTTGGCATCTCAGATCCCCCGATGGCAAAGCGGCTGCTAATAATAGCGGTCTTTGGATGCCACAACATAAAGTTACCAGTAAGGTTAGCAAGCACGAAGTATTAGAAGCTGCCCAGCCTACAGGAGGACGATCGCAATCGACACCTTCCGTAGCGAAAAGGAGACTCCCTCCTGAAGTGGAAGTGACCGTTGTGAACCCGAACAAAAAGATGCGCTCTGACGATTCTGTCGAGATGGAACAGCACGGTGACGCAGTGGAAGGCAAGTACTGTACGATATGTGACAAAGAGTTTACGAAACGTGCGGCATATCAACGGCACATGGACGAGGTGCACCAGCCAAACTCCGTGTTTTGTCCAGTCTGTGATAAGAGTTTCACGCGAAAATCGACTCTGCTCGTTCACATGAAGAAGCATTACGAAGGTGGCGGAGAAGGTAGCTCCACGGCTCAAGTTGATGAAGATGAAGGGTTTCCGTGCGAAGTTTGCGGTGCGCAGTATGATACAGAGAACGCTTTACGCGCGCACAAGATAAGACATCATGGTGATGAGGATTCAGGTGATTCGGAGGATGACGGGGAAGTGCCCATGCCGGCGCAGCCCGGCGAGTTTACTTGCGGCCAGTGCGGGGATGGCGTGGCCACGGCGCGCGATCTGATCACGCATCGCGCGATACACTCAACGCACACTAAATTCTTCTGTAATATCTGCAAAGTGTACTTCGCCAGGGCTTTGGATCTGTCATCGCACACGCGAGCGCGGCATGCAGACAATGAGAAAGTATTCTTCCCGTGTGCCATGTGTGATCGCTTCTACATGAACAAGAAAAGTTTACAGCGACACATCGATATGGTTCATTGA
- Protein Sequence
- MTVNYDRVCRLCMSFRGELLPIFPTISSDELEPSILATKIKDCVSVEINENDELPTNICRKCVDNVNNWHLFKTVCAKTQNKLLSLTRKDGSLLEEVQVKNEPSDEAYDDGVVIDGIYPENEQAVASKLQPEGPPILASLGLTPRSDKGMESDKDEDEDYEDEVKIPQPVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRSYRYSHNARRHELNTHKFDRYTNRINKPKSHTRMQPKLRPNPFNPKARLMPNPISHKMQLLPKMSPKFMSQHQNPQFHRKIITPPKPIPIKFAKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDYDENEDEEGDSEMHNHQSQNYDTVDMDSENEIEIARQQESLEDNEENPNEEENQQDDDNNFDEADKEDENDSEKASPQDVTQAATEDDSQNMVIDENDETKEDEPNNEEEEDEEDNDETNNDELDASQAEQNEDDEAILGLTPQIELNEEMQNNSTINEMNDEEEMDDTAECNDTVDGEAEEPDAPQGFVTSTQRDFIKRYRDIILQINTQRCLCCDKEYPRRKSVIQHLQKNGYKVPKHTCYNCVVTFTHIGALLSHMRHNNCTDLWKIIYEDNGITSDMVIEEPKSKIQTKDIFNAKSYACRLCTAKFQLKQSIMKHVSEFHEDGQSSVPMGCVHCGASFKDKTLLKKHIRNGECTVYIHCDLCSEQFTNMQEFNDHALSAHAEHFVKSENQSVDGRLTDCYLCGTKTSSYSNLLKHFKAEHDQILHPCQFCGVKFEQPVDLNKHMYLEHPGQTPDLNATHPDMSLVKEEAEEYHYSCTECNAIFETVDEWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLADHVQNSHPGAGTNVSPDHEFFCEMCIRPFKSRQAYSNHMRIHAKVPTTNRKPQTPQALKEFDPRIIGKPIKQFNMSSLVQSSNVYNFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDDYNVDENGSILSTPQFNSFAFPVEPSPSVHECELCGKQFPLKSSLIKHKRAKHGIVNTNHAIKTESQASPSEGGGRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHASLLLGYDASQSTSKNQDDMDPEYDEPEIANPNIEYQARYPCDTCGKQFLGLLSLQNHQCVSQPPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVLEAAQPTGGRSQSTPSVAKRRLPPEVEVTVVNPNKKMRSDDSVEMEQHGDAVEGKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSTAQVDEDEGFPCEVCGAQYDTENALRAHKIRHHGDEDSGDSEDDGEVPMPAQPGEFTCGQCGDGVATARDLITHRAIHSTHTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01336134; iTF_00702215; iTF_00703242; iTF_00697585; iTF_00706258; iTF_00701290; iTF_01161586; iTF_00699444;
- 90% Identity
- iTF_00702215; iTF_00701290; iTF_00703242; iTF_00697585; iTF_00706258; iTF_00699444;
- 80% Identity
- -