Etru007475.1
Basic Information
- Insect
- Eudonia truncicolella
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_949315975.1
- Location
- OX438831.1:2108839-2125978[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-77 1.2e-72 245.4 21.8 1 297 126 433 126 436 0.85 2 2 1 2.8e+04 -7.1 17.6 1 48 432 478 432 506 0.70
Sequence Information
- Coding Sequence
- ATGGGCAAGCGGTCCGCGATGGCAACGCCTGATAACAGTGATGAAGAAGGTGGAGACGCCTTCACAGACGGAGACTTCGATGATACAGACGAAGAAACGGTCGTAGAACGACTCGGAGACTCGCATAAGTCTCAGATCCCTGTTAATGAAACTGTCAATTCTGAAGTGAAAAAAGAAAATGGACTTTTGTCTAGACAACACTCTAATGGATACGCAGAACCGTCTAAAATAAATGGACACAAAAGTACTGACAATGGTATTTCAAGTGATGTGGACATTCGTAGTAGTGATGAAGCTGGAGCAGATTTGCGAAGGGATTCTCATGGGGACCAAAACCCCTCCATAGTTGGAATTCTTGGAGATCAACAAAATCATGCGGAACAGCGGctagcggcgcggcgggcggcgcgcgccgaGGCGCGGGAGATCCGCATGCGGGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCCTACGACATGTACGCGGGCGGCACCCGCACCGCCGCCGACTTCAAAGAGTCGgtggggcggcgcggcggcgcgcggctggCGGCGCTGAGCCCGGCCGCGCTGCACTCGCCGCGCCGCAGCTCCGAGGACTCCGCCGACGACGCCTTCAGCATCAAGGATCTCAGGCATGAGCTGAAAGAAGTGGAGGAGAAGTTCCGCAAGGCAATGATCCTGAACGCGCAGCTGGACAATGACAAGGCTGCGCTGGGCTACCAGCTTGAGTTGCTCAAGGACCGGATAGAGGAGCTGCACGAAGAGTACGCGCAGCTGCAGCGGGAGCATAAAGAGAAGTGTTCGTCTCACGAGCGGCTGAAGCGCGAGCACGTGTCCCTGGAGCGGGAGGTCCGCTGCGCGCGGGACGCGGTGCGCGCGCGGGACGCGGCCGCGGCGCACGCGGGGTTCGCGTTCGTGGACGCGGCGGCCGCGCCCGAGCGGCACAACGGGCTCAACGGTCATGTGGGGGACAAGGGGGACAAGGGGGACGCGCCCGGCTTCGGGGAGGTGCCCGCGCTGGCGCTGGTCTCGCACGAGTCCGAGCAGATGTTGAACGACGCGGGTGAGGGGACGCTGGACGTGCGGTTGCAGAAGCTGCTAGGGTCGAAGCAGACGCTAGAGTCGGAGGTGCGCAAGCTCAAGCTGCAGCTCAACGAGGAGCGCGCCGCCACGCACAACGGCGTCGCCTCCCACCACGACCAGGAGTACGAGACGGAGCTGGAAGCCCTCCGGCGATGCGTATCCGAAGCAAAGGGGAGAGCAGCGCGAGCCGAAGCCGAAGCCGCGTTACAAGCGGCGGCCGTCGCGCGACTCGAGGCGCAAGTGGCCAGGCTGCGGGCGAGGCAGGACCACCAGGACGAACACGAGGAACAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGGGAGGCGCGGGAAGCCTTGAACCGCGTGGAGGAGTTGGAAACGGAGAACAGCCACCTCACGAAGCGGCTGGACAAGCTCAAGAACGCCAAGTCCGCGCTGCTCAAGGAGCTGTGA
- Protein Sequence
- MGKRSAMATPDNSDEEGGDAFTDGDFDDTDEETVVERLGDSHKSQIPVNETVNSEVKKENGLLSRQHSNGYAEPSKINGHKSTDNGISSDVDIRSSDEAGADLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGGTRTAADFKESVGRRGGARLAALSPAALHSPRRSSEDSADDAFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSHERLKREHVSLEREVRCARDAVRARDAAAAHAGFAFVDAAAAPERHNGLNGHVGDKGDKGDAPGFGEVPALALVSHESEQMLNDAGEGTLDVRLQKLLGSKQTLESEVRKLKLQLNEERAATHNGVASHHDQEYETELEALRRCVSEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00284562;
- 90% Identity
- iTF_00681668;
- 80% Identity
- -