Eint005834.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759181.1:4978383-4982678[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.011 0.78 10.9 1.5 3 23 54 75 53 75 0.92 2 24 4.2 3.1e+02 2.8 1.1 4 21 445 462 443 463 0.87 3 24 0.093 6.8 8.0 1.4 1 21 471 491 471 492 0.96 4 24 5.6 4.1e+02 2.4 0.4 1 23 532 555 532 555 0.90 5 24 0.0002 0.015 16.4 0.9 3 21 566 584 566 585 0.96 6 24 0.25 18 6.6 0.5 2 23 593 615 592 615 0.93 7 24 0.014 1.1 10.5 0.8 3 23 634 655 632 655 0.92 8 24 0.00034 0.025 15.6 0.5 1 23 660 683 660 683 0.93 9 24 0.064 4.7 8.5 0.0 1 23 709 732 709 732 0.91 10 24 0.015 1.1 10.5 3.4 1 23 737 759 737 759 0.97 11 24 0.012 0.87 10.8 0.2 1 23 765 788 765 788 0.95 12 24 0.0089 0.66 11.2 1.0 1 23 801 823 801 823 0.97 13 24 0.00014 0.01 16.8 1.8 1 23 879 902 879 902 0.97 14 24 0.00012 0.0089 17.1 1.4 1 23 954 977 954 977 0.95 15 24 0.0016 0.12 13.5 1.5 2 23 1002 1024 1001 1024 0.95 16 24 0.016 1.2 10.4 0.1 2 23 1030 1052 1029 1052 0.94 17 24 0.32 24 6.3 0.4 1 21 1095 1115 1095 1116 0.87 18 24 0.00098 0.072 14.2 0.6 1 23 1126 1148 1126 1148 0.93 19 24 8.6e-05 0.0063 17.5 0.4 2 23 1235 1257 1234 1257 0.93 20 24 2.6e-07 1.9e-05 25.4 1.4 3 23 1264 1284 1263 1284 0.98 21 24 0.0083 0.61 11.3 0.8 1 23 1303 1325 1303 1326 0.95 22 24 0.27 20 6.5 0.0 1 23 1349 1371 1349 1371 0.97 23 24 0.022 1.6 10.0 0.6 1 23 1377 1400 1377 1400 0.95 24 24 0.0003 0.022 15.8 0.5 1 23 1408 1431 1408 1431 0.96
Sequence Information
- Coding Sequence
- ATGGAGAGTGAGAAAGACGAAGATGAAGATTATGAAGATGTAAAAATCCCGCAGCCTGTGAAGGTGCCACACATGCCTGAAGTATCCATCACCGTAATGCGGCCCACGGGCGAAACTCTGCAGTCGCGACAAGGTATCCAACAAATTGCATCTAAAGACTGCCTCATCTGCGGCCGCAGCTACCGGTACTCGCACAACGCGAGGCGACATGAACTTAACACACACAAATTCGACCGCTACACCAACCGAATAAACAAACCGAAGTCGCATACTCGCATGCAACCAAAACTCCGACCAAACCCTTTTAACCCGAAAGCGCGTCTCATGCCTAATCCTATCAGCCATAAAATGCAGTTAGTACCAAAAATGTCCCCGAAATTCATGCAGCAGCAGCAGAGTCCTCAATtccatagaaaaataataacaccaCCGAAACCGATACCCATAAAATCTGCAAAGACACCGCAAAACAATTTACCCTACCCGTTGCGTATCAAAGCTCTCAAAGATTTGCAGATAAAGAAGAAAGaaccacagattttaaaaactttgctCACCGCCAAGCCTGAGGTTTTGGTCTCGGAACCAGAAATAATGAATTCTGGCCCCGAGAGCCCGGAGACTTTGATCTCTGAACCTGAAATAGCGTCGTTCCAAGTTGAAACTATTCTCTCAGAGCCCAATGATTATGATGATCATCAAGACGAAGATGATGGAGATTCTGAAATGCCCAACCATCAGAACCAAAATTATGACACTGTTGATATGGATTCTGAAAATGAAATAGAAATAGCTCGACAACAAGAAAGTATGGAAGATAACGAAGAAAATCCGAATGAAGATGAAAACGTTCAGCAAGACGACGACAATAATTTTGACGAAGCGGACAAAGAGGATGAAAATGATAGTGAAAAAGCGAGCCCCCAGAATGTAACTCAAGTTGCAACTGAAGATGACAGTGAAAATATGGTTATCGATGAAAATAGTGAAACTAAAGAAGATGAACCAAACAATGAAGAAGAAGATGAAGAAGGCAACGATGAAGGTGATAATGATGAATTAGACGCCAGTCAGGCTGAACGAAACGAGGATGATGAGGAAATTCTCGGACTTACGCCTCAAATCGAGTTGAACGAAGAAATGCAAAACAACTCAACAATCAACAGTGAGATGAATGACGAAGAAGAGCCGGACGAAACCGCTGATTTCAACGACACTGTCGACGGCGAAGCTGAGGAGCCAAACGCTCCGCAAGGCTTCGTCACCAGCACTCAGAGAGACTTTATCAAAAGATATCGTGATATCATCCTACAGATTAACACCCAGAGATGCCTGTGCTGTGACAAAGAATATCCGCGCAGAAAATCCGTGATTCAACATCTCCAAAAAAATGGATATAAAGTTCCAAAGCACACTTGCTATAATTGTGTCGTTACTTTCACGCACATTGGAGCCCTGCTAAGTCACATGAGGCATAACAATTGCACTGATCTCTGGAAGATTATTTACGATGATAACGGAATCATCAGCGAAATGATAATTGAAGAGCCGAAGAGCAAAATACAAACCAAAGATATTTTCAACGCGAAATCGTATGCGTGTAGATTGTGCCCCGCCAAATTTCAACTAAAACAATCTATCATGAAACACGTTTCTGAGTTCCACGAGGACGGCCAGTcgtcagttcctatgggatgcGTCCACTGCGGAGCATCCTTCAAAGATAAAACTTTACTCAAGAAACACATTCGCAATGGCGAATGTACTGTGTATATCCATTGCGATTTATGTTCAGAACAATTTACCAATATGCAAGAATTTAATGATCATGCTTTGTCTGCTCATGCAGAGCACTTTGTCAAATCTGAAAACCAGAGTGTCGATGGACGACTTACAGACTGCTATCTATGTGGAACGAAGACTAGCAGCTATTCGAACTTGCTCAAACATTTCAAAGCGGAACATGATCAGATATCGCACCCTTGCCAATTTTGTGGAGTTAAATTTGAACAACCAGTCGATTTGAATAAACACATGTATCTGGAGCATCCTGGGCAAACTCCCGATTTGAGCGCCACCCATCCTGACATGTCCCTTGTAAAGGAAGAAGCTGAAGAATACCACTACTCTTGCACCGAGTGTAATGCAATATTCGAGACTGTAGACGAATGGACTGACCACCAAGTGGCTGAGCATAACCAAGTGGCACATCATTGCGACCAATGCGAAAAGAAATTCCTGCGGCCTTCAGAGCTTGCAGAGCACAAGAATACCCACTTGAGAGTTAAATTCTATCCTTGCAGTGTTTGTTCAAACTCTTACAGCACTCCGCAAAAGTTGGCTGATCACGTTCAAAACTCACATCCTGGTGCCGGGACCAATGTCAGCCCTGATCATGAATTTTTCTGCGAAATGTGTATTCGACCATTTAAAAGTCGCCAGGCCTACTCGAATCATATGCGCATTCATGCTAAAGTACCAACCACTAACAGAAAACCACACACACCACAGGCACTCAAAGAGTTCGACCCACGTATAATTGGGAAACCCATCAAGCAGATCACTTTGTCAAATGTAGTTCAACCTTCAACCGTCTTCAACTTTAGGCCAAACGCAAATGTCCCTAATGCTCCTTATTCTTGTGACATTTGTGGCAAAGGTTTCATGCACAAGAAAAATATTTGGAAACACAAAAAAGTTTTGCATGCCGATATTATTAATGATAGAAACGATAGCGAAGAGAATACGATGCACGCCTCCACCGAAGAAGACGATTACAATGTCGATGAAAACGGCTCTATACTTTCAACGCCGCAATTCAATAGTTTCGCCTTTCCGGTGGAACCGTCGCCGACCGTTCACGAATGTGAATTATGTGGAAAACAATTCCCTCTGAAGTCTAGTTTGATTAAGCACAAGCGTGCCAAGCACGGAATTGTTAACACAAACCATGCTATTAAAACTGAATCACAAGCTTCCCCCAGTGAAGGTGGTGGTCGGTCCAGTTGCACTATTTGTAAAATTACATTTGCGGACAAGAAATCTTATTACCGCCACAGAAAGAACGTCCACAAATCAGCTACGCAAATGTGCAAGATATGTGGTAAGCCGCTTAATTCGACGCAGGAGCTGTATGAACATCTAAAAGCGGCCCACGCCAGCTTGTTGCTAGGATACGACGCCAACCAGAGTACGAGTAAGACTCAGGATAATTCACAAGACATGGATCTCGAGTACGACGAACCAGAAATTGGCAATCCAAATATTGAATACCAAGCGAGGTACCCATGTGATACATGTGGTAAACAATTTTTAGGTTTATTGTCTTTGCAAAATCATCAGTGTGTAAGTCAGCCTCAATCACAACCTCAGACTTTCGACTGTGAAATTTGCCACAAAAGTTACACGTCGATCGCTGCGTTAAAGAGCCATCGCGGTTGGCATCTCCGATCCCCCGATGGCAAAGCGGCTGCTAACAATAGCGGTCTTTGGATGCCGCAGCATAAAGTTACCAGTAAGGTTAGCAAGCACGAAGTTTTAGAAGCAGCCCAATCTGCAACAGGACGGTCGCAATCGACAGCTTCCGTAGCGAAAAGGAGACTACCTCCCGAAGTGGAAGTGACCGTTGTGAACCCCAACAAAAAGATGCGCTCTGACGATTCTGTCGAGATGGAACAGCACGGTGACGCTGTGGAAGGCAAGTACTGTACGATTTGTGACAAAGAGTTTACGAAACGCGCCGCATATCAACGGCACATGGACGAAGTGCACCAGCCGAACTCTGTGTTTTGTCCAGTATGCGATAAGAGCTTCACGCGAAAATCGACTCTGCTCGTTCACATGAAGAAGCATTACGAAGGTGGCGGAGAAGGTAGCTCCACAGCTCAAGTCGATGAAGATGACGGTTTTCCGTGCGAAATCTGCGGTGCGCAGTGTGATACTGAGAACGCTTTACGGGCGCACAAGATAAGACATCACGCTGATGAAGAATCAGGTGATTCGGAGGATGACGGGGAAGTGCCGATGGCGGCGCAGCCCGGCGAGTTTACTTGCGGCCAGTGCGGGGATGGCGTAGCCACGGCGCGCGATCTGATCACACATCGCGCGATACACTCAACGCATACCAAATTCTTCTGTAACATCTGCAAAGTGTACTTCGCCAGGGCATTGGATCTGTCGTCGCACACGCGAGCGCGGCATGCAGACAATGAGAAAGTGTTCTTCCCGTGTGCCATGTGTGATCGCTTCTACATGAACAAGAAAAGTTTACAGCGACACATCGACATGGTTCAttga
- Protein Sequence
- MESEKDEDEDYEDVKIPQPVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRSYRYSHNARRHELNTHKFDRYTNRINKPKSHTRMQPKLRPNPFNPKARLMPNPISHKMQLVPKMSPKFMQQQQSPQFHRKIITPPKPIPIKSAKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDYDDHQDEDDGDSEMPNHQNQNYDTVDMDSENEIEIARQQESMEDNEENPNEDENVQQDDDNNFDEADKEDENDSEKASPQNVTQVATEDDSENMVIDENSETKEDEPNNEEEDEEGNDEGDNDELDASQAERNEDDEEILGLTPQIELNEEMQNNSTINSEMNDEEEPDETADFNDTVDGEAEEPNAPQGFVTSTQRDFIKRYRDIILQINTQRCLCCDKEYPRRKSVIQHLQKNGYKVPKHTCYNCVVTFTHIGALLSHMRHNNCTDLWKIIYDDNGIISEMIIEEPKSKIQTKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSSVPMGCVHCGASFKDKTLLKKHIRNGECTVYIHCDLCSEQFTNMQEFNDHALSAHAEHFVKSENQSVDGRLTDCYLCGTKTSSYSNLLKHFKAEHDQISHPCQFCGVKFEQPVDLNKHMYLEHPGQTPDLSATHPDMSLVKEEAEEYHYSCTECNAIFETVDEWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLADHVQNSHPGAGTNVSPDHEFFCEMCIRPFKSRQAYSNHMRIHAKVPTTNRKPHTPQALKEFDPRIIGKPIKQITLSNVVQPSTVFNFRPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDDYNVDENGSILSTPQFNSFAFPVEPSPTVHECELCGKQFPLKSSLIKHKRAKHGIVNTNHAIKTESQASPSEGGGRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHASLLLGYDANQSTSKTQDNSQDMDLEYDEPEIGNPNIEYQARYPCDTCGKQFLGLLSLQNHQCVSQPQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVLEAAQSATGRSQSTASVAKRRLPPEVEVTVVNPNKKMRSDDSVEMEQHGDAVEGKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSTAQVDEDDGFPCEICGAQCDTENALRAHKIRHHADEESGDSEDDGEVPMAAQPGEFTCGQCGDGVATARDLITHRAIHSTHTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00696657;
- 90% Identity
- iTF_00696657;
- 80% Identity
- -