Euro012442.1
Basic Information
- Insect
- Eupelmus urozonus
- Gene Symbol
- -
- Assembly
- GCA_900480035.1
- Location
- UELX01003348.1:17924-22977[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.7 1.9e+02 3.3 4.4 1 23 363 385 363 385 0.97 2 19 0.00031 0.035 15.1 1.2 1 23 434 456 434 456 0.98 3 19 0.025 2.8 9.1 0.4 1 20 509 528 509 530 0.94 4 19 1.5 1.7e+02 3.5 1.2 2 23 571 592 570 592 0.96 5 19 0.00014 0.015 16.2 0.2 1 23 633 655 633 655 0.97 6 19 0.00035 0.04 14.9 0.1 1 23 661 683 661 683 0.98 7 19 0.00011 0.012 16.6 2.8 3 23 727 748 726 748 0.94 8 19 0.0027 0.3 12.2 0.2 2 23 756 778 755 778 0.93 9 19 0.00026 0.029 15.4 0.8 2 19 807 824 806 829 0.89 10 19 2.9e-05 0.0033 18.3 0.5 1 23 860 882 860 882 0.94 11 19 0.28 32 5.8 0.2 2 20 945 963 944 963 0.95 12 19 0.0074 0.83 10.8 0.1 2 23 982 1003 981 1003 0.97 13 19 0.0051 0.57 11.3 2.4 1 23 1035 1057 1035 1057 0.97 14 19 0.069 7.8 7.7 5.2 1 21 1076 1096 1076 1100 0.88 15 19 0.039 4.4 8.5 0.6 2 23 1158 1180 1157 1180 0.93 16 19 0.014 1.5 9.9 2.9 3 23 1209 1230 1207 1230 0.89 17 19 0.0011 0.13 13.4 0.1 1 23 1237 1261 1237 1261 0.95 18 19 0.0033 0.38 11.9 1.5 1 23 1266 1289 1266 1289 0.97 19 19 0.0079 0.89 10.7 0.4 3 23 1321 1342 1319 1342 0.95
Sequence Information
- Coding Sequence
- ATGAACGAGGAGGCCAGCAACAGCCTCGACGAGGTGGTCGAGCTCAGCCAGGGCTTGGAGAACGCCTGCAGGCTCTGCCTCACCACCGAGCAAACGAGGTCCTCGATCTTCGGCGTGCCCCACGTCTCGGTGCCCTTCGCCGAGAAGATACGAGCTTGTTTGGCTATTCAGATCACATCCAACGACAAGCTACCTACGGTAGTGTGTACAACATGTATCCAAAACATAAACCATTGGCACTCGTACAAAGATGTAGTTTCAAAATCACAAGAGAAACTTCAACAATGGTTATCAAAACAGAATACCATTCCAcCTATGGTAACTGTAAAAGAAGAACCAGTAGATGTAGAATTCCGAGATGAAAATGCTCAATCAGCAGCAAATGAATCTAATATGACTAATCATGTTGCATCTGTTCCTGAATCTATGGAAGTTGAAAATGAAAGCACGACTCCAGCTATCACCGAGATAACTAAAGCACCTACTGTAGAAACAACTAAAAAATCACCAGAGCAATCTTCAAAACTTAATGAAAGGATTGATAAAGAGTATCCTGaggttcaaataaaaaatgaacctGTTGATACAGAAGATGAAGATGATTGTAATATAGATGTTGAATCTGTGAACAGTGGagaacttttaattaatcctATGGCAGTAGCAGTAGCTAGCAATGCTAACAGTGATAGAGTAATGGAAGCTGATTCAACCCAAAAACTCACAAGAAAATATGTGGCAAGGAAAAGAATGCGCCGTGGACCTCACACACACTTTAGAGGGGCTcgattatttaagaaaaaatgtattcattgtaaaataaatttgcactCAAAACACTCATATACGCAGCATATGTCTAGGTACCATGGCATTGCCAATTTACCTTCAAATAATGGTGCCAAAGTGCAAGGACAGTTTACTTCaggtaaacaaaaatcaaaacttcTGCAACATCCAGATAATCTGGATCCCAATGCAGACACTTCAAGTAAAAGTAATCCAGATGAAGTAGAATTTGAACAGATGATAAAGACAGATCCACTAACaccaattcaaaaaaatattatcggcCAACTAAAGACTTTCTCTTGCTACTCTTGTCAATCAGTCTTCTTCGATCGAAGGCATACTTTAAATCATATAAGGCAGCATATGCCGGATTTACGCATCTACACTTGCATTGCTTGTCTTACTGAGTTTTCTGACAGGTCTATGTATAAACTTCATTGCGGTGCGTCATTTGAATGTGCTATGAAAATTGCTCTCGTGATTCCAAAAATTggcaatgaaaaatattttacctgcAATATGTGTCTTCGCTCATTTAGTTACCGACGAGAACTTTTGTCCCACTTGGCCTCGCACATTGGCAAACAAGATCGACAAATGACTCAACCTTTAAGAACACCGGTAAAGCTCAAGTCTATCCTACCATCACCAGCTTCTAAGAATGATTTAAGTCCTTCCGAAAGATCTTTAGGCACTTCTGGACCGTACATGAATGGGGATCCAGCCCACAACCACATGTGCGACCTGTGTGGAATGATCTACAGGTATAAGCCTAATATGTTCAAGCATCGCGATCTTTGCTCTACCTTGCCAGAGAATATCCGCACTTCCTATAGATGCGTCCATTGTAACATGACTTACCTCGTATACAAGAAGTTTTATATTCACGTGCTGAATGAACATAAGAAAAAGGAAATCACTTGTTTCACATGTAGTGCTAAATTCCTAACCCCGGACGATTATCTCACCCATCACGAGACTCACCGAGTTATCAGCGGTAAAGTGAATACGAACGAGCCAGTAAATGAAAAGCAGCAGGGCAACTACTCGATGGTGGACCCGCTGAACGATTCCCATCACCCGATGGACGTAAGCGAGAAACCATTCAATTGCGCGCTTTGCGGCGAAGATTTCACCTCTAAAGCCGAACTCACCGAGCACCGCAACCTTCATCTCaaggtaaaaatatattcttgcGTGATATGTCGCAGTATGTTCAGTAGTTCGGGAGCTTTGGAGATACATATGAAGGAACATGGTATAGACGATGCCAATGAACAAGACGCCAACAGCTCATGTGTCGAATACGGGCGGGGTAGTCGTTCGCAAAATTCACTGAACATGTCCTTGTCGGCTACGTCTGATCCAGGTGGGCATTTCAATCATTGCTATCAGTGTGGCAAGAATTTCTCGAATCTGGCGAATTTGAAACGTCACGAGAAAAATTTGCATGTAGGACAGAAACGCCGTTGGAGCTGCGATGAATGTAAGCGACGCTTTAAGTCACTTGAAGCTTATGAAGAACACGTGAAGGCAGAACACGGACCCCAGCCGCTACCGCCAAGCCCTGAGAAGAAAGTAACGcCTGCACCTCCACTACAGTCGAGTAGTGGCAAGCCATTGATGCAATGCCCTAAATGTCCCAAGACCTTCGCCTACCAGGGCAATCTCATCCTCCACTGTCAGAACGTTCACAAGGAGAATCACTTTGAGCGCATCGTAGCTTCTGCTCGTCTGCCCCATTCCGCACCAGTGCGCAGGGCCATAATAAATCCCCGTGGTGGTTACTCGTGCGATGTCTGCGGAAAAACCTTCCGTATGGCGCAGTCACTCAAGACGCATCGCGGTTGGCACTTACGTACCAATTACCGGCTCAAAAAGGATCTCAAGGATACAACCGCGAGCTTGAACGACTCGACGCTGAGTGGCCCTGGTTACACAATGACGCCGGTAGTCTCGAGCTCTCCGAAGCCTGCCAAAGCGCGCAAGTCCTTCCCCAACAATCCTTCACAGAAGCAGCTTGATGCTATTCCGACCTTACAGTGTCAAGTCTGTGATGATCGCTTCCACGATGTCGCCGATTTGCGTAAACACCTTTGGGATGTGCACTGTGCTCGCAACAAGCCCGAGAAAACCTTCACGAGCGAGCTGCAATGCGAGCTTTGCACCAACAAATTCCAGGACGAAGAAGCCTTAGAGGAGCACATGAAGTGGCACTCGCAAAATCCTATTCTCAGCAGTCACAGCAATAGCAACAGCAACAGTAACAGCATAAGCAGCGCTATAAGCGCTGTACCTGAGAGGAAGACCTTCTATTGTGAGATATGCGGCAAGtactacagtaactacaaagtATACCTGCGTCACAAAAAGCTTCACAAGGTACTGCCTGCCTCAAGCATGCTGAATCTTCAGTCGCTCCAGAGCAGGCGTCATTACTGCCATCCTTGCCAGAAGAATTTTTCCACGGAGGCATCGCTCAGACGACACAAAGCCTCCCCTTGCCATGTGAGCGCGGTGCGCTCCCAAATACACGCTCCGCCCAAGAAGATCACCACTACGGCGATCGTACACCATCCACCGCCTGACCACTTGAAGCTACCGACCGTCAAGAAGGAGCCCGGCCTGGATTATGCGACGACGAGCCAGCCCAGTTTGCAGGCGAAGAAGAGGCCTGTCACCTGTCACATCTGCAAGATGATCTTCCCGAATATGAGTGTACTGTACCAGCACAAACAGTTAGTACATAAGGTGCCGTCTGGATTCAAAAACAAGGCAAGCTCTCAGCAGACTGAGTGTGTGCCTCTCATGAGCGCTGAGGGTATGGTTTGTTGCAATCTCTGCGGCAAACAGTTCCCCGGCGTGTCGAATCTCAAGCAGCATTTTGCGCACAAACACAAGCTCAAAAGCTCGACCTTTCCCTGCAGTGCCCCGGGTTGCAAACTCGTTTTTAGCAGCATAAGCTCGCTCAAAGCCCACGAAACAACCCATTCGAGCCTGATTTACAACTGCAATCTCTGCGACAGGCACGTGTTCTCGAAGGCTGCGATGACGAAACACATGCTGATGATGCACAAGGCTATCTTTCAGTCTGGGGCTGATAAGAACACCCTTTGGTCTGAGACGGATCTGACCACTTACAATGTGAGGAATTGCCAGAGCACGGCTTGTCCGAAATGTAAAATCAAGTATCCTAATCTGAGGGCACTTAAGATCCATTATTTGAAGTTCCATGAGAGTGCATAG
- Protein Sequence
- MNEEASNSLDEVVELSQGLENACRLCLTTEQTRSSIFGVPHVSVPFAEKIRACLAIQITSNDKLPTVVCTTCIQNINHWHSYKDVVSKSQEKLQQWLSKQNTIPPMVTVKEEPVDVEFRDENAQSAANESNMTNHVASVPESMEVENESTTPAITEITKAPTVETTKKSPEQSSKLNERIDKEYPEVQIKNEPVDTEDEDDCNIDVESVNSGELLINPMAVAVASNANSDRVMEADSTQKLTRKYVARKRMRRGPHTHFRGARLFKKKCIHCKINLHSKHSYTQHMSRYHGIANLPSNNGAKVQGQFTSGKQKSKLLQHPDNLDPNADTSSKSNPDEVEFEQMIKTDPLTPIQKNIIGQLKTFSCYSCQSVFFDRRHTLNHIRQHMPDLRIYTCIACLTEFSDRSMYKLHCGASFECAMKIALVIPKIGNEKYFTCNMCLRSFSYRRELLSHLASHIGKQDRQMTQPLRTPVKLKSILPSPASKNDLSPSERSLGTSGPYMNGDPAHNHMCDLCGMIYRYKPNMFKHRDLCSTLPENIRTSYRCVHCNMTYLVYKKFYIHVLNEHKKKEITCFTCSAKFLTPDDYLTHHETHRVISGKVNTNEPVNEKQQGNYSMVDPLNDSHHPMDVSEKPFNCALCGEDFTSKAELTEHRNLHLKVKIYSCVICRSMFSSSGALEIHMKEHGIDDANEQDANSSCVEYGRGSRSQNSLNMSLSATSDPGGHFNHCYQCGKNFSNLANLKRHEKNLHVGQKRRWSCDECKRRFKSLEAYEEHVKAEHGPQPLPPSPEKKVTPAPPLQSSSGKPLMQCPKCPKTFAYQGNLILHCQNVHKENHFERIVASARLPHSAPVRRAIINPRGGYSCDVCGKTFRMAQSLKTHRGWHLRTNYRLKKDLKDTTASLNDSTLSGPGYTMTPVVSSSPKPAKARKSFPNNPSQKQLDAIPTLQCQVCDDRFHDVADLRKHLWDVHCARNKPEKTFTSELQCELCTNKFQDEEALEEHMKWHSQNPILSSHSNSNSNSNSISSAISAVPERKTFYCEICGKYYSNYKVYLRHKKLHKVLPASSMLNLQSLQSRRHYCHPCQKNFSTEASLRRHKASPCHVSAVRSQIHAPPKKITTTAIVHHPPPDHLKLPTVKKEPGLDYATTSQPSLQAKKRPVTCHICKMIFPNMSVLYQHKQLVHKVPSGFKNKASSQQTECVPLMSAEGMVCCNLCGKQFPGVSNLKQHFAHKHKLKSSTFPCSAPGCKLVFSSISSLKAHETTHSSLIYNCNLCDRHVFSKAAMTKHMLMMHKAIFQSGADKNTLWSETDLTTYNVRNCQSTACPKCKIKYPNLRALKIHYLKFHESA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00690531;
- 90% Identity
- iTF_00690531;
- 80% Identity
- -