Edef019464.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Erannis defoliaria
Gene Symbol
-
Assembly
GCA_905404285.1
Location
FR990074.1:16400491-16402977[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.8e-09 3.1e-06 27.4 0.0 3 39 15 52 13 57 0.90

Sequence Information

Coding Sequence
ATGAGTACCAATAAGAAAAAAAAGCGAAAGAAATGGGATTGTGATAAGATGTTGAAGGCGTACAATGCAGTAAAAAATAAAGAAATGGGCTACTTAAAGGCCTCTCAATTTTTTAACGTCCCAAAGTCAACTTTGGAGCGTTATTGTAAAAGTGTCAATCCTATAACAGAGCTAACCTCTCTGAAAATGGGCCGAAAGCCAACTTTTTCGGAGGAAATGGAAAGTGAGCTTGCAGAGTACTGCATTACAATGGTGTCAAGGTTCTACGGACTGAGAGCCTCTGACATCCGCTCTTTGGCGTTCCAATTGGCTATAAAGAATGGACTGCCACACCAGTTTAATAGAAGCAAGAATACTGCAGGCCGAAAGTGGATGAGAAACTTTCTAAAAAGAAATCCTCGATTGTCTTTTAGGACACCTCAAGCTACATCTGCTAATAGAGCCAAGGGGTTTTCAAAAGAGAAGGTAGACGAATTTAATGATATTTTGGAGAAAGAGTTGCCAAAAATTAATTTCGATCCAACAAAAATCTACAACGTTGATGAGACTGGCGTGACTGTAGTTCAACATAAAATGGAAAAGGTCTTATGCCTGAAAGGACAGAAACAGGTTGGTGGAATTTCGTCGGCGGAGCGGGGAGCTCTCATAACTCTAGTCACGTGTATGAGCGCGTCGGGGGTCTTCGTTCCACCCTTATTCATTTTCCCCAGAGTTAACATGAAGGAAGAGTTAAAAAATGGTGCTCCACCTGGCTCTCAGTTTGCGTGTCACAAATCTGGCTGGATACAAGTCCATATCTTTACACAATGGATTGTTCACTTCATCAAAACTGTCCACCCATCTAAAGAGTGTCCAGACGGCCATTACTCTCATACAAAAAATATTGATGTCATTGACAAATGTCGGGAAAATGGTGTCATTCTGATATGCCTCCCCCCACATTCGTCTCACCGAATGCAGCCCTTGGATGTATCATTTATGAACCCATTCAAGACGTACTATGCCAAAGAAATCGACTCATGGCTAAAAAATCACCCTGGCCGCGTCGTGACTGCATTTCAAGTTGCAGAATTAGTTGGAAAGGCATACATGAGGGCTGCTACACTGGAAGTCGCCGTTAATGGATTCCGTAAAAGCGGAATATTCCCATTCGACCGCAATCATTTCAGAGACCACGACTTCGCTGTACAGGACGGCAACGATGATGACACTAATATGGATGTGGAAACAGCTCCAGTCCTATCTCCAGTTGTATCGCATACGGGCTCACCGACTATCCTGGCAACTACTAGTGCCGTATCAGTGCACTCACCATTACCATTTGATTTCGCTGTACAGGACGGCGACAATGATGACACGAATATGGATGTGGAATCAGCTCCAGTCCCATCTCCAATTGGATCGTATATGGCTGTACAGTACGATGACGCTGAAGACACTGGTATGAATTATGAATTATCTTTAGCTCCAGTCCTATCTCTAATCGCATCGTCTACTGAATCAGCAATGCCCCTAGCGACTACTAGTGCCGTACCTGCGCACTCGCCATTAGCATTTGCTTTAAGCATGCCTTCGTCAAATTCCGGTGCTGATACGCCTTCGCTACCAGTTTCGACTCCTTCAGGTGTCTCGACTCTAGCATCGCTCGCCATGACTGCAGTCCAAAGTATAATCTCATCAGGTCCAGGTGCTGAACCGGCTCCGCTTCCAGTCCTAACCCATAATGAATCAGCTACGGTACCGTCGACATCAAATGCTGAATTACCGGCTCCGCTTCCAGTCCTAGCCCATGAATCAGCTACGGTGCCGTCGACATCAAATGACGAATTACCAGCTCCGCTTCCAGTCCTAACCCATAATGAATCAGCTACGGTGCCGTCGACATCAAATGACGAATTAGTTCATTCTCAAGTCTCGCGCTGTTTAAGGGCTCAAGCCAGACGAAAATTTTCCATAAAACCGGCTGAAATCAGTCCTTTTTCCACAATCCAGCGAAAAACCAAGAAACCTGATCAAGTATCACAGCTCCGAGGAGGAAAGCCTTTATTAGTCACCAGTTCACCATACAAAAACGAATTACAGGAACAACTAAATAAGACGCAAGAAAAACCAGGAACATCTAAAAGTAATAAGAAAAAAGCGATGCTTGCTAAAAAGAAATCTAAGACTGTTCAAAAAAGCAAAACCATAAAGAAAAACAAGAAGATTACAAAAAAAAATGAAAAAAGGAAGATATCAGTAAAGAAGAAGATTTTACAAAGTAGCTCATCTAGTGAGAGTGCCGATGAAGAGCCATCACTGATGAGCTCAGATGAAAGCGAATGTAATGAAGACGTTGAATGCATATATTGCCTAACTGAATATTCAAATGACATTGCTGGAGAAAAGTGGATACAGTGCACAAAATGTTTTCGGTGGTGTCACGAGTTGTGTGCTGGTGTAGAACCGCATATCAAAAACTTCAATTGTGATCTTTGCCGAGATTAG
Protein Sequence
MSTNKKKKRKKWDCDKMLKAYNAVKNKEMGYLKASQFFNVPKSTLERYCKSVNPITELTSLKMGRKPTFSEEMESELAEYCITMVSRFYGLRASDIRSLAFQLAIKNGLPHQFNRSKNTAGRKWMRNFLKRNPRLSFRTPQATSANRAKGFSKEKVDEFNDILEKELPKINFDPTKIYNVDETGVTVVQHKMEKVLCLKGQKQVGGISSAERGALITLVTCMSASGVFVPPLFIFPRVNMKEELKNGAPPGSQFACHKSGWIQVHIFTQWIVHFIKTVHPSKECPDGHYSHTKNIDVIDKCRENGVILICLPPHSSHRMQPLDVSFMNPFKTYYAKEIDSWLKNHPGRVVTAFQVAELVGKAYMRAATLEVAVNGFRKSGIFPFDRNHFRDHDFAVQDGNDDDTNMDVETAPVLSPVVSHTGSPTILATTSAVSVHSPLPFDFAVQDGDNDDTNMDVESAPVPSPIGSYMAVQYDDAEDTGMNYELSLAPVLSLIASSTESAMPLATTSAVPAHSPLAFALSMPSSNSGADTPSLPVSTPSGVSTLASLAMTAVQSIISSGPGAEPAPLPVLTHNESATVPSTSNAELPAPLPVLAHESATVPSTSNDELPAPLPVLTHNESATVPSTSNDELVHSQVSRCLRAQARRKFSIKPAEISPFSTIQRKTKKPDQVSQLRGGKPLLVTSSPYKNELQEQLNKTQEKPGTSKSNKKKAMLAKKKSKTVQKSKTIKKNKKITKKNEKRKISVKKKILQSSSSSESADEEPSLMSSDESECNEDVECIYCLTEYSNDIAGEKWIQCTKCFRWCHELCAGVEPHIKNFNCDLCRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01192618;
90% Identity
iTF_00649956; iTF_00649954; iTF_00649955; iTF_00649957; iTF_00666462; iTF_00666463; iTF_01440967; iTF_01192618; iTF_01440963; iTF_01440964; iTF_01440965; iTF_01076424; iTF_01076394; iTF_01440972; iTF_01439856; iTF_01439857; iTF_00363961;
80% Identity
-