Eeli017812.1
Basic Information
- Insect
- Epistrophe eligans
- Gene Symbol
- grau
- Assembly
- GCA_951394125.1
- Location
- OX596030.1:70286385-70290313[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.16 14 6.9 0.2 2 23 124 146 123 146 0.93 2 18 0.00034 0.032 15.2 3.7 1 23 178 201 178 201 0.98 3 18 0.032 3 9.0 0.4 1 23 209 231 209 231 0.97 4 18 3.8e-07 3.6e-05 24.5 0.8 1 23 239 262 239 262 0.97 5 18 0.0003 0.028 15.4 1.2 3 23 270 290 269 290 0.96 6 18 0.2 19 6.5 0.4 2 23 299 321 298 321 0.94 7 18 1.4e-05 0.0013 19.5 1.3 1 23 326 349 326 349 0.95 8 18 8e-05 0.0074 17.2 1.5 1 23 355 377 355 377 0.98 9 18 0.0012 0.11 13.5 1.6 1 20 383 402 383 403 0.97 10 18 0.0087 0.81 10.8 0.6 2 23 543 565 542 565 0.95 11 18 4.8e-05 0.0045 17.9 2.3 1 23 597 620 597 620 0.90 12 18 0.0017 0.16 13.0 4.4 1 23 628 650 628 650 0.94 13 18 1.6e-05 0.0015 19.4 0.7 1 23 655 678 655 678 0.96 14 18 0.4 37 5.5 0.1 3 23 686 706 685 706 0.95 15 18 0.031 2.9 9.1 1.0 2 23 715 737 714 737 0.95 16 18 0.00019 0.018 16.0 1.7 1 23 742 765 742 765 0.95 17 18 0.00021 0.02 15.8 3.0 1 23 771 793 771 793 0.97 18 18 0.0016 0.15 13.1 5.3 1 23 799 822 799 822 0.98
Sequence Information
- Coding Sequence
- ATGCCTTTTCTGGAGGAAGACAttttaaaagtggaaaataaCTCCGATGAAGAAAATACTGCACCAAAACCATCAACCTCTGATTCCCCTAACATAAAAGATTCTATTCCAACACGAAGGCTTAGAGAAAAAAGGAAGACAACAGTtaaggaaacaaatgaaaagtCTGAAACAACtgaagaagaagaggaagaaaaaGAGCCTAAAAGCAAAAGAGTTGCCACAAATGCAAAAAGGAAATGTGATCGAGCCAAAAAGGATAAACAGAATATCCCGGAGGCAAATAAAACCGGAAGAGCGAAGAAGCTTTCGAGAGCTATGCTACTCTCCAGGGAACAAGATGCAATCATCAAAAAGTATATGAAACTGTCGTGTGATATTTGCTCGATTGACCTTTCTGATTTCAATGATTTGCaaaatcattttcgattcaTTCACAACCGCACAGGATATGCtgtttgttgcaaaaaaaaacttaaaaatcgtGGCCTAACTGTAGATCATATCAACGCGCATAACAACCCTGATtatttcaaatgCACAGAATGTGGCAAAGTAATGTCTGATAGATTTTGCATGCAAAGACATATGCTTACGTTTCACCCAACCGAAGAACTGAAAACGTTTCAATGTTCGTACTGTCCTGAAAAAATGGCCTCGCAATATCTACTAGATCTGCATACCATAAAACATGTTCCAGAGGATAAATGCACCTTTATTTGTAAAGAATGTGGAAAGGGATTCCCAACAAACTCAACTCTGAATAGTCATATAAAACGGAAACATTCAACAGCATACGATAGAATGTGCGAAATCTGCGCTAAACTATTTCGGCATAAATCAGCTTTTGAGCGGCATATGGAAGAGCATGAGGGTATTGTTCATCCTCAAGTACAATGTACGGAATGTGGTTCATGGTTGAAAGACATACAAAGTCTTCGCAAACACATGAATAATAAGCATGATGAAAAAACACATATCTGTAATATTTGTGGCAAAAATTCAACCTCCAAGAGTGCTCTTCAAAGTCACATAAAATATATGCATGAAATAACGCCTATCTTTAAATGCtcattttgtgaaaaatcttttaaaaaggcTATTAAACTTAAGGAACACGTTGCAACTCACACTGGAGAAGTTCTCTACACATGCCCGCATTGCCCAACAAAGTTCAATGCTAAGTCTAATATGCATTCTCATCaaGGAGATTACGATAAAGTGGACATACTACAATGTCTGGatgaagaaatattaaaagtttcATTACTAATTGGAGAAGAGAAACAAGAATCCATACCGGCAGCAAATGACTTTCCTGAAACAGACACATCTATTGCCACACGAAGAGTTACCCGGCAGTCAACTTTAAAAAACTCAGAACACGCTAGAGCTccagaaataataaaagaaaaaagaaaacgatctaaaatgaaagaaattaaagaGCATGAGACTTCTGAAGATGAATTAGAAAGTCCTTATAATGCTAAAAGAAAAGCCAGTCGACCAAAGAAaggtgaacaaaaaaatcaagagGACAAAGAAGGCAGATCtgaaaagttcttaaaaaatatgaaaactacAAAAGAAAATGATGAATTTATTCAGAAACATATGAAACTATCCTGCGATATTTGTTCCACTAATTTTCCTGACTTTACGAAGCTGAAATATCATTTTCGAGTAGTTCATCAACGCAGGGGATATGTTGTATGTTGCAATAGACAACTGAAAAAACGTGGACTGATTGTAGATCATATTTACGTGCATAACGATCCTGAGTATttcaaATGCACTGAATGTGGCAAGGTGCTGTCCGATAGATCCTGCTTGCAAAGacacaatattttgtttcacCAAGCTGAAGAACTTAAAACGTTTAAATGTAGTCATTGTCCTAAAAAATTTCCCACACAAAAACTGCTCGATTTGCATACTGTTCATCATAATGAATGCACTTTCATGTGTAGCGAATGTGGAAAAGGttttccAACAAAATCAACTATGAATGTCCATTTTAAACGAATCCACTCGACGTTGTGCGACAGAATGTGTGAAATCTGCGCCAAACTTATTAAAGGCAAAACAGCTTTTGAGCGTCACATGGAAGAGCACGAGGGTATTGTCCAGCCTAGGGTACAATGCAAGGAATGTGGTTCATGGTTGAAGGATAAGAACAGCCTTCGAAAGCACATGTACAGTAAACATGATGGTAAATCTCACGACTGCAAAATTTGTGGCAAAAAAACTCCGTCATATAGTGCTCTGTATAGTCACATGAAATATATGCATGAGTTATCAGCTATGTTTCACTGCACATTTTGTGATAAGTCATTTAAAAAGGCTATTAAACTGAAGgaacaCGTGGCAACACACACTGGAGGATTTCTCTACACATGCCCACATTGTCCTACAACGTTTAATGCAAAGACAAATATGCACTCTCACCGTAAGAAAATGCATCGAGAAGAATGGGAGGCAAATAGGCGTTATGCCAAAAAAGCACCAACTGACGAAGAAGCAATCTCAAACATAAAAGATTcagatataaatatttctaagtGA
- Protein Sequence
- MPFLEEDILKVENNSDEENTAPKPSTSDSPNIKDSIPTRRLREKRKTTVKETNEKSETTEEEEEEKEPKSKRVATNAKRKCDRAKKDKQNIPEANKTGRAKKLSRAMLLSREQDAIIKKYMKLSCDICSIDLSDFNDLQNHFRFIHNRTGYAVCCKKKLKNRGLTVDHINAHNNPDYFKCTECGKVMSDRFCMQRHMLTFHPTEELKTFQCSYCPEKMASQYLLDLHTIKHVPEDKCTFICKECGKGFPTNSTLNSHIKRKHSTAYDRMCEICAKLFRHKSAFERHMEEHEGIVHPQVQCTECGSWLKDIQSLRKHMNNKHDEKTHICNICGKNSTSKSALQSHIKYMHEITPIFKCSFCEKSFKKAIKLKEHVATHTGEVLYTCPHCPTKFNAKSNMHSHQGDYDKVDILQCLDEEILKVSLLIGEEKQESIPAANDFPETDTSIATRRVTRQSTLKNSEHARAPEIIKEKRKRSKMKEIKEHETSEDELESPYNAKRKASRPKKGEQKNQEDKEGRSEKFLKNMKTTKENDEFIQKHMKLSCDICSTNFPDFTKLKYHFRVVHQRRGYVVCCNRQLKKRGLIVDHIYVHNDPEYFKCTECGKVLSDRSCLQRHNILFHQAEELKTFKCSHCPKKFPTQKLLDLHTVHHNECTFMCSECGKGFPTKSTMNVHFKRIHSTLCDRMCEICAKLIKGKTAFERHMEEHEGIVQPRVQCKECGSWLKDKNSLRKHMYSKHDGKSHDCKICGKKTPSYSALYSHMKYMHELSAMFHCTFCDKSFKKAIKLKEHVATHTGGFLYTCPHCPTTFNAKTNMHSHRKKMHREEWEANRRYAKKAPTDEEAISNIKDSDINISK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00335295; iTF_00665055; iTF_00974975;
- 90% Identity
- -
- 80% Identity
- -