Epul009098.1
Basic Information
- Insect
- Eupithecia pulchellata
- Gene Symbol
- -
- Assembly
- GCA_963931895.1
- Location
- OZ007527.1:10307167-10316746[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.012 0.85 10.8 1.5 3 23 204 225 203 225 0.92 2 24 4.7 3.3e+02 2.6 1.1 4 21 594 611 592 612 0.87 3 24 0.1 7.4 7.8 1.4 1 21 620 640 620 641 0.96 4 24 6.3 4.5e+02 2.2 0.4 1 23 681 704 681 704 0.90 5 24 0.00022 0.016 16.2 0.9 3 21 715 733 715 734 0.96 6 24 0.28 20 6.5 0.5 2 23 742 764 741 764 0.93 7 24 0.016 1.2 10.4 0.8 3 23 783 804 781 804 0.92 8 24 0.00038 0.027 15.5 0.5 1 23 809 832 809 832 0.93 9 24 0.071 5.1 8.3 0.0 1 23 856 879 856 879 0.91 10 24 0.017 1.2 10.3 3.4 1 23 884 906 884 906 0.97 11 24 0.013 0.94 10.7 0.2 1 23 912 935 912 935 0.95 12 24 0.01 0.71 11.0 1.0 1 23 948 970 948 970 0.97 13 24 0.00016 0.011 16.7 1.8 1 23 1026 1049 1026 1049 0.97 14 24 0.00014 0.0097 16.9 1.4 1 23 1101 1124 1101 1124 0.95 15 24 0.0018 0.13 13.4 1.5 2 23 1149 1171 1148 1171 0.95 16 24 0.018 1.3 10.3 0.1 2 23 1177 1199 1176 1199 0.94 17 24 0.36 26 6.1 0.4 1 21 1240 1260 1240 1261 0.87 18 24 0.0011 0.078 14.1 0.6 1 23 1271 1293 1271 1293 0.93 19 24 9.7e-05 0.0069 17.4 0.4 2 23 1378 1400 1377 1400 0.93 20 24 3e-07 2.1e-05 25.3 1.4 3 23 1407 1427 1406 1427 0.98 21 24 0.003 0.21 12.7 0.4 1 23 1446 1468 1446 1469 0.95 22 24 0.31 22 6.4 0.0 1 23 1493 1515 1493 1515 0.97 23 24 0.025 1.7 9.8 0.6 1 23 1521 1544 1521 1544 0.95 24 24 0.00034 0.024 15.7 0.5 1 23 1552 1575 1552 1575 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCATGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGAGTTGGAACCTTCCATCCTCGCATCAAAAATCAAGGATTGTGTGTCAGTACAGATAAACGAAAATGACGAGCTGCCGACGAACATCTGCAGGAAATGCGTGGATAATGTCAACAACTGGCATTTATTCAAGACTGTGTGTGCAAAGACACAAAATAAACTACTGTCTCTCACAAGAAAGGATGGAAGCCTACTAGAAGAGGTGAATGTAAAAAATGAGCCTTTTTCTGATGAAGCCTATGATGATGGAGTGGTTATTGATGGATCATATCCTGAACATGAGCAAGCGGTGGCTTCAAAGCTGCAGCCTGAAGGTCCCCCAATCCTGGCCTCATTGGGACTTACACCGAGGAGTGATAAGGGAATGGAAAGTGAGAAAGACGAAGATGAAGATTTTGAAGATGTAAAAATCCCGCAACCTGTGAAGGTGCCACACATGCCTGAAGTTTCCATCACCGTGATGCGACCAACTGGAGAGACGCTGCAGTCACGACAAGGTATCCAACAGATTGCCTCTAAAGACTGCCTCATCTGCGGCCGCAGCTATCGGTACTCGCACAACGCGAGGCGACATGAACTCAACACACACCAATTCGACCGCTAcaccaacaaaataaacaaaccgaAATCACATACTCGCATGCAACCAAAACTCCGACCAAACCCCTTTAATCCGAAGGCGCGTCTCATGCCTAATCCTATTAGCCACAAAATGCAATTAATGCCAAAAATGTCTCAGAAATTCATGTCGCAGCAGCAGAATCCTCAATTCCATAGGAAAATAATAACTCCACCGAAACCGATACCAATAAAATCTGCAAAGACACCACAAAACAATTTACCATATCCGTTGCGTATCAAAGCTCTCAAGGATTTGcagataaagaaaaaagaaccaCAGATTTTAAAAACTTTGCTCACCTCTAAGCCTGAAGTTTTGGTTTCGGAACCAGAAATAATGAATTCTGGCCCTGAGAGCCCGGAGACTTTGATCTCTGAACCTGAAATAGCGTCGTTCCAAGTTGAAACTATTCTCTCAGAGCCCAATGATTATGATGAAAATCAAGATGAAGAAGAGGGGGATGCTGAAATGCAGAACCATCAGAGTCATAATTATGATACAGTTGATATGGATTCTGAAAACGAAATAGAAATAGCTCGACAACAAGAGAGTGTGGATGATAACGAAGATAATCCAAATGAAGATGAAAATGCTCAGCAAGACGAAGACAATAATTTTGACGAAGCTGACAAAGAAGAAGATAATGATAGTGAAAAAGCGAGTCCTGAAGAGATAACTCAAGCTGGCGAAGATGACACTGAAAATATGGTGATAGATGAAACCGATGAAAATAAAGAAGACGAGGCAAACAATGAAGAAGAAGATGAAGAAGGCAACGATGatgctgataatgatgaattaGACGCTAGTCAGGCTGAACGAAACGAGGATGATGAGGAAATTCTCGGACTTACTCCTCAAATCGAGTTGAACGACGAAATGCAAAACAACTCTACGGTCAACAGTGAAATGAACGACGATGAAGAACAAGATGAAACCGCTGAGTTCAACGACACTGTCGACGGCGAAACTGAAGATCCAAACGCTTCGCAAGGCTTTATCACGAGTACTCAGAGAGATTTCATCAAAAGATATCGTGATATCATCCTACAGATTAATACCCAGAGATGCCTGTGTTGCGACAAAGAATATCCGCGCCGAAAATCTGTCATTCAACATCTGCAGAAAAATGGATATAAAGTCCCAAAGCACACTTGCTATAATTGTGTCGTCACTTTCACCCACATTGGGGCTCTGCTAAGTCACATGAGGCACAATAATTGCACTGATCTCTGGAAGATTATTTACGATGATAACGGAATCACCAGCGAAATGATAATTGAAGAGCCTAAGAGTAAAATACAAACCAAAGATATTTTCAACGCGAAATCGTATGCGTGTAGATTGTGCCCCGCCAAATTTCAACTAAAACAATCTATCATGAAACATGTTTCTGAGTTCCACGAGGACGGCCAGTCGTCAGTTCCTATGGGCTGCGTACACTGCGGAGCATCCTTCAAAGACAAAACACTACTCAAGAAACACATTCGCAATGGCGAATGCACTGTGTATATTCATTGCGATTTATGTTCCGAACAATTTACCAATATGCAAGAATTTAACGATCATGCTTTATCTGCTCACGCTGAGCACTTTGTCAAATCTGAGAACCAGAGTGTCGATGGACGACTCACAGACTGCTATCTATGCGGAACAAAGACTAGCAGCTATTCGAACTTGCTCAAACATTTCAAAGCAGAACATGATCAGATATCGCACCCTTGCCAATTTTGTGGAGTTAAATTCGAACAACCAGTTGATCTGAACAAACACATGTATCTGGAGCATCCTGGGCAAACTCCTGATTTGAACGCTCCTGACATGTCCCTTGTCAAAGAAGAAGCTGAAGAATACCACTACTCTTGCACCGAGTGTAATGCCATATTCGAGACTGTAGACGAATGGACTGATCACCAAGTCGCTGAACATAACCAAGTCGCGCATCACTGCGACCAATGCGAAAAGAAATTCCTGCGACCATCAGAGCTCGCAGAGCACAAGAATACGCACTTGAGAGTTAAATTCTATCCTTGCAGTGTTTGTTCAAATTCTTACAGCACTCCGCAAAAGTTGGCTGATCACGTTCAAAACTCGCATCCCGGTGCCGGGACCAATGTTAACCCTGATCATGAATTTTTCTGCGAAATGTGTATTCGACCATTCAAAAGTCGCCAAGCGTACTCGAATCATATGCGCATTCATGCTAAAGTTCCAACCACTAACCGAAAACCACAGACGCCACAGGGTCTCAAAGAGTTCGACCCACGTATAATTGGGAAACCCATCAAGCAGTTCACTATGTCTAATGTAGTACAATCTTCAAACGTCTTTAACTTCAAGCCAAACGCAAATGTGCCTAATGCTCCTTATTCTTGTGACATTTGTGGCAAAGGTTTTATGCACAAGAAAAATATTTGGAAGCACAAAAAAGTGCTGCATGCCGATATTATTAATGATAGAAACGATAGCGAAGAGAATACGATGCACGCCTCCACCGAAGAAGACGATTACAACGTCGATGAAAACGGCTCTATTCTTTCGACGCCGCAATTCAATAGTTTCGCTTTTCCCGTGGAACCATCGCCGAGCGTTCACGAATGTGAATTATGTGGTAAACAGTTCCCTCTGAAGTCTAGCTTGATTAAGCACAAACGTGCCAAGCACGGAATTGTTAATACAAACCACGCTATTAAAACTGAATCACAAGCCTCCCCTAGTGAAGGCGGTGGACGATCCAGTTGCACTATTTGTAAAATTACATTTGCGGACAAGAAATCTTATTATCGCCACAGAAAGAACGTCCACAAATCAGCTACCCAAATGTGCAAGATATGTGGTAAGCCCCTTAACTCGACGCAGGAGTTGTATGAACATCTGAAGGCAGCCCACGCCAGCTTGTTGCTCGGTTACGACGCGAGCACGAGTAAGACACAGGATATTTCACAAGACATGGATCCCGATTACGACGAACCAgaaattaccaataaaaatattgaataccaAGCGAGGTACCCATGTGATACTTGTGGTAAGCAATTTTTAGGATTACTGTCTTTGCAAAATCATCAGTGTGTAATTCAGCCTCCGTCGCAACCTCAGACTTTCGACTGTGAAATTTGCCACAAAAGCTACACGTCGATTGCTGCGTTGAAGAGCCATCGTGGTTGGCATCTCCGGTCCCCCGATGGCAAAGCGGCCGCAAACAATAGCGGTCTTTGGATGCCGCAACATAAAGTTACCAGTAAAGTTAGCAAACACGAAGTTTTAGAAGCTGCCCCGCCAACACGATCGCAATCGACAGCTTCTGTCGCGAAAAGGAGACTTCCTCCCGAAGTGGAAGTGACCGTTGTGAACCCCAACAAAAAGATGCGCTCTGACGATTCCGTCGAgatggaacagcacggcgacGCCGTTGAGGGCAAGTACTGTACGATATGCGACAAAGAGTTCACGAAACGCGCCGCATACCAACGGCACATGGACGAAGTGCACCAACCGAATTCCGTGTTTTGTCCAGTCTGCGATAAAAGCTTCACGCGAAAATCGACTCTGCTCGTTCACATGAAGAAGCATTACGAAGGTGGTGGAGAAGGTAGTTCCACAGCACAAGTGGATGAAGATGAGGGATTTTCGTGCGACATCTGCGGTGCGCAGTATGAAACTGAGAATGCTTTACGGGCGCACAAGATAAGGCATCACGGGGATGAGGAGGAGTCGGGTGATTCGGAGGATGATGGTGAAGTGCCGATGGCGGCTCAGCCCGGCGAGTTCACTTGCGGACAGTGCGGCGACGGCGTGGCCACGGCGCGCGATCTCATCACACATCGCGCTATACACTCAACGCACACTAAATTCTTCTGTAATATCTGCAAAGTGTACTTCGCCAGGGCATTGGATCTGTCGTCGCACACGCGAGCGCGGCACGCTGACAATGAGAAAGTGTTCTTCCCGTGTGCCATGTGTGATCGCTTCTATATGAACAAGAAAAGTTTACAGCGACACATCGATATGGTTCATTGA
- Protein Sequence
- MTVNYDRVCRLCMSSRGELLPIFPTTSSDELEPSILASKIKDCVSVQINENDELPTNICRKCVDNVNNWHLFKTVCAKTQNKLLSLTRKDGSLLEEVNVKNEPFSDEAYDDGVVIDGSYPEHEQAVASKLQPEGPPILASLGLTPRSDKGMESEKDEDEDFEDVKIPQPVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRSYRYSHNARRHELNTHQFDRYTNKINKPKSHTRMQPKLRPNPFNPKARLMPNPISHKMQLMPKMSQKFMSQQQNPQFHRKIITPPKPIPIKSAKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDYDENQDEEEGDAEMQNHQSHNYDTVDMDSENEIEIARQQESVDDNEDNPNEDENAQQDEDNNFDEADKEEDNDSEKASPEEITQAGEDDTENMVIDETDENKEDEANNEEEDEEGNDDADNDELDASQAERNEDDEEILGLTPQIELNDEMQNNSTVNSEMNDDEEQDETAEFNDTVDGETEDPNASQGFITSTQRDFIKRYRDIILQINTQRCLCCDKEYPRRKSVIQHLQKNGYKVPKHTCYNCVVTFTHIGALLSHMRHNNCTDLWKIIYDDNGITSEMIIEEPKSKIQTKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSSVPMGCVHCGASFKDKTLLKKHIRNGECTVYIHCDLCSEQFTNMQEFNDHALSAHAEHFVKSENQSVDGRLTDCYLCGTKTSSYSNLLKHFKAEHDQISHPCQFCGVKFEQPVDLNKHMYLEHPGQTPDLNAPDMSLVKEEAEEYHYSCTECNAIFETVDEWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLADHVQNSHPGAGTNVNPDHEFFCEMCIRPFKSRQAYSNHMRIHAKVPTTNRKPQTPQGLKEFDPRIIGKPIKQFTMSNVVQSSNVFNFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDDYNVDENGSILSTPQFNSFAFPVEPSPSVHECELCGKQFPLKSSLIKHKRAKHGIVNTNHAIKTESQASPSEGGGRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHASLLLGYDASTSKTQDISQDMDPDYDEPEITNKNIEYQARYPCDTCGKQFLGLLSLQNHQCVIQPPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVLEAAPPTRSQSTASVAKRRLPPEVEVTVVNPNKKMRSDDSVEMEQHGDAVEGKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSTAQVDEDEGFSCDICGAQYETENALRAHKIRHHGDEEESGDSEDDGEVPMAAQPGEFTCGQCGDGVATARDLITHRAIHSTHTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00696657;
- 90% Identity
- iTF_00696657;
- 80% Identity
- -