Echr005215.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epirrita christyi
Gene Symbol
PAXBP1
Assembly
GCA_951392215.1
Location
OX595837.1:15296537-15308888[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-14 3e-10 40.9 0.2 2 190 516 683 515 693 0.69

Sequence Information

Coding Sequence
ATGTTTCGTAAGCCGAAGAAAATCCAAAGGCGTGTGTTCtgtgctgatgacgatgacgacgcTGAGCCGGAGCCCCCACCCCCGCCTATCATCAGCCAGGAGTCTTTGGAGAAGGAAAAAAGAGAAAAGAAGGAGAACAAGCCTGTGAAGAGTGTGGCACTCCTCAGTTTCGCTGATGAAGAGGAAGAATGTGAAGAGTTCAAAGTGAAGAAGTCATCCCAGAGCAAGCGCCTGTCCAAGCGCAGAGATAAGGATCGAAAGAGATTGCCTGATGGTGATAGTAACAAATATGACAGTAACGGTCATGAGGAAAACTTCAACCAAATAGAAAAGGAAACGAATAACGCGCCCGTTAAGCCTAAGAAGAAAGTGACCCTAGAGGGGCTGATTCTATCTGGTCGAGAGGCACTAGCTGCAGATGGAACCGGGGATGTATCGGAAGACGACGGGGAGGGGGAGGAGGACGATAGGGGGTTCCACCGGTACCGCGCCGAGTCGGTCAGGGCGGCGCTGGCGGGCGCGCCGGGGCACATTCCCGACGCGGCGCTAATCCATGCCGCACGCAAGACCAGACAGCAGGCTCGCGAGCTCGGCGACTTCGTGCCGATTCAATCCTCGCCTGTGGCTGGCTCGCGGTTGGTAAGAGAAGGAGATGActctgctgatgatgaggagGACCGCATACAAGTGAGGGGGCTGGAGATGCCCAGCGATAAGCCGCAGCGCGGCACCGCAGCCATCGATCCGGATGACGAAAACAACAGCGAGCTCGAGGAGTGGGAGGAGCAGCAGATGCAGAAAGCCATGCCAGCCATTGTTGATATTACAGGTGAATGTCCAATAGAGCTGAACCCATTTGCAGTAGTTCCGCCGCCACCGCGCATGCCCATGGCCCCGCACTTGCGCCCACTAGCAGTCGTGGGGGCCTCCATGCCGCCTGGTTCGGCACAGCAACTTGTAGCGGCCCTCACCGAGCGGTTAGAAGAGCTCCAACTAGACAGAATCAACACGGCGAACAAACGCGAACAGCTACAGACCCAGCTGCTGAACGTCGCGCGGATCAGGGAGATACGTGCGGCGCGACGTGGTGAACTGGACGCGGCGTACCGGCGAGCGCAGACCGCGCGGGGCTACCTTACCGATCTCATCGAGTGTCTTGATGAGAAGATGCCGCAGTTAGAAGCGTTGGAGAGTCGCGCGTTGGCGTTGCAGCGGAGACGACACGACTTCCTTGTGGAGCGACGCCGCGCGGACGTCAGGGACCAGGCGCAGGATGTACTGGCTTTAGCAGCTCGTCCGGGAACCATTCGGCAGGCGGACGGTCCAGAGAAAATTCGACGGACAGCGGAGCGCGAGGGGCGGAGACGCGCCCGCCGATTGAAGCGTGAATCGGCGCCGGGAGCGCCGCGCGCGCACCGCGACGGAGACTCCAGCGACGACGAGCTGCCGCCAGCGGAGCACCACCATGCAGTCACAGAGAGAGATAGCATCAGACAGGCGGCCGGCGCCCTGTTCGCGGACGCGCTGGAGGCCTGGCGCGGGGTGCAGGGCGTGTGCGCGCGGCTAGCAGCGTGGCGACGCAGAGACCTAGCAGCCTACAGCGACTCACACCTTCCCGCCGCGCTGCCTAAGTTATTGGCACCATATGTGCGACACCAGCTCATATTGTGGAACCCGCTGGCTGACGAAGACAATGAGGACTATGAGAAAATGGAGTGGTACAAATGTCTGATGATGTACGGCGTGCGGGTGGAGCGTGCGGAGGGGTCGTCAGAGTCGGAGGACGAGGGCCCGCCCGCACTCGCGCCTCTCAGCGAGGCTGCCGCGCGGGATGACCCCGACCTCATGCTGGTACCCACGATGTTGAATAAGGTTGTACTGCCTAAGATTACAGAACTTATCGAGCAGTCATGGGATCCGATGTGCGTGCGTGCCTGCGTAAGACTGCGTCACGTGACGGTGCGCGCCGCGTCGGTGCCGGGTGCGAGCCGCCCGCTTCGCCGCCTTGCCGCTGCCGTCGCGGGGAAACTAGCCGCCACGCTGCACGCCGACGTGTTCCTACCCGCACTACCTCCTATAGTAATGGAAGGTGCCGGCGGCGCTTTCTGGCGGCGCTGCGTGGGCGCGGGCGTGCGGCTGCTGCGCGGCTCGCTCGCGCTCACATCTCCGCCCGCGCTACTGAGGAACGATGACAACGTCCTCGCCCTTATAGAAACGCTAAGTTTTGCAGCGGGAGCCGCGCCCGGACCGTTTATAACGTCGGCCGCCGTGGCCCTCGCCGAGACCCTGCCGCGGACCGGGAACCTGCGCCGCGCGGCGCTGACGCGTCTCGCGCGGCTCGCGACACTAGCGCTCTCGCGGCTCGACGGAGACAACCCGCTGCACCTGAAAGCTATCGAGCAAGCGCGGGCCGTGTTAGCGGAAGCAAAAGCGATGGAATGA
Protein Sequence
MFRKPKKIQRRVFCADDDDDAEPEPPPPPIISQESLEKEKREKKENKPVKSVALLSFADEEEECEEFKVKKSSQSKRLSKRRDKDRKRLPDGDSNKYDSNGHEENFNQIEKETNNAPVKPKKKVTLEGLILSGREALAADGTGDVSEDDGEGEEDDRGFHRYRAESVRAALAGAPGHIPDAALIHAARKTRQQARELGDFVPIQSSPVAGSRLVREGDDSADDEEDRIQVRGLEMPSDKPQRGTAAIDPDDENNSELEEWEEQQMQKAMPAIVDITGECPIELNPFAVVPPPPRMPMAPHLRPLAVVGASMPPGSAQQLVAALTERLEELQLDRINTANKREQLQTQLLNVARIREIRAARRGELDAAYRRAQTARGYLTDLIECLDEKMPQLEALESRALALQRRRHDFLVERRRADVRDQAQDVLALAARPGTIRQADGPEKIRRTAEREGRRRARRLKRESAPGAPRAHRDGDSSDDELPPAEHHHAVTERDSIRQAAGALFADALEAWRGVQGVCARLAAWRRRDLAAYSDSHLPAALPKLLAPYVRHQLILWNPLADEDNEDYEKMEWYKCLMMYGVRVERAEGSSESEDEGPPALAPLSEAAARDDPDLMLVPTMLNKVVLPKITELIEQSWDPMCVRACVRLRHVTVRAASVPGASRPLRRLAAAVAGKLAATLHADVFLPALPPIVMEGAGGAFWRRCVGAGVRLLRGSLALTSPPALLRNDDNVLALIETLSFAAGAAPGPFITSAAVALAETLPRTGNLRRAALTRLARLATLALSRLDGDNPLHLKAIEQARAVLAEAKAME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01182913; iTF_00377124; iTF_01335953; iTF_01509623; iTF_00737497; iTF_00318110; iTF_01171486; iTF_01170616; iTF_00909727;
90% Identity
-
80% Identity
-