Basic Information

Gene Symbol
hang
Assembly
GCA_905231855.1
Location
HG993128.1:12641258-12648955[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.031 4.7 8.4 1.3 3 23 264 285 263 285 0.93
2 17 0.012 1.9 9.7 2.7 1 23 455 478 455 478 0.91
3 17 0.0011 0.17 13.0 1.7 2 23 585 607 584 607 0.95
4 17 0.0085 1.3 10.2 0.1 1 23 615 638 615 638 0.95
5 17 2.1e-05 0.0033 18.4 0.1 2 23 734 755 733 755 0.97
6 17 1.5e-05 0.0023 18.9 2.5 2 23 799 821 798 821 0.96
7 17 0.0032 0.48 11.5 0.3 2 23 830 852 829 852 0.95
8 17 0.00026 0.04 15.0 0.2 1 23 865 888 865 888 0.98
9 17 0.00024 0.036 15.1 1.0 1 23 916 938 916 938 0.99
10 17 0.001 0.16 13.1 0.9 1 23 946 969 946 969 0.96
11 17 0.0073 1.1 10.4 0.4 2 21 977 996 976 997 0.92
12 17 0.00015 0.022 15.8 0.4 3 23 1055 1075 1054 1075 0.98
13 17 1.8e-05 0.0027 18.6 0.1 1 23 1110 1132 1110 1132 0.98
14 17 4.8e-05 0.0073 17.3 0.2 2 23 1157 1179 1156 1179 0.93
15 17 0.022 3.3 8.9 0.3 2 19 1199 1216 1198 1218 0.93
16 17 0.0027 0.41 11.8 0.7 3 23 1234 1254 1234 1254 0.98
17 17 0.0011 0.16 13.0 0.2 1 23 1386 1408 1386 1408 0.97

Sequence Information

Coding Sequence
ATGACAGAAGAATCAATATTACGTGCACGTCAGAATTGCTGTCGCTTATGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTACGCGGCTGATAAGGAGCCCCTAGCTACCAAAATTCTATCTTGTGTCAATATTAAGGTGTCGCCGATTGATAGGCTATCGTTGCGAGTATGTCACGCTTGCATCAGTTACTTGAATTCATGGCAGAGTTTCAAGAATCGATGTGTTGCCTCACAGAACAAGCAACGAAGTTGGCTGGATATATCGAAGAAAATGGAGAAAAAACAAATTGGCTCAGCGATTCCCCTCTCGGCTGGGCCTCCAGTGGGCAGCAGCGGTGGAGGCGGCGGAGCAGGAAATGGTGCGGATGCGAGAGGAGTCCCGCATGAAGACGGAGAGGAGGACCAAGAGAACAACCCACTTGCCACATCGATTTTGGAAGGCATTTCTTCGCTTAAGAAACGGCGGTCTTTAACGGTTTACCCAATACCTGTTCATATCAAAGACGAGCCAGTGGATGAAGAAGAGTATGATCCCAAACATGACGAGTCTGACATCGATCCAACGCTCTTTTTGGAACGCACTGAAGAGGAGGGCTCTGACAATATGTCACAAAAGGAACAGCACTTGGCTTCGTTAGGTTTAAAACAAGCCTCAAATTCAGTTAACCCCTTAAATTATCTGGCTGATTACAGTTTCGATGAAGAGAAAACTAACCGGCCATCCATTGACAAACCACTAGAAATATCTACGACAACAACAGAAGTAAAAGAGGCATCCTGCAGAGCTTGTAATCTAAAGTTTTCCACAAGAGCAAATGCTCGTCGGCACGAGCGCAACCTTCATCCACATCTTTTCTCCAGCATTGGACTGGTTAACCCCGTTTCAAAAGGACTCAGTGTAGTCTCATCAATGCAACAAGGAATTAAAACTACTCAGGCGGTTCGATCAGTGTTGAAACCCGATCAGCTTGTACTCTTTGACTATGATCAACCAGAAAAGTATCAGCAACTTCTGACAGATGAGAAAATATTGTTTATGCAGCGACACGAAGATTTCCTGCAGCAGTATCAGAATATGACGTGCAACTGTTGTCTACGCACGCACGCAACGTACAAAAACTTCATGGCGCACATGCGTAAAAAGTATCATTCGCTGCCGAGGAACTTGTGCTTCAAATGCTTGAAGCAGAACGATTCGAAAGCCCTTTTCATATCGCATCTTAAGAAGCGAAATTGTATTAACTTATACAAGGTATATAACAGCCTCATTGATGCCGGTGTTTTAAAGAAAGACTCCTTAGGGTGGTCGCCCGATAAGCTGCGTGCCAAAGAATTGCTAGTAAATAAGATCTACGAATGCAAGATTTGCTCGAAGCACTTCCGACTAAAACTCGAGTTTCGAAGTCATGTGTATGAGGAGCACGCCGATTACCAGAAAAAGGACGTATTACCGGGTCATTGTGGATTCTGCGGCTTAGAAATCGAGGATCCCTTCGAGCGCAAGCGCCACTACAATAACATGGATTGTATTGTTATATTGAGATGCATAACTTGCGAGGAAAAGTTCGATAATCATCAGAAATTCCTCGATCATGTGTATTCCAAGCATTTAGCTAACAACAACGAAGTGCAAAAGAGCAATCTGATGAAGGAGCTTTCTTCAACGACTTCTACGGAGAGTTCGCCATCAAAGAAATCCGAAACCCCTCAGAAACCACAGTTCTTTTCCCGTCTACCTCAGAGCTGCAACATTTGTGGCCAGCACTATAACAACTACAACAACGTCTTGCGGCACATGGAATCGAAACATCCGGACCAGCTGCCGCAAACATACAAATGCACTCTGTGCTTAGTGGGTTACCCGCGTTTGATGAACCTTAGGGAGCACATGATTGAAGTGCATGGCATGAAAGTGGACAAAGTTCGAAACAACAGTTTTGACTATATTGTCGACTCGCCCACGGTTCAAGGAGCACTTCCACGACCAGACAAAATGATCGCAGATGCGTACACAGGCCGATATGATTACGTCATGAAGGATTTGATGTCGATAACAAATGGCGGAACATCCCTGAACGAGAATACCAATGAAAATGACGAAGACGGCAACCTTGGAGACATGCCTGCAGCAAAGAAAATAAAGCTTGAGTCTGGAGCAATTGTAGCAATAGGTACAGCCAATTTGAAAGAATGCCCAATATGCAGTGCGGTCTTCAACAACAACATCGGGCTTTCCAATCACATGCGCACTCATACAACTGGAGACGTGGGCGCCGAAGATGATATACCTGAAGAAGAAGATGAAGTGGCTGAGAAGAAGTCAATCGATCCACTTTTCAAACGAAGCTTAGAGCTGGCCGCAGACCGGCGATTCCGTCGAATGCGTTGTCGCATTTGCCAGAAGCGATTTTCCTCAAAGAAGAGCTACCGCCGTCACATGCTGATTGATCATCAAATCCGGAATGTGCAGTTCATCAAGTGCAAACTTTGCAATGCTGAATTCGCCTACGAGAAGGGTCTCAAAGTGCATATGTTCAAGATACACAACACACTGCTGAAAGATGAAATGATTGTGAAGCAGTATGAGTGTGACATATGTTCGATTGTGTATCGAACAGAGGAACAGTTGTTGCTTCATAAGAAGACTGTTCATGGCAACGAAAGCGCCCAAGCGGACGATGAACTTCCCCAAATGATGGATCAAAGCATGGAGTCAACGGCTCCTCTGTACTGGTATCAGTGCCGCTACTGTCCATCAAATTTCAACACAAACAAAAAACTGGCCATTCACATTAACTCGCATTATGAATTCGACTCAAATGACTACTCTTGCAAAGACTGCGGAAACGTGTACAGTGGACGTAAAAGTCTTTGGGTGCATCGCTACAAGAAACATCCGCCCGTTGCCGATCCGTCCGAGTGTTCACAATGCAAGAAAATTTTCTTTGACAAACAAATGCTGGAAAATCATGCGCAATCATGTACGAAGAAAACATCAACTGCGGTAGTAGCTGGAGGAACATCAGAAACAGAAGTCGCACCATCCTTTCAGCACAAAACGGGTGATGATGACGATGTCCCCGATTCCCAGCCTGAAGCCACCATTGGAGATGGCACCACAAGTCGTAAAATCAAACTTCCCGAAGTTGCTTGCACTATTTGTGCACAGAAATTCACTGATCAGGAGCTCTTTACAAAACACATTCAGATGCACGAAATGGAGTTGTACACTGACAACCCGCTAGCAGCTATGTTTGATACAGGGCCCGCTGATCCAAATCAGTTCTATCTGGATCGTGTCAACGACAATGGACAGTACGTGTGTGACATTTGCAACAAAGCATTTGCACAGATGACCGCACTTAAGGTCCACCGCAAGTGGCATTTTCGTGGTGATAGCAAACAGACCCCTGCCGATGTAAATGCGCCAAAGACGATAAGACGCAAGAGAGAACTTAAATGCGATTACTGCCCGTCGACTTTTATCAGTTCCAACAACCTCAGGCGTCATATAGCCGAACTGCATAAGTCCGAAATTTCCAACTGGCCAGAACCACCCAAAATTGAACCCGAAAAGTACCTTCAATGCACTAAATGTGACCTGAAATTCGAAACCAAAAAAGATTGGATCGAACATAAAGTTAATGAAGCAAAGATTGCCAAACCATACGGCCCATTCCAGTGGGGTTGCGAGATCTGTGGGACGTACTTGTCACGCCGAGAAAAACTCATACATCACATGTTGGCGCACATTAAGGAGACCAACGGCCAGTTGAGTGTGGAAGGCGAAAATTATCCCGGCGAAAGTAATTCTCAGGATTCCGAGTCATCCAGTCATCAAGGAGCGTCCGAACAGAGGCAAATCGATGACGAGGACGATGATGAGGAAGACGAAGAGGAAGAATTCGACGGTGATGAGGACGATGCTGAAGAAACAGTCGATGCAGTAAACCACGATGACAACGCGAACGACGGACAAAATGACGATGATATCGATCAGCAATCAGAGCTGGGACCAAGGCTACTGCCTGAATCAAATGATGACAGTAACGACTCAAGTGCCCAGAGCTCTGACTCAGACGATTCATCATCGGATGACGATGAACCAGAACCTCCCTTACATCGGGCGGAGCATAAAACACGATTCCCTTGCGATCTATGTCAGGTGTACTTTGAATCATCGGCGGAACTACAAAGGCATGTCACTAGTCATTTCCTTAATGGCCCAGGCTCAGTAACACTGACCACCATAACAAAGGACAAGCCTAAACCATTAGAAATCCATGCGAAAGACGATGACGACGACGATGAAGATGACGATATGACCGAGGCAGACGTTGTTGACTCTTAA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLATKILSCVNIKVSPIDRLSLRVCHACISYLNSWQSFKNRCVASQNKQRSWLDISKKMEKKQIGSAIPLSAGPPVGSSGGGGGAGNGADARGVPHEDGEEDQENNPLATSILEGISSLKKRRSLTVYPIPVHIKDEPVDEEEYDPKHDESDIDPTLFLERTEEEGSDNMSQKEQHLASLGLKQASNSVNPLNYLADYSFDEEKTNRPSIDKPLEISTTTTEVKEASCRACNLKFSTRANARRHERNLHPHLFSSIGLVNPVSKGLSVVSSMQQGIKTTQAVRSVLKPDQLVLFDYDQPEKYQQLLTDEKILFMQRHEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKVYNSLIDAGVLKKDSLGWSPDKLRAKELLVNKIYECKICSKHFRLKLEFRSHVYEEHADYQKKDVLPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNEVQKSNLMKELSSTTSTESSPSKKSETPQKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTLCLVGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGALPRPDKMIADAYTGRYDYVMKDLMSITNGGTSLNENTNENDEDGNLGDMPAAKKIKLESGAIVAIGTANLKECPICSAVFNNNIGLSNHMRTHTTGDVGAEDDIPEEEDEVAEKKSIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCNAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLLHKKTVHGNESAQADDELPQMMDQSMESTAPLYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECSQCKKIFFDKQMLENHAQSCTKKTSTAVVAGGTSETEVAPSFQHKTGDDDDVPDSQPEATIGDGTTSRKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICNKAFAQMTALKVHRKWHFRGDSKQTPADVNAPKTIRRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLQCTKCDLKFETKKDWIEHKVNEAKIAKPYGPFQWGCEICGTYLSRREKLIHHMLAHIKETNGQLSVEGENYPGESNSQDSESSSHQGASEQRQIDDEDDDEEDEEEEFDGDEDDAEETVDAVNHDDNANDGQNDDDIDQQSELGPRLLPESNDDSNDSSAQSSDSDDSSSDDDEPEPPLHRAEHKTRFPCDLCQVYFESSAELQRHVTSHFLNGPGSVTLTTITKDKPKPLEIHAKDDDDDDEDDDMTEADVVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976744;
90% Identity
iTF_00672356;
80% Identity
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