Cfes017098.1
Basic Information
- Insect
- Chrysotoxum festivum
- Gene Symbol
- grau
- Assembly
- GCA_963931855.1
- Location
- OZ007554.1:194013588-194021780[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.3 80 5.8 0.1 2 23 242 264 241 264 0.93 2 18 0.00063 0.17 14.2 2.7 1 23 296 319 296 319 0.98 3 18 0.013 3.5 10.0 0.3 1 23 327 349 327 349 0.96 4 18 4e-07 0.0001 24.3 0.8 1 23 357 380 357 380 0.97 5 18 0.00031 0.081 15.2 1.2 3 23 388 408 387 408 0.96 6 18 0.21 54 6.3 0.4 2 23 417 439 416 439 0.94 7 18 1.5e-05 0.0039 19.3 1.3 1 23 444 467 444 467 0.95 8 18 8.2e-05 0.022 17.0 1.5 1 23 473 495 473 495 0.98 9 18 0.00098 0.26 13.6 5.5 1 23 501 524 501 524 0.98 10 18 0.014 3.7 9.9 2.7 2 23 681 703 680 703 0.95 11 18 5e-05 0.013 17.7 2.3 1 23 735 758 735 758 0.90 12 18 0.00036 0.094 15.0 3.7 1 23 766 788 766 788 0.96 13 18 1.6e-05 0.0043 19.2 0.7 1 23 793 816 793 816 0.96 14 18 0.42 1.1e+02 5.3 0.1 3 23 824 844 823 844 0.95 15 18 0.032 8.4 8.8 1.0 2 23 853 875 852 875 0.95 16 18 0.00027 0.072 15.3 1.8 1 23 880 903 880 903 0.95 17 18 0.00022 0.058 15.6 3.0 1 23 909 931 909 931 0.97 18 18 0.0016 0.42 12.9 5.3 1 23 937 960 937 960 0.98
Sequence Information
- Coding Sequence
- ATGGTTTGTAGATTGTGTTTAACTAAAGACCATGAAGAAAGTATTGTAATATTTAGTgaagaaaaaatccagaagtaTATTACAAAATTCCTGCAATTGGAGCTATCACCAGATGATCCAGTTTCCAAAGTAATATGTCCTAATTGTTGGCAGCAATTGGATAGTTTTCAAAAGTTCTGCCTTCAAATAGAGGAAGCCCAAAAATCACTTCAATCACTAGCAGACGACTCAATTCCAGAAACTCGAAAAGATTTTGTTAAAGAATTAAGTCCTGTTAAAGAAGAAGATCCAGCGGAAGAATCTAAtgagGATGCGTGCGATAACGACAATACACTGTCCTTTATGGATGAAGACAATTTTAAAGAGGAACTCAACTCCGACGAAGAAAATAAGGCACCAAAACCTGTAGCCTCTAATTCCAATTCATCCGATACAAAAGAATCTATTCCAACACGAAGGTTAagagaaaaaaggaaaataactGCAAAGGAAACAAATGAAAAGTCTGCAACGACTGAAGAAGAGGAAGAAGGAGAAGACGAAAAAGAAGAACAGCCTAAAAAGAAAAGAGTGGTTCCAAATGCAAAGAGAAAATCTGACCAAGCCAAAAAGGATGAACAAAATAACCCAGAGCTAAACAAAACTGGCAGGACAAAAAAGCTTTCGAGAGCTATGCTGCTCTCCAGGGAGCAGGATGCAATCATCAAGAAGTATATGAAACTAACTTGCGATATTTGCTCGATTGACCTTGCTGAtttcaatgatttgcaaaatcATTTTCGCTTCATTCACAACCGTACAGGATATGCTGTATGTtgtaaaaaaaagcttaaaaatcgtGGACTAACTGTAGATCATATCAACGCGCATAACAACCCTGactattttaaATGCGCAGAATGTGGTAAAGTTATGTCGGATAGATTTTGCATGCAAAGACACATGCTTACGTTTCATCCAACCGACgaattgaaaacatttcaatGTTCTTATTGCCCTGAAAAACTGGCCTCCCAATATCTACTAGATCTACATAGTATAAAACATGTTCCAGAGGATAAGTGCACTTTCATTTGTAAGGAATGTGGAAAGGGATTCCCAACAAATTCAACTCTGAATAGTCATATAAAACGGAAACATTCGACAGCATACGACAGAATGTGCGAAATCTGCGCCAAACTGTTTCGGCATAAATCAGCTTTTGAGCGTCACATGGAAGAGCATAATGGTATTGTTCATCCACAAGTACAATGCACGGAATGTGGTTCATGGTTGAAAGACATACAGAGCCTTCGAAAACACATGAATAATAAACATGATGAAAAAACACATATCTGTAATATTTGTGGCAAAAATTCAACCTCCAAGAGTGCTCTTCAAAGCCACATTAAATATATGCACGAGATAACGCCTATATTTAAATGCTCATTTTgtgaaaaatcatttaaaaaggcTATTAAACTGAAGGAACACGTGGCAACTCACACTGGAGAAGTTCTCTACACATGCCCGCATTGTCCAACAAAGTTTAATGCTAAGTCCAATATGCATTCGCATCGTAAGAAAATGCATCGTGAAGAATGGGAGGCAAATCGGCAAGATGCTTACGATAGCGTTGATATACTACACTGTCTCGATGAAGAAATACTTAACGTTGCATTGataattgaagaagaaaaaaatgaatcaCTGCCGACAACAACAGACTCATCTGAAACCAACAAACCTATTTCAACGCGAAGAGTTACCCGAGGTTCAGCTTTGAAGAACTCAGATCACACCAGCCCTCCAGaagtattcaaagaaaaaagaaagaaatcgaAAAAGAAAGCAATTGAAGAGAATGAGTCTTCTGAAGCCGAAGTAGAAAGTCCTTATGATTCAAGTATTGAGCAAAATGCTAAAGGAAGACCCAGTCGATCcaagaaagttaaaaaacaaagcaaagaaGAGGATAAGGAAAGCAGATCGGAAAAGTtcttgaaaaatatgaaaactacAAAAGAAAACGATGCATTCATTCAGAAGCATATGAAACTATCGTGCGATATTTGTTCCATACATTTTCCCGACTTTACGAAATTGAAACATCATTTTCGTGTAGTTCATCAACGCCGGGGATATGTTGTATGTTGCAATAGACAACTGAAAAAACGTGGCCTAATCGTTGATCATATTTATGTGCACAACGATCCTGAGTATTTCAAATGCACGGAGTGTGGTAAAGTTTTGTCTGATAGATCTTGCCTGCAAAGACACAATATTCTCTTCCATCAAGCCGAAGAACTAAAAACGTTTAAATGCACTCATTGCCCTAAAAAATTCCCCACACAAAAATTGCTCGATCTGCATATTGTTCATCACAATGAATGCACTTTCATGTGTAGCGAATGTGGAAAAGGATTCCCAACAAAATCAACTATGAATGTCCATTTTAAACGAATCCACTCGACATTGTGTGACAGAATGTGTGAAATCTGCGCTAAACTTATTAAAGGCAAAACAGCTTTTGAGCGTCACATGGAAGAGCATGAAGGTATAGTGCAGCCGAGAGTGCAATGCAAGGAATGTGGTTCATGGTTGAAAGATAAGAACAGTCTTCGAAAGCATATGTACAGCAAACATGATGGTAAAACACACAACTGCAAAATTTGTGGCAAAAATACACCGTCATATAGTGCTCTGTATAGTCACATGAAATATATGCATGAATTGTCGGCAATGTTTCATTGCACATTTTGTGACAAGTCATTTAAAAAGGCTATTAAACTGAAGgaACATGTTGCAACACACACTGGAGGATTTCTCTACACATGCCCACATTGTCCAACAACGTTTAATGCAAAAACCAATATGCATTCTCACCGAAAAAAAATGCATCCCGAGGAATGGGAGGCAAATAGGCGTTATGCCAAAAAAGCGCCAACTGACGAAGCAAGCTCAAACACAAAAATGGATGTTTCGAAGTGA
- Protein Sequence
- MVCRLCLTKDHEESIVIFSEEKIQKYITKFLQLELSPDDPVSKVICPNCWQQLDSFQKFCLQIEEAQKSLQSLADDSIPETRKDFVKELSPVKEEDPAEESNEDACDNDNTLSFMDEDNFKEELNSDEENKAPKPVASNSNSSDTKESIPTRRLREKRKITAKETNEKSATTEEEEEGEDEKEEQPKKKRVVPNAKRKSDQAKKDEQNNPELNKTGRTKKLSRAMLLSREQDAIIKKYMKLTCDICSIDLADFNDLQNHFRFIHNRTGYAVCCKKKLKNRGLTVDHINAHNNPDYFKCAECGKVMSDRFCMQRHMLTFHPTDELKTFQCSYCPEKLASQYLLDLHSIKHVPEDKCTFICKECGKGFPTNSTLNSHIKRKHSTAYDRMCEICAKLFRHKSAFERHMEEHNGIVHPQVQCTECGSWLKDIQSLRKHMNNKHDEKTHICNICGKNSTSKSALQSHIKYMHEITPIFKCSFCEKSFKKAIKLKEHVATHTGEVLYTCPHCPTKFNAKSNMHSHRKKMHREEWEANRQDAYDSVDILHCLDEEILNVALIIEEEKNESLPTTTDSSETNKPISTRRVTRGSALKNSDHTSPPEVFKEKRKKSKKKAIEENESSEAEVESPYDSSIEQNAKGRPSRSKKVKKQSKEEDKESRSEKFLKNMKTTKENDAFIQKHMKLSCDICSIHFPDFTKLKHHFRVVHQRRGYVVCCNRQLKKRGLIVDHIYVHNDPEYFKCTECGKVLSDRSCLQRHNILFHQAEELKTFKCTHCPKKFPTQKLLDLHIVHHNECTFMCSECGKGFPTKSTMNVHFKRIHSTLCDRMCEICAKLIKGKTAFERHMEEHEGIVQPRVQCKECGSWLKDKNSLRKHMYSKHDGKTHNCKICGKNTPSYSALYSHMKYMHELSAMFHCTFCDKSFKKAIKLKEHVATHTGGFLYTCPHCPTTFNAKTNMHSHRKKMHPEEWEANRRYAKKAPTDEASSNTKMDVSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00664274;
- 90% Identity
- -
- 80% Identity
- -