Eaen019339.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eristalinus aeneus
Gene Symbol
-
Assembly
GCA_955652365.1
Location
OY019133.1:35154423-35164001[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00019 0.027 15.6 3.4 1 23 251 273 251 273 0.98
2 11 0.0012 0.17 13.1 9.5 1 23 279 301 279 301 0.96
3 11 7.4e-05 0.011 16.9 5.5 1 23 307 329 307 329 0.98
4 11 0.00028 0.041 15.0 2.3 1 23 335 357 335 357 0.95
5 11 2.8e-05 0.004 18.2 0.6 1 23 363 385 363 385 0.97
6 11 1.8e-06 0.00026 21.9 0.1 1 23 391 413 391 413 0.98
7 11 9.1e-05 0.013 16.6 1.2 1 23 418 440 418 440 0.96
8 11 0.00011 0.015 16.4 0.0 1 23 446 469 446 469 0.98
9 11 5e-05 0.0072 17.4 0.1 1 23 560 582 560 582 0.97
10 11 0.013 1.8 9.8 3.3 1 23 674 696 674 696 0.96
11 11 0.004 0.58 11.4 4.9 5 23 709 727 701 727 0.92

Sequence Information

Coding Sequence
ATGTGTGCAGCACAGAGTAACCCACAGTCCAGCTACGGCTACACTTGGAACTTCGCAGACAGTTCTCGTGCTGAATCTGTCGTCGAAATATCGCCCAACATAAACTACACAGTCAGCAGCGAATCGatgCCATACCTCTTTACGGATGGCTCGTTGACCCTACAAAAAGACATCAAGGGAACCTTGACAACCAACAAGGGAAGTGTCGTTCGTCGCATGTTCGTAGTGAATGAACCTTTCACTGGCGGTGGTCAAAGGGTGATTGCAACTGGAGCAACTGGAACAACTGTTgttaaaaaacaagaacaacaacaagtgCTGAGTATCAATTGTGATAAAAATTATCTGCTTGTAGATCAGTCAGATCAGTCCCATTCTCTTGGAAATGGAATTGTTGATACGAAGACACAAACGATtctgacaacaacaacagctggCAAAACTCACTATAGCCCAATAGGACCACTACACCTCACCGCTGAGGAATGTAATGAAATCTTAATGAAGCGTGCGCTAGCAGCATCGCAACAAAATCATACCACAATAACGACATCAGATGGGCAGACAGGGGACATTATACCTGGTATGTCAGTTCACGTCCAAAAGGTCATTCAGGGACTGGAAGACACCGAGGACTCACAAGACAATTCGCCCAATTGCAAATTGGAACCTGCTATGGAGATTTCACCAAAAGCAGAACTTCAAGATTCGAATGACCAAACAACCAATCAAACAGTGAAAGAAAGGCCTTATAGTTGCGATGAATGtgggaaatcatttttgttgaaaCACCACTTGACAACTCATGCCAGAGTTCATACAGGAGAACGACCCCACGTGTGTGTTCACTGCGGGAAGAGCTTTGCTCATAAACACTGCTTAAATACACATTTGCTGTTGCATTCAACCGAACGTCCTTATCAATGCGGCGAGTGTAAAAAGAGTTTCACCCTCAAGCACCACCTGCTCACGCATTCAAGAGTGCACAGCCGGGATCGACCATTCGTTTGCCAGGAATGTGGTAGATCTTTCCCTCTAAAGCGACATTTAGTTACACACAGTAAATTTCATGCTGGCGAGCGGCCGTTCGTTTGCGAGGAatgtggtgaaagttttgctcAAGAGAATCATTTAATTATGCATTCACGTTTTCATGGATCTGTTAATCCCTTCGTGTGTCCCGATTGTGGTGTGACTTTCCCGAGAAAATTCCAGCTTGTGAATCACGGAAGAATTCATGGCAAAGTGCCGCATGCCTGCACTGTGTGcggaaaggaatttttgcagaAAAGAACTCTGGTGTCACACATGAGAATACATACTGGCGATCAACCTTATCCGTGTACCGGTTGCGGAGACGGATTTCAGTCGAAGGCCGAACTTAATCAGCATATACGTGTAGCGCATGGCGGAGTGAACCCGAATTCCTCTCACACAACAATTGTTCCAACCAACACAATAGTGACGACGTCAAATCACAATCCAAATCAAATTCAGATCCATCAGCcgcagcaacaacatcatcatcaacagcagcagcagcaacaacaacaacaacagcatcaacagcagcaacaacaagcaCAACCTCAAACAATAACTGTAGTTAGTAATCCGAATAATTCGGCATTATTAACGGTTACATCGAATGACAATAACTCAGGAAATCGACCGCAATTTGCTTGTCGAGAATGTGGGCTTGCCTTTAATAGCAAAGAAGCATTAGCACTGCATTTGCGATTGCATTCTGGTGACAAGAGTTTGATGACAGATTTATGCGCATTAACCGCGGCAATACCTGGCCACTACCTTAACACCACAAATCTAAATCAAGCAACCGTTGTAGCTGCAAATCCAAACATTGTATCCCAAAACGCAGTACCAGTGCAAATTATATCATCAACCGGACAGGTTGTTAGTCAAACGACAATGGTACAAAGCCAGCCCCAACCGCAAACGATTGTAACAGCAGTCCAGGCGGCTGCTCCGCAGCAGCAGAACACAACAAAGCCCAAAAGCCACTTTTGCTCTAGTTGTGGCAAGGGTTTCGCAGCAAAACACGGTTTATTGCAGCATAACAGACGTCATCCCAATGGTGGTTGTACAGTCCGTACGCACGTTTGTGAGTGCGGCAAGGCATTCTTTCAAAAGAATCATCTTATGCTTCATCAGCGTCAGCATTTAGAAACAAAACCCAACATCTCACAACAGCAACAGGATGTAatccaacagcaacaacagcagcagcaacaacaacagcaacagcaacagcagcagcaacaacagcaacaacaacagcaacagcagcagcagcaaaacccagtgcaccaaCAGCAAATATCACAGCAGCAAtcccagcagcaacagcagcaaaaccaGCAGCATCAAACAATGACGACACGAGAAGTTCTCATCGGAAACCAAGCACTCCACGTGCAGGTCTTGCAGGGCTCCAATACAGCCCAGGTTATCAAGTATGAAATAAACATACCGCAGGAAGGCCAGGCGATCGAGTAA
Protein Sequence
MCAAQSNPQSSYGYTWNFADSSRAESVVEISPNINYTVSSESMPYLFTDGSLTLQKDIKGTLTTNKGSVVRRMFVVNEPFTGGGQRVIATGATGTTVVKKQEQQQVLSINCDKNYLLVDQSDQSHSLGNGIVDTKTQTILTTTTAGKTHYSPIGPLHLTAEECNEILMKRALAASQQNHTTITTSDGQTGDIIPGMSVHVQKVIQGLEDTEDSQDNSPNCKLEPAMEISPKAELQDSNDQTTNQTVKERPYSCDECGKSFLLKHHLTTHARVHTGERPHVCVHCGKSFAHKHCLNTHLLLHSTERPYQCGECKKSFTLKHHLLTHSRVHSRDRPFVCQECGRSFPLKRHLVTHSKFHAGERPFVCEECGESFAQENHLIMHSRFHGSVNPFVCPDCGVTFPRKFQLVNHGRIHGKVPHACTVCGKEFLQKRTLVSHMRIHTGDQPYPCTGCGDGFQSKAELNQHIRVAHGGVNPNSSHTTIVPTNTIVTTSNHNPNQIQIHQPQQQHHHQQQQQQQQQQQHQQQQQQAQPQTITVVSNPNNSALLTVTSNDNNSGNRPQFACRECGLAFNSKEALALHLRLHSGDKSLMTDLCALTAAIPGHYLNTTNLNQATVVAANPNIVSQNAVPVQIISSTGQVVSQTTMVQSQPQPQTIVTAVQAAAPQQQNTTKPKSHFCSSCGKGFAAKHGLLQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKPNISQQQQDVIQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNPVHQQQISQQQSQQQQQQNQQHQTMTTREVLIGNQALHVQVLQGSNTAQVIKYEINIPQEGQAIE