Ekie008028.1
Basic Information
- Insect
- Eupelmus kiefferi
- Gene Symbol
- -
- Assembly
- GCA_030522745.1
- Location
- JAPYZB010005311.1:3579-8629[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2.3 5.7e+02 3.3 4.4 1 23 363 385 363 385 0.97 2 19 0.00013 0.033 16.7 1.0 1 23 434 456 434 456 0.98 3 19 0.033 8.4 9.1 0.4 1 20 509 528 509 530 0.94 4 19 2 5.1e+02 3.5 1.2 2 23 571 592 570 592 0.96 5 19 0.00018 0.045 16.2 0.2 1 23 634 656 634 656 0.97 6 19 0.00047 0.12 14.9 0.1 1 23 662 684 662 684 0.98 7 19 0.00018 0.044 16.3 2.9 3 23 728 749 727 749 0.94 8 19 0.00064 0.16 14.5 0.3 2 23 757 779 756 779 0.96 9 19 0.00034 0.085 15.4 0.8 2 19 808 825 807 830 0.89 10 19 3.9e-05 0.0098 18.3 0.5 1 23 861 883 861 883 0.94 11 19 0.38 95 5.8 0.2 2 20 946 964 945 964 0.95 12 19 0.0098 2.5 10.8 0.1 2 23 983 1004 982 1004 0.97 13 19 0.0067 1.7 11.3 2.4 1 23 1036 1058 1036 1058 0.97 14 19 0.2 50 6.7 5.3 1 21 1077 1097 1077 1101 0.87 15 19 0.052 13 8.5 0.6 2 23 1159 1181 1158 1181 0.93 16 19 0.018 4.6 9.9 2.9 3 23 1210 1231 1208 1231 0.89 17 19 0.0015 0.37 13.4 0.1 1 23 1238 1262 1238 1262 0.95 18 19 0.0044 1.1 11.9 1.5 1 23 1267 1290 1267 1290 0.97 19 19 0.01 2.6 10.7 0.4 3 23 1322 1343 1320 1343 0.95
Sequence Information
- Coding Sequence
- ATGAACGAGGAGCCCAGCAACAGCCTCGACGAGGTGGTCGAGCTAAGTCAAGGCTTGGAGAACGCCTGCAGGCTCTGCCTCACCACCGAGCAAACGAGGTCCTCGATCTTCGGCGTGCCCCACGTCTCGGTGCCCTTCGCCGAGAAGATACGAGCTTGTTTGGCTATTCAGGTCACATCCAACGACAAGCTGCCTACGCTAGTGTGTACAACATGTATCCAAAATATAAACCATTGGCACTCGTACAAAGATGTAGTTTCAAAATCACAAGAGAAACTTCAACAATGGTTATCAAAACAGAATATCATTCAACCTATGGTAACTGTAAAAGAAGAACCAGTAGATGTGGAATTCCGAGATGAAAATGCTCAATCTGCAGCAAATGAATCTAATATGacAAATCATATTGCATCTGTTCCTGAATCTATGGAAGTTGAAAATGAAAGCAGGACTCCAGCTATTACCGAGATAGCTAAAGCAGCTACTGTAGAAACAACTAAAAAATCACCAGAGCAATCTTCAAAACTTAATGAAAGGATTGATAAAGAGTATCCTGaggttcaaataaaaaatgaacctGTTGATACAGAAGATGAAGATGATTGTAATATAGATGTTGAATCTGTGAACAGTGGAGAACTTTTAATTAATCCTATGGCAGTAGCAGTAGCTAGCAATGCTAACAGTGATAGAGTAATGGAAGCTGATTCAACCCAAAAACTCACAAGAAAATATGTGGCAAGGAAAAGAATGCGCCGTGGACCTCACACACACTTTAGAGGGGCTcgattatttaagaaaaaatgtattcattgtaaaataaatttgcactCAAAACACTCATATACGCAGCATATGTCTAGGTACCATGGCATTAACAATTTACCTTCAAATAATGGTGCCAAACTACAAGGACAGTTTACTTCaggtaaacaaaaatcaaaacttcTGCAACATCCAGATAATTTGGATCCCAATGCAGACACTTCAAATAAAAGTAATCCAGATGAAGTAGAATTTGAACAGATGATAAAAACAGATCCACTAACACCAATTCAAAAAAACATTATCGGCCAACTAAAGACTTTCTCTTGCTACTCTTGTCAATCAGTCTTCTTCGATCGAAGGCATACTTTAAATCATATAAGGCAGCATATGCCGGATTTACGCATCTACACTTGCATTGCTTGTCTTACTGAGTTTTCTGACAGGTCTATGTATAAACTTCATTGCGGTGCGTCATTTGAATGTGCTATGAAAATTGCTCTCGTGATTCCAAAAGTtggcaatgaaaaatattttacctgcAATATGTGTCTTCGCTCATTTAGTAACCGACGAGAACTTCTGTCCCACTTGGCCTCGCACATTGGCAAACAGGATCGACAAATGACTCAACCTTCAAGAACACCGGTAAAGCTCAAGTCTATCCTACCATCACCAGCTTCTAAGAATGACTTAACTCCTTCCAAAAGATCTTCAGGCGCTTCTGGACCGTACGTGAATGGGGATCCAGCCCACAACCACATGTGCGACCTGTGTGGAATGATCTACAGGTATAAGCCTAATATGTTCAAACATCGCGATCTTTGCTCTACCTTGCCAGAGAACATCCGCACTTCCTATAGATGCGTCCATTGTAACATGACTTACCTCGTGTACAAGAAGTTTTATATTCACGTGCTGAATGAACACAAGAAAAAGGAAATCACTTGTTTCACGTGTAGTGCAAAATTCCTAACCCCGGACGATTATCTCACCCATCACGAGACTCACCGAGTCATCAGCGGTAAAGAGAATACGAACGAGCCAGTAAATGAAAAGCAGCAGGGCAACTACTCAATAATGGTGGACCCGCTGAACGATTCCCATCACCCGATGGACGTAAGCGAGAAGCCATTCAATTGCGCGCTTTGCGGCGAAGATTTCACCTCCAAGGCCGAACTCACCGAGCACCGCAACCTTCATCTCaaggtaaaaatatattcttgcGTGATATGTCGCAGTATGTTCAGTAGTTCGGGAGCTTTGGAGATACATATGAAGGAACATGGTATAGATGATGCCAATGAACAAGACGCCAACAGCTCATGTGTCGAATACGGGCGGGGTAGTCGTTCGCAAAATTCACTGAACATGTCCTTGTCGGCTACGTCTGATCCAGGTGGGCATTTCAATCATTGCTATACGTGTGGCAAGAATTTCTCGAATCTGGCGAATTTGAAACGTCACGAGAAAAATTTGCATATAGGACAGAAACGCCGTTGGAGCTGCGATGAATGTAAGCGACGCTTTAAGTCACTGGAAGCTTATGAAGAACACGTGAAGACGGAACACGGACCCCAGCCGCTACCGCCAAGCCCTGAGAAGAAAGTAACGCCTGCACCTCCACTACAGTCGAATAGTGGCAAGCCACTGATGCAATGCCCTAAATGTCCCAAGACCTTCGCCTACCAGGGCAATCTCATCCTCCACTGTCAGAACGTTCACAAGGAGAATCACTTTGAGCGCATCGTAGCTTCTGCTCGTCTGCCCCATTCCGCCCCAGTGCGAAGGGCCATAATAAATCCCCGTGGTGGTTACTCGTGCGATGTCTGCGGAAAAACCTTCCGTATGGCGCAGTCACTCAAAACACATCGCGGTTGGCACTTACGTACCAATTACCGGCTCAAAAAGGATCTCAAGGATACAACCGCGAGCTTGAACGACTCGACGATGAGTGGCCCTGGTTACACAATGACGCCGGTAGTCTCAAGCTCTCCGAAGCCTGCCAAAGCGCGCAAGTCCTTCCCCAACAATCCTTCACAGAAGCAGCTTGACGCTATTCCGACCTTACAGTGTCAAGTCTGTGATGATCGCTTCCACGATGTCGCCGATTTGCGTAAACACCTTTGGGATGTGCACTGTGCTCGCAACAAGCCCGAAAAGACCTTCACGAGTGAACTGCAATGCGAGCTTTGCACCAACAAATTCCAGGACGAAGAAGCCTTAGAGGAGCACATGAAGTGGCACTCGCAAAATCCTATTCTCAGCAGTCACAGCAATAGCAACAGCAACAGTAACAGCATAAGCAGCGCTATAAGCGCTGTGCCTGAGAGGAAGACTTTCTATTGTGAGATATGCGGCAAGTACTACAGTAACTACAAAGTATACCTGCGTCACAAAAAGCTTCACAAGGTACTGCCTGCCTCAAGCATGCTGAATCTTCAGTCGCTTCAGAGCAGGCGTCATTTCTGCCATCCTTGCCAGAAGAATTTTTCCACGGAGGCATCGCTCAGACGACACAAAGCCTCCCCTTGCCATGTGAGCGCGGTGCGCTCCCAGATACACGCTCCGCCCAAGAAGATCACCACTACGGCGATCGTACACCATCCACCGCCGGACCACTTGAAGCTACCGACCGTCAAGAAGGAGCCCGGCCTGGATTATGCGACGACGAGCCAGCCCAGTTTGCAGACGAAGAAGAGGCCTGTCACCTGTCACATCTGCAAGATGATCTTCCCGAATATGAGCGTGTTGTACCAGCACAAGCAGCTAGTGCATAAGGTGCCGTCTGGATTCAAAAATAAGGCAAGCTCTCAGCAGACTGAGTGTGTGCCTCTCATGAGCGCTGAGGGTATGGTTTGTTGCAATCTCTGCGGCAAACAGTTCCCCGGCGTGTCGAATCTCAAGCAGCATTTTGCGCACAAACACAAGCTTAAAAGCTCGACGTTTCCCTGCAGTGCCCCGGGTTGCAAACTTGTTTTTAGCAGCATAAGCTCGCTCAAAGCCCACGAAACAACCCATTCGAGCCTGATTTACAATTGCAATCTCTGCGACAGGCACGTGTTCTCGAAGGCTGCGATGACGAAACACATGCTGATGATGCACAAGGCTATCTTTCAGTCTGGGGCTGATAAGAACACCCTTTGGTCTGAGACGGATCTGACCACTTACAATGTGAGGAATTGCCAGAGCACGGCTTGTCCGAAATGCAAGATCAAGTATCCTAATCTGAGGGCACTTAAGATCCATTATTTGAAGTTCCATGAGAGTGCATAG
- Protein Sequence
- MNEEPSNSLDEVVELSQGLENACRLCLTTEQTRSSIFGVPHVSVPFAEKIRACLAIQVTSNDKLPTLVCTTCIQNINHWHSYKDVVSKSQEKLQQWLSKQNIIQPMVTVKEEPVDVEFRDENAQSAANESNMTNHIASVPESMEVENESRTPAITEIAKAATVETTKKSPEQSSKLNERIDKEYPEVQIKNEPVDTEDEDDCNIDVESVNSGELLINPMAVAVASNANSDRVMEADSTQKLTRKYVARKRMRRGPHTHFRGARLFKKKCIHCKINLHSKHSYTQHMSRYHGINNLPSNNGAKLQGQFTSGKQKSKLLQHPDNLDPNADTSNKSNPDEVEFEQMIKTDPLTPIQKNIIGQLKTFSCYSCQSVFFDRRHTLNHIRQHMPDLRIYTCIACLTEFSDRSMYKLHCGASFECAMKIALVIPKVGNEKYFTCNMCLRSFSNRRELLSHLASHIGKQDRQMTQPSRTPVKLKSILPSPASKNDLTPSKRSSGASGPYVNGDPAHNHMCDLCGMIYRYKPNMFKHRDLCSTLPENIRTSYRCVHCNMTYLVYKKFYIHVLNEHKKKEITCFTCSAKFLTPDDYLTHHETHRVISGKENTNEPVNEKQQGNYSIMVDPLNDSHHPMDVSEKPFNCALCGEDFTSKAELTEHRNLHLKVKIYSCVICRSMFSSSGALEIHMKEHGIDDANEQDANSSCVEYGRGSRSQNSLNMSLSATSDPGGHFNHCYTCGKNFSNLANLKRHEKNLHIGQKRRWSCDECKRRFKSLEAYEEHVKTEHGPQPLPPSPEKKVTPAPPLQSNSGKPLMQCPKCPKTFAYQGNLILHCQNVHKENHFERIVASARLPHSAPVRRAIINPRGGYSCDVCGKTFRMAQSLKTHRGWHLRTNYRLKKDLKDTTASLNDSTMSGPGYTMTPVVSSSPKPAKARKSFPNNPSQKQLDAIPTLQCQVCDDRFHDVADLRKHLWDVHCARNKPEKTFTSELQCELCTNKFQDEEALEEHMKWHSQNPILSSHSNSNSNSNSISSAISAVPERKTFYCEICGKYYSNYKVYLRHKKLHKVLPASSMLNLQSLQSRRHFCHPCQKNFSTEASLRRHKASPCHVSAVRSQIHAPPKKITTTAIVHHPPPDHLKLPTVKKEPGLDYATTSQPSLQTKKRPVTCHICKMIFPNMSVLYQHKQLVHKVPSGFKNKASSQQTECVPLMSAEGMVCCNLCGKQFPGVSNLKQHFAHKHKLKSSTFPCSAPGCKLVFSSISSLKAHETTHSSLIYNCNLCDRHVFSKAAMTKHMLMMHKAIFQSGADKNTLWSETDLTTYNVRNCQSTACPKCKIKYPNLRALKIHYLKFHESA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00690531;
- 90% Identity
- iTF_00690531;
- 80% Identity
- -