Belo029260.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Baccha elongata
Gene Symbol
-
Assembly
GCA_951217065.1
Location
OX578272.1:97953244-97965743[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00025 0.054 15.6 3.4 1 23 249 271 249 271 0.98
2 11 0.0017 0.35 13.0 9.5 1 23 277 299 277 299 0.96
3 11 0.002 0.42 12.8 9.1 1 23 305 327 305 327 0.98
4 11 0.00059 0.13 14.5 1.6 1 23 333 355 333 355 0.95
5 11 2.8e-05 0.006 18.6 0.5 1 23 361 383 361 383 0.97
6 11 2.5e-06 0.00053 21.9 0.1 1 23 389 411 389 411 0.98
7 11 0.00013 0.027 16.6 1.2 1 23 416 438 416 438 0.96
8 11 0.00015 0.032 16.3 0.0 1 23 444 467 444 467 0.98
9 11 9e-05 0.019 17.0 0.4 1 23 614 636 614 636 0.97
10 11 0.012 2.6 10.3 3.4 1 23 728 750 728 750 0.96
11 11 0.0046 0.97 11.7 5.0 5 23 763 781 755 781 0.92

Sequence Information

Coding Sequence
ATGTGTGCAGCGCAAAGTAACCCCCAATCTAGCTACGGCTACACTTGGAACTTCGCAGACAGTTCCCGTGCTGATTCTGTAGTCGAAATATCGCCCAACATTAACTACACAGTCAGCAGCGATGCGatgccATATCTCTTTACCGATGGCTCGTTGACGCTTCAGAAAGATATTAAAGGAACTTTAACAACAAATAAGGGAAGTGTTGTCCGCCGGATGTTTGTGGTCAATGAGCCTTTTACAAGCGGAACTCAAAGagTAATAACAACGGGTGGTGCTTCAACTGTTGTAAAAAAGCAGGAACAGCAGCAGGTGTTAAGCATCAATTGTGATAAGAATTATCTTCTTGTAGACCAGTCAGACCAAAACCATTCTATTGGAAATGGCATTGTtgatacaaaaacacaaactatTCTGACGACAACAACAGCTGGAAAAACGCATTTCAGCCCAATAGGACCACTGCATCTAACAGCCGAAGAATGtaatgaaattttaatgaagCGTGCGCTAGCAGCATCGCAAAATCACACTACGATTACAACTTCCGATGGACAAACGggAGATATTATTCCTGGCATGTCTGTACATGTCCAGAAAGTTATCCAGGGTCTCGAAGATAATGAAGACTCACAAGACAACTCCCCTAATTGCAAATTAGAACCTAATATGGAAATATCCCCAAAAGCAGAGCTTCAGGATTCGAACGACCAGACTATTAATCAAACAGTCAAAGAAAGACCTTATAGCTGTGAAGAATGTgggaaatcatttttattaaaacatcatTTGACTACTCATGCCAGAGTTCATACAGGAGAACGACCTCATGTGTGCGTTCATTGCGGAAAAAGCTTTGCCCATAAACATTGTCTTAACACGCATTTGCTGTTACATTCGACCGAACGTCCGTATCAGTGTTGCGAGTGTAAAAAGAGTTTTACTCTTAAACATCACCTTCTTACACATTCAAGAGTTCACAGCAGAGATCGTCCTTTTGTATGCCAAGAATGTGGTAGAGCATTTCCTCTTAAGAGACATTTAGTGACTCACAGCAAATTTCACGCTGGTGAACGGCCGTATGTTTGTGAAGAATGTGGTGAAAGTTTTGctcaagaaaatcatttaattatGCATTCACgTTTTCATGGATCGGTTAATCCTTTCGTTTGTCCCGATTGCGGCGTAACTTTCCCTAGAAAATTTCAACTGGTTAATCACGGCAGGATTCATGGAAAAGTTCCACATGCTTGCACAGTCTGCGGCAAGGAATTCCTTCAAAAACGCACATTGGTTTCTCATATGAGAATACACACTGGTGACCAACCATATCCGTGCACTGGTTGTGGAGATGGTTTTCAATCTAAGGCGGAACTCAATCAGCATATACGTGTCGCTCATGGTGGAGTAAATCCGAATTCTTCCCATACGACAATTGTTCCAACAAATACTATAGTGACGACCACGAACCATAATCCCAATCAAATTCAGATACATCAGCCgcaacaacatcatcatcaacaacaaacacagcagcaacagcaacaacaacagcaacaacagcagcaacaacagcaacaacaacagcaacaacaacaacaacagcagcagcaacaacagcaacaacaacagcaacaacaacagcaacagcagcaacaacaacaacaacaacaacagcaacaacagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcaacaagcACAACCTCAAACGATAACAGTGGTTAGCAACCCAAACAATTCGGCATTGTTAACCGTAACATCGAATGACAATAACTCAGGAAACAGACCACAATTTGCGTGTCGagaaTGTGGTTGTGCCTTTAATAGTAAAGAAGCATTGGCACTACATTTACGATTGCATACAGGTGACAAAAATTTAATGACCGATTTGTGTGCGTTGACAGCAGCTATACCAGGCCATTATTTGAATACCACTAATCTTAATCAAGcAACCGTTGTCGCTGCAAATCCAAACATTGTGTCCCAAACTGCTGTTCCAGTGCAAATTATATCATCGACTGGTCAAGTTGTTAGTCAAACAACTATGGTGCAAAGTGCACCTCAACCACAAACTATAGTCACTGCAGTGCAGGCGGCTGTTCCCCAACAACAAAACGCTACAAAGCCCAAAAGTCATTTTTGCAACAGCTGTGGAAAAGGATTTGCCGCTAAACACGGTCTATTGCAACATAACCGAAGGCATCCTAATGGTGGTTGTACTATTCGTACCCATGTATGTGATTGCGGCAAGGCTTTCTTCCAGAAAAACCATCTTATGCTTCATCAACGTCAGCATTTAGAAACAAAACCCAGCAATATTTCCCAACAACAACAGAACCAAGTGCAACAGCAGCAAATATcccagcagcagtcacaacagcaacaTCAAACGATGACAAGAGAAGTTCTGATTGGCAATCAGGCACTTCATGTGCAAGTTTTGCAGGGTTCAAACACAGCTCAAGTgattaaatatgaaataaacaTACCACAAGAGGGTCAAACAATTGAGTAA
Protein Sequence
MCAAQSNPQSSYGYTWNFADSSRADSVVEISPNINYTVSSDAMPYLFTDGSLTLQKDIKGTLTTNKGSVVRRMFVVNEPFTSGTQRVITTGGASTVVKKQEQQQVLSINCDKNYLLVDQSDQNHSIGNGIVDTKTQTILTTTTAGKTHFSPIGPLHLTAEECNEILMKRALAASQNHTTITTSDGQTGDIIPGMSVHVQKVIQGLEDNEDSQDNSPNCKLEPNMEISPKAELQDSNDQTINQTVKERPYSCEECGKSFLLKHHLTTHARVHTGERPHVCVHCGKSFAHKHCLNTHLLLHSTERPYQCCECKKSFTLKHHLLTHSRVHSRDRPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSVNPFVCPDCGVTFPRKFQLVNHGRIHGKVPHACTVCGKEFLQKRTLVSHMRIHTGDQPYPCTGCGDGFQSKAELNQHIRVAHGGVNPNSSHTTIVPTNTIVTTTNHNPNQIQIHQPQQHHHQQQTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAQPQTITVVSNPNNSALLTVTSNDNNSGNRPQFACRECGCAFNSKEALALHLRLHTGDKNLMTDLCALTAAIPGHYLNTTNLNQATVVAANPNIVSQTAVPVQIISSTGQVVSQTTMVQSAPQPQTIVTAVQAAVPQQQNATKPKSHFCNSCGKGFAAKHGLLQHNRRHPNGGCTIRTHVCDCGKAFFQKNHLMLHQRQHLETKPSNISQQQQNQVQQQQISQQQSQQQHQTMTREVLIGNQALHVQVLQGSNTAQVIKYEINIPQEGQTIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00671099;
90% Identity
iTF_00984460;
80% Identity
-