Eann012296.1
Basic Information
- Insect
- Eupelmus annulatus
- Gene Symbol
- -
- Assembly
- GCA_900480025.1
- Location
- UDEW01001054.1:16820-21880[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.8e+02 3.3 4.4 1 23 364 386 364 386 0.97 2 19 0.00026 0.023 15.6 1.0 1 23 435 457 435 457 0.98 3 19 0.029 2.6 9.1 0.4 1 20 511 530 511 532 0.94 4 19 0.023 2 9.4 0.9 2 23 573 594 572 594 0.97 5 19 0.00016 0.014 16.2 0.2 1 23 637 659 637 659 0.97 6 19 0.00041 0.036 14.9 0.1 1 23 665 687 665 687 0.98 7 19 0.00014 0.012 16.4 2.5 3 23 731 752 730 752 0.94 8 19 0.00056 0.049 14.5 0.3 2 23 760 782 759 782 0.96 9 19 0.0003 0.026 15.4 0.8 2 19 811 828 810 833 0.89 10 19 0.00012 0.011 16.6 1.2 1 23 864 886 864 886 0.93 11 19 0.33 29 5.8 0.2 2 20 949 967 948 967 0.95 12 19 0.0054 0.48 11.4 0.1 2 23 986 1007 985 1007 0.97 13 19 0.011 0.99 10.4 4.3 1 23 1039 1061 1039 1061 0.97 14 19 0.08 7.1 7.7 5.2 1 21 1080 1100 1080 1104 0.88 15 19 0.046 4 8.5 0.6 2 23 1162 1184 1161 1184 0.93 16 19 0.016 1.4 9.9 2.9 3 23 1213 1234 1211 1234 0.89 17 19 0.0014 0.12 13.2 0.1 1 23 1241 1265 1241 1265 0.96 18 19 0.0039 0.34 11.8 1.5 1 23 1270 1293 1270 1293 0.97 19 19 0.0091 0.81 10.7 0.4 3 23 1325 1346 1323 1346 0.95
Sequence Information
- Coding Sequence
- ATGAACGAGGAGGCCAGCAACAGCCTCGACGAGGTGGTCGAGCTCAGCCAGGGCCTGGAGAACGCGTGCAGGCTCTGCCTCACCACCGAGCAAACGAGGTCCTCGATCTTCGGCGTGCCCCACGTCTCGGTGCCCTTCGCCGAGAAGATACGAGTTTGTTTGGCTATTCAGATCACATCTAACGACAAGCTGCCAACGCTAGTGTGTACAACATGTATCCAAAACATAAACCATTGGCACTCGTACAAAGATGTAGTTTCAAAATCACAAGAGAAACTTCAACAATGGTTATCAAAGCAGAATACCATTCaacCAATGGTAACTGTAAAAGAAGAACCAGTAGATGTAGAATTTCGAGATGAAAATGCTCAAACTGCAGCGAATGAATCTaatatgACAAATCACGTTGCATCTGGTCCTGAAAATgtggaaattgaaaatgaaagcaCGACTCCAGCCGTCACTGAGATAGCTAAAGCAGCTACTGTAGaaacaactaaaaaatcaCCAGAgcaatcatcaaaatttaacgaaaGGATTGATAAAGAGTACCCACTAGaggttcaaataaaaactgaacCTGTAGATACAGAAGATGAAGATGATTGTAATATAGATGTTGAATCTGTGAACAGTGgagaacttttaattaatcctATGGCAGTAGCAGTAGCAAGCAATGCTAATAATGATAGGGTAATGGAAGCTGATTCAACCCAAAAACTCACAAGAAAATATGTTGCAAGGAAAAAAATGCGCCGTGGACCTCACACACACTTTAGAGGGGcacgattatttaaaaaaaaatgtattcattgtaaaataaatttgcactCAAAACACTCATACACGCAGCATATGTCGAGATACCATGGCATTAACAATTTACCATCAAATAATGGTGCCAAACTGCAAGGACAGTTTACTTCaggtaaacaaaaatcaaaacttctGCAACATCCAGATAATTTGGATCCTAATGCAGACACtcaaagtaaaagtaatcCAGATGAAGTAGAATTTGAACAGATGATAAAGACAGATCCACTAACACCAgttcaaagaaatattatcgGCCAATTAAAGACTTTTTCTTGCTACTCTTGTCAATCTGTCTTTTTTGATCGGAGGCATACTTTGAATCATATAAGGCAGCATATGCCTGATCTACGCATCTACACTTGCATTGCTTGTCTTACTGAGTTTGCTGACAGGTCTATGTATAAACTTCATTGCGGCGCGTCATTTGAATGTGCTATGAAAATTGCTCTCGTGATTCCAAAAGTtggcaatgaaaaatattttacctgcAATATGTGTCTTCGCTCATTTAATAACCGACGGGAACTTCTGTCCCACTTGGCCTCGCACATTGGCAAAGAGGATCGACAAATGACTCAACCTTCAAGAGCACCGGTAAAGCTCAAGTCCATTTTACCATCACCAGCTTCTAAGAATGACTTAACCCCTTCCAAAAGATCCCCTTCAGGCATTCGTGGACCGTACATGCACGGGGATCCAGCCCACAACCACATGTGCGACCTGTGTGGAATGATCTATAGGTATAAGCCTAATATGTTCAAGCATCGCGATCTTTGCTCTACCTTGCCAGAGAATATCCGCACTTCCTATAGATGCGTCCATTGTAATATGACTTACCTCGTGTACAAGAAGTTTTATATCCACGTGCTGAAAGAACACAAGAAAAAGGAAATCACTTGTTTCACGTGTAGTGCAAAATTCCCAACCCCGGACGATTATCTCACCCATCACGAGACTCACCGAGTCATCAGCGGTAAGGAGAATACGAACGAGCCAGCAAATGAAAAGCAGCAGGGCAACGACTACTCGATGATGGTGGACCCGCTGAACGATTCCCATCACCCGATGGACGTAAGCGAGAAGCCATTCAATTGCGCGCTTTGTGGCGAAGATTTCACCTCTAAGGCCGAACTCACCGAGCATCGCAACCTCCACCTcaaggtaaaaatatattcatgcGTGATATGTCGCAGTATGTTCAGTAGTTCGGGAGCTCTGGAGATACACATGAAGGAACATGGTATAGACGATGCCAATGAACAAGGCGCCAATAGCTCATGCGTCGAATACGGGCGGGGTAATCGCTCGCAAAATTCACTGAACATGTCCATGTCGGCTACGTCTGATCCAGGTGGGCATTTCAATCATTGCTATCTGTGTGGCAAGAATTTCTCGAATCTCGCGAATTTGAAACGTcatgagaaaaatttacacaTAGGGCAGAAACGCCGTTGGAGCTGCGATGAATGTAAGCGACGCTTTAAATCACTTGAAGCTTATGAAGAACACGTAAAAACGGAACACGGACCCCAGCCGCTACCGTCAAATCCTGAGAAGAAAGTAACGCCTGCACCTCCACTGCAGTCGAATAGTGGCAAGCCACTGATGCAGTGCCCTAAATGTCCCAAGACCTTTGCCTACCAGGGCAATCTCATCCTCCACTGTCAGAACGTTCACAAGGAGAATCACTTCGAGCGCATCGTAGCTTCTGCTCGTCTACCTCATGCCGCCCCAGTGCGTAGGGCCATAATTGGTGTCCGTGGTGGTCACTCATGCGATGTCTGCGGAAAAACCTTCCGTATGGCGCAATCACTCAAGACGCATCGCGGTTGGCATTTACGTACCAACTACCGGCTCAAAAAGGACGTCAAGGATACTACCGCAAGTTTGAACGACTCGACGCTGAGTAGCCCTGGTTTCACTATGACACCGATAGTCTCGAGCTCTCCAAAGCCGGCCAAAGCGCGCAAGTCCTTCCCCAACAATCCTTCGCAGAAGCAGCTTGATGCTATTCCGACCCTACAGTGTCAAGTCTGCGATGATCGCTTCCACGACGTCGCCGATCTGCGTAAGCATCTTTGGGATGTGCACTGTGCTCGCAACAAGCCCGAGAAGACCTTTACGAGCGAACTGCAGTGCGAGCTTTGCACCAACAAATTCCAGGATGAGGATGCCTTAGAGGAGCACATGAAGTGGCACTCGCAGAATCCTATTCTCAGCGGTAACAGCAATAGTAACAGCAACAGTGACAGCATAAGCAGCGCTATAAGCGCTGTACCCGAGAGGAAGACCTTCTATTGTGACATATGCGGCAAGTACTACAGTAACCACAAAGTATTCCTGCGTCACAAGAAGCTTCACAAGGTACTGCCCGCCTCAAGCATGCTGAATCTTCAGTCGCTCCAGAGCAGGCGTCACTACTGCCATCCTTGCCAGAAGAATTTTTCCACGGAGGCATCGCTCAGACGGCACAAAGCCTCCCCCTGCCACATGAGCGCGGTGCGCTCCCAGATACACGCTCCGCCCAAGAAGATCACCACTACCGCCATCGTGCACCATCCGCCGCCGGATCACTTGAAGCTGCAGACCGTCAAGAAGGAGCCCGGCCTGGATTATGCGACGACGAGCCAGCCCAGTTTACAGGCGAAGAAGAGGCCTGTCACCTGTCACATCTGCAAGATGATCTTCCCGAATATGAGCGTGTTGTACCAGCACAAGCAGCTAGTGCATAAGGTGCCAACTGGATTCAAAAACAAGGCAAGCTCTCAACAGACTGAGTGTGTGCCTCTCATGAGCGCTGAGGGTACGGTTTGTTGCAATCTCTGCGGCAAACAGTTCCCCGGCGTGTCGAATCTCAAGCAGCATTTTGCGCACAAACACAAGCTCAAAAGCTCGACCTTTCCCTGCAGTGCCCAGGGTTGCAAACTAGTTTTTAGCAGTATAAGCTCGCTTAAAGCCCATGAAACAACCCATTCGAGCCTGATTTATAACTGCAATCTCTGCGACAGGCACGTGTTCTCGAAGGCTGCGATGACGAAACACATGCTGATGATGCACAAGGCTATCTTTCAGTCTGGGGCTGATAAGACCACCCTTTGGTCCGAGACGGATCTGACGACTTACAATGTGAGGAATTGCCAGAGCACGGCTTGTCCGAAATGCAAGATCAAGTATCCTAATCTGAGGGCGCTTAAGATCCATTACTTGAAGTTCCATGAGAGTACATAA
- Protein Sequence
- MNEEASNSLDEVVELSQGLENACRLCLTTEQTRSSIFGVPHVSVPFAEKIRVCLAIQITSNDKLPTLVCTTCIQNINHWHSYKDVVSKSQEKLQQWLSKQNTIQPMVTVKEEPVDVEFRDENAQTAANESNMTNHVASGPENVEIENESTTPAVTEIAKAATVETTKKSPEQSSKFNERIDKEYPLEVQIKTEPVDTEDEDDCNIDVESVNSGELLINPMAVAVASNANNDRVMEADSTQKLTRKYVARKKMRRGPHTHFRGARLFKKKCIHCKINLHSKHSYTQHMSRYHGINNLPSNNGAKLQGQFTSGKQKSKLLQHPDNLDPNADTQSKSNPDEVEFEQMIKTDPLTPVQRNIIGQLKTFSCYSCQSVFFDRRHTLNHIRQHMPDLRIYTCIACLTEFADRSMYKLHCGASFECAMKIALVIPKVGNEKYFTCNMCLRSFNNRRELLSHLASHIGKEDRQMTQPSRAPVKLKSILPSPASKNDLTPSKRSPSGIRGPYMHGDPAHNHMCDLCGMIYRYKPNMFKHRDLCSTLPENIRTSYRCVHCNMTYLVYKKFYIHVLKEHKKKEITCFTCSAKFPTPDDYLTHHETHRVISGKENTNEPANEKQQGNDYSMMVDPLNDSHHPMDVSEKPFNCALCGEDFTSKAELTEHRNLHLKVKIYSCVICRSMFSSSGALEIHMKEHGIDDANEQGANSSCVEYGRGNRSQNSLNMSMSATSDPGGHFNHCYLCGKNFSNLANLKRHEKNLHIGQKRRWSCDECKRRFKSLEAYEEHVKTEHGPQPLPSNPEKKVTPAPPLQSNSGKPLMQCPKCPKTFAYQGNLILHCQNVHKENHFERIVASARLPHAAPVRRAIIGVRGGHSCDVCGKTFRMAQSLKTHRGWHLRTNYRLKKDVKDTTASLNDSTLSSPGFTMTPIVSSSPKPAKARKSFPNNPSQKQLDAIPTLQCQVCDDRFHDVADLRKHLWDVHCARNKPEKTFTSELQCELCTNKFQDEDALEEHMKWHSQNPILSGNSNSNSNSDSISSAISAVPERKTFYCDICGKYYSNHKVFLRHKKLHKVLPASSMLNLQSLQSRRHYCHPCQKNFSTEASLRRHKASPCHMSAVRSQIHAPPKKITTTAIVHHPPPDHLKLQTVKKEPGLDYATTSQPSLQAKKRPVTCHICKMIFPNMSVLYQHKQLVHKVPTGFKNKASSQQTECVPLMSAEGTVCCNLCGKQFPGVSNLKQHFAHKHKLKSSTFPCSAQGCKLVFSSISSLKAHETTHSSLIYNCNLCDRHVFSKAAMTKHMLMMHKAIFQSGADKTTLWSETDLTTYNVRNCQSTACPKCKIKYPNLRALKIHYLKFHEST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00691379; iTF_00692338; iTF_00693244;
- 90% Identity
- iTF_00692338; iTF_00691379; iTF_00693244;
- 80% Identity
- -