Basic Information

Insect: Cheilosia grossa
Gene Symbol: -
Assembly: GCA_963082955.1
Location: OY720148.1:21854022-21863891[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00021 0.021 15.6 3.4 1 23 249 271 249 271 0.98

2 11 0.03 2.9 8.9 9.5 1 23 277 299 277 299 0.93

3 11 0.0017 0.16 12.8 9.1 1 23 305 327 305 327 0.98

4 11 0.00033 0.032 15.0 2.3 1 23 333 355 333 355 0.95

5 11 2.4e-05 0.0023 18.6 0.5 1 23 361 383 361 383 0.97

6 11 2.1e-06 0.00021 22.0 0.1 1 23 389 411 389 411 0.98

7 11 0.00011 0.01 16.6 1.2 1 23 416 438 416 438 0.96

8 11 4.6e-05 0.0046 17.7 0.0 1 23 444 467 444 467 0.98

9 11 7.5e-05 0.0074 17.1 0.4 1 23 586 608 586 608 0.97

10 11 0.019 1.9 9.5 3.4 1 23 700 722 700 722 0.96

11 11 0.0047 0.47 11.4 4.9 5 23 735 753 727 753 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00021	0.021	15.6	3.4	1	23	249	271	249	271	0.98
2	11	0.03	2.9	8.9	9.5	1	23	277	299	277	299	0.93
3	11	0.0017	0.16	12.8	9.1	1	23	305	327	305	327	0.98
4	11	0.00033	0.032	15.0	2.3	1	23	333	355	333	355	0.95
5	11	2.4e-05	0.0023	18.6	0.5	1	23	361	383	361	383	0.97
6	11	2.1e-06	0.00021	22.0	0.1	1	23	389	411	389	411	0.98
7	11	0.00011	0.01	16.6	1.2	1	23	416	438	416	438	0.96
8	11	4.6e-05	0.0046	17.7	0.0	1	23	444	467	444	467	0.98
9	11	7.5e-05	0.0074	17.1	0.4	1	23	586	608	586	608	0.97
10	11	0.019	1.9	9.5	3.4	1	23	700	722	700	722	0.96
11	11	0.0047	0.47	11.4	4.9	5	23	735	753	727	753	0.92

Sequence Information

Coding Sequence: ATGTGTGCAGCACAGAGCAACCCGCAGTCCAGCTATGGATATACTTGGAACTTCGCAGACAGTTCCCGTGCTGAATCTGTCGTAGAAATATCGCCTAGCATAAACTACACAGTCAGCAGCGAGTCGATGCCCTATCTTTTTACGGATGGCCCTTTGACGCTTCAGAAGGACATAAAGGGGACTCTGACAACCAACAAGGGGAGTGTTGTTCGCCGCATGTTTGTAGTGAATGAGCCGTTTACTACAGGCACTCAAAGGGTAATAACTACTGGCGGAGGATCCACAGTGGTAAAGAAACAGGAGCAACAACAAGTGCTGAGCATCAATTGTGATAAGAACTATCTTCTTGTAGACCAATCAGATCAATCTCATTCTATTGGCAATGGGATTGTTGATACAAAAACTCAAACTATCCTGACAACAACAACGGCTGGCAAAACACATTACAGCCCAATAGGACCACTACATTTAACAGCCGAAGAATGtaatgaaattttaatgaagcGTGCTCTAGCAGCATCGCAAAACCACACAACTATCACAACATCCGATGGTCAGACGGGAGATATTATTCCTGGCATGTCCGTACATGTGCAGAAAGTTATCCAGGGCTTGGAAGATACCGAAGACTCACAAGACAATTCTACCAATTGCAAATTGGAGCCTGCTATGGAAATATCACCGAAAACGGAAATGCAAGATTcgAACGACCAGACTTCAAATCAGATCGTTAAAGAAAGACCTTATAGCTGCGAAGAATGTGGGAAATCATTTTTACTGAAGCATCACTTGACCACTCATGCCAGAGTGCACACAGGAGAACGGCCTCATGTATGCATTCATTGTGGGAAGAGTTTTGCCCATAAGCACTGCTTAAATACCCACTTGCTGTTGCATTCGACCGAGCGCCCTTATCAGTGTTGCGAAtgtaaaaaaagttttacaCTAAAACATCACCTTCTCACGCATTCGAGAGTCCACAGCAGAGAACGGCCATTTGTGTGCCAAGAATGTGGTAGATCCTTCCCTCTAAAGAGACACCTAGTTACACATAGTAAATTCCATGCCGGAGAGCGGCCGTATGTGTGCGAAGAATGTGGAGAAAGTTTTGCCCAAGAAAATCATTTAATAATGCATTCACGCTTTCATGGGTCGGTAAATCCTTTTGTTTGTCCCGATTGCGGAGTTACTTTCCCCAGGAAATTCCAACTTGTCAACCATGGTAGAATTCACGGAAAAGTGCCTCATGCCTGTACTGTCTGTGGTAAAGAATTCTTACAAAAACGCACATTGGTTTCTCATATGAGAATACACACCGGTGATCAGCCCTATCCCTGTACTGGCTGCGGCGATGGTTTTCCTTCGAAGGCAGAACTTAATCAGCATATACGTGTAGCTCATGGTGGCGTGAATCCGAACTCTTCCCATACTACAATTGTCCCGACTAATACCATAGTGACGACAACAACACATAACCCGAATCAAATTCAGATCCatcaaccacaacaacaacagcaacagcagcagcatcatcaccaacaacagcaacagcagcaacaacaacagcagcagcagcagcaacaacagcaacagcaacagcaacaacagcaacagcaacagcagcaacaacagcagcagcaacaacaacagcaacaacaagcaCAACCTCAAACGATAACTGTAGTTAGTAATCCAAACAATTCGGCACTACTAACGGTTACATCGAATGATAATAACTCAGGGAATAGGCCACAATTTGCATGTCGAGAGTGCGGCTGTGCGTTTAATAGTAAAGAAGCACTTGCACTGCATTTGCGGCTGCATACAGGTGACAAGAACCTTATGACGGATTTGTGTGCGTTGACAGCAGCAATACCTGGTCACTACTTGAATACCACAAATCTTAACCAAGCAACTGTTGTTGCCGCAAATCCGAACATTGTGTCGCAGCAAGCTGTGCCAGTGCAAATTATATCATCGACCGGTCAAGTTGTAAGTCAGACAACTATGGTACAAAGTGCGCCACAGCCACAAACTATAGTCACAGCAGTGCAGGCGGCTGCTCCTCAACAACAGAATCCAACAAAGCCGAAAAGCCATTTCTGCCAGAGCTGCGGAAAAGGATTTGCTGCCAAACACGGTCTATTGCAGCACAACCGAAGGCATCCAAATGGTGGCTGTACTGTTCGTACTCATGTGTGTGAGTGTGGTAAGGCGTTCTTCCAGAAAAATCATCTTATGCTCCACCAGCGCCAGCATTTAGAAACGAAGCCAAACATTTCGCAGCAACAACAGGATGTAattcaacaacagcaacaaaatcaGGTGCAACAAATAGCGCAGCAACAGACGCAACAAAACCAACAGCATCAAACGATGACAACAAGAGAGGTCCTTATCGGCAATCAGGCACTACATGTGCAAGTTTTGCAGGGTTCAAACACTGCTCAAGTGATTAAATACGAAATAAACATACCGCAGGAGGGCCAAACGATCGAGTAA
Protein Sequence: MCAAQSNPQSSYGYTWNFADSSRAESVVEISPSINYTVSSESMPYLFTDGPLTLQKDIKGTLTTNKGSVVRRMFVVNEPFTTGTQRVITTGGGSTVVKKQEQQQVLSINCDKNYLLVDQSDQSHSIGNGIVDTKTQTILTTTTAGKTHYSPIGPLHLTAEECNEILMKRALAASQNHTTITTSDGQTGDIIPGMSVHVQKVIQGLEDTEDSQDNSTNCKLEPAMEISPKTEMQDSNDQTSNQIVKERPYSCEECGKSFLLKHHLTTHARVHTGERPHVCIHCGKSFAHKHCLNTHLLLHSTERPYQCCECKKSFTLKHHLLTHSRVHSRERPFVCQECGRSFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSVNPFVCPDCGVTFPRKFQLVNHGRIHGKVPHACTVCGKEFLQKRTLVSHMRIHTGDQPYPCTGCGDGFPSKAELNQHIRVAHGGVNPNSSHTTIVPTNTIVTTTTHNPNQIQIHQPQQQQQQQQHHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAQPQTITVVSNPNNSALLTVTSNDNNSGNRPQFACRECGCAFNSKEALALHLRLHTGDKNLMTDLCALTAAIPGHYLNTTNLNQATVVAANPNIVSQQAVPVQIISSTGQVVSQTTMVQSAPQPQTIVTAVQAAAPQQQNPTKPKSHFCQSCGKGFAAKHGLLQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKPNISQQQQDVIQQQQQNQVQQIAQQQTQQNQQHQTMTTREVLIGNQALHVQVLQGSNTAQVIKYEINIPQEGQTIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00671099;
90% Identity: iTF_00984460;
80% Identity: -