Basic Information

Insect: Perizoma affinitatum
Gene Symbol: Paxbp1_1
Assembly: GCA_961405105.1
Location: OY560192.1:11986605-11997186[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.5e-16 5.7e-12 46.3 0.4 5 190 523 688 520 697 0.68

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.5e-16	5.7e-12	46.3	0.4	5	190	523	688	520	697	0.68

Sequence Information

Coding Sequence: ATGTTTCGCAAACCGAAAAAGATCCAAAGACGCGTGTTCTGTGCTGATGACGATGACGACGGTGAACCCGAAGCCCCGCCGCCGCCTATCATCAGCCTGGACACTCTGGAGAAAAAGGAAAATATAGAAAAGAAGGAGAATAAGCCTGTGAAGAGTGTGGCGCTACTTAGTTTCGCTGATGAAGATGAAGAATGCGAGGAGTTCAAAGTGAAGAAATCATCCCAGAGCAAGAGACTGTCGAAGCGCAGAGTTAAGGAAAGAAAGAAATTGCCTGATGGTGATAGTAACACTTATGACAGTAACGGCCATGAGGAAAACAACTCAAACCATTTAGAAAAAGAAGCCATATCAATCAAGCCGAAGAAAAAAGTGACTCTAGAGGGGTTGATTCTGTCCGGGCGCGATGCGCTCGCGGCGGACGGGGCAGGGGACGTATCAGACGAGGAACCCTCCCCCGGGGAGGAGGGCGAAGAGAATAGGGGGTTCCACCGGTACCGCGCGGAGTCAGTCAGGGCGGCGCTGGCGGGCGCCCCGGGTCACATCCCCGACGCCGCGCTTATTCACGCCGCGCGCAAGACCAGACAGCAGGCGCGCGAGCTGGGTGACTTCGTGCCGATACAGTCTGAGCCGGTGAGCGGGTCTCGGCTCGTGAGGGAGGGTGACGGAGACGACTCGGCTGACGACGAGGAGGACCGCATAGAAGTGAGGGGGCTGGACATGCCCAGCGACAAACCGCAACGCGGTACCGCGGCAATCGACCCTGAGGAGGAAGATAACAGCGAGGTCGAGTGGGTGGAACAGCAGATGCAGAAAGCCATGCCGACTATAATTGACGTTACAGGTGATTGTGCAGTGGAGTTGAATCCATTCGCAGTGGCGCCTCCGCCCCCGCGCATGCCCATGGCGCCACACCTGCGCCCGCTGGTGGCCGCGGGCGCCTCGCAGCCGCCCGGCTCGGCGCAACAACTCGTCACCTCCCTAACCGAGCGGTTGGAAGAGCTCCAACTGGACAGGATCAACACCGGCAACAAGCGGGAGGCGCTCCAGAAGCAACTGCTGAATCTCGCGCAGATCCGCGAGAGCCGCGCGGCGCGACGCGCTCAGCTGGACGCGGCGTACAGGCGCGCGCAGACCGCGCGGGGGTACCTCACCGACCTCATCGAGTGTCTGGACGAGAAGATGCCGCAGCTGGAAGCATTGGAGAGTCGAGCGTTGGCCATGCACCGACGGCGCCACGAGTTCCTGGTGGAGCGGCGCCGAGCTGACGTCAGGGACCAGGCGCAGGACGTACTCTCCATAGCAGCTCGACCGGGTTCAGTGAAGCAGCCGGATGGACCGGAGAAGGTTCGACGCACAGCGGAGCGCGAGGGGCGGAGGCGCGCGCGGCGGCTGAAGCGGGAGGCGGCGCCCGGGGCTCCGCGCCTGCACCGCGACGGAGACTCCAGCGACGACGAGCTGCCGCCAGCGGAGCACCACTACGCAATCACTGAACGAGACGGTATCCGCGCGCAGTCGAGCTTGCTGTTTGCGGACGCGCTGGAGGCGTggcgcggcgcgggcggggTGTGCGCGCGACTCGCCGCGTGGCGCCGTCGGGACCCCGCCACCTACAACGACGCGCAGCTGCCCGCCGCACTGCCCAAGCTGCTGGCGCCCTACGTCCGGCATCAGctAATATTATGGAACCCTCTGGCCGACGAAGACAACGAGGACTATGAAAAAATGGATTGGTACAAATGTCTGATGATGTACGGCGTCCGTTCCGAGAGCGTCGGCGACTCGGACGATTCGGAGAGCGAGGGCGCGGCCGAGCTGACAACTGCGCTGACGGAGGACTCCGTGCGAGACGACACCGACCTCATGCTGGTACCCACGATATTGAATAAGGTTGTACTGCCCAAGATTACAGAGCTGGTGGAGAGTGCGTGGGACCCGATGAGCGTGCGCGCGTGCGTGCGTCTGCGTCACGTGGTGGTGCGCGCGGCGAGAGTGCCGCGCTGCGCCGCGCCGCTGCGCCGcctcgccgccgccgccgccgcgcagCTCGCCGCCGCGCTGCACGCCGACGTCTTCCTGCCCGCGCTGCCGCCCGCTGTGATGGAGGGTCCGGGCGGTGCGTTCTGGCGGCGCTGCATGGGCAGCGGCGTGCGGCTGTTGCGCGGCGCGCTCGCGCTCACCTCGCCGCCCGACCTGCTACGGAACGACCACCACGTGCTGGCGCTCATCGAAACACTAAGTTGCGCAGCGGGCGCGGCTCCAGGGCCGTTCATCACATCGGCCGCCGTAGCGCTCGCGGAGACGCTGCCCCGCGCCGGCGCCCTGCGTCATGCGGCGCTGAAGCGGCTGGCCCGGCTCACCACGCTGGCTCTCACAAGGCTCGACTCCGACAACCCGCTGCATCTGAAAGCCATTGAGCAAGCACGGGCGGTGTTGGCGGAAGCAAAAGCTATGGAATGA
Protein Sequence: MFRKPKKIQRRVFCADDDDDGEPEAPPPPIISLDTLEKKENIEKKENKPVKSVALLSFADEDEECEEFKVKKSSQSKRLSKRRVKERKKLPDGDSNTYDSNGHEENNSNHLEKEAISIKPKKKVTLEGLILSGRDALAADGAGDVSDEEPSPGEEGEENRGFHRYRAESVRAALAGAPGHIPDAALIHAARKTRQQARELGDFVPIQSEPVSGSRLVREGDGDDSADDEEDRIEVRGLDMPSDKPQRGTAAIDPEEEDNSEVEWVEQQMQKAMPTIIDVTGDCAVELNPFAVAPPPPRMPMAPHLRPLVAAGASQPPGSAQQLVTSLTERLEELQLDRINTGNKREALQKQLLNLAQIRESRAARRAQLDAAYRRAQTARGYLTDLIECLDEKMPQLEALESRALAMHRRRHEFLVERRRADVRDQAQDVLSIAARPGSVKQPDGPEKVRRTAEREGRRRARRLKREAAPGAPRLHRDGDSSDDELPPAEHHYAITERDGIRAQSSLLFADALEAWRGAGGVCARLAAWRRRDPATYNDAQLPAALPKLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRSESVGDSDDSESEGAAELTTALTEDSVRDDTDLMLVPTILNKVVLPKITELVESAWDPMSVRACVRLRHVVVRAARVPRCAAPLRRLAAAAAAQLAAALHADVFLPALPPAVMEGPGGAFWRRCMGSGVRLLRGALALTSPPDLLRNDHHVLALIETLSCAAGAAPGPFITSAAVALAETLPRAGALRHAALKRLARLTTLALTRLDSDNPLHLKAIEQARAVLAEAKAME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00663095;
90% Identity: iTF_01171486;
80% Identity: -