Basic Information

Insect: Venusia cambrica
Gene Symbol: PAXBP1
Assembly: GCA_951394065.1
Location: OX596051.1:5394765-5414262[-]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.7e-14 5.3e-10 40.0 0.0 4 189 516 686 513 690 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.7e-14	5.3e-10	40.0	0.0	4	189	516	686	513	690	0.72

Sequence Information

Coding Sequence: ATGTTTCGCAAGCCGAAAAAGATCCAAAGGCGCGTGTTTTGTGCTGATGACGATGACGATGGTGATCCAGAACCTCCTCCGCCACCCATCATCAGCCAAGAGTCCTTGGAGAAAAAGGAAAAGAAAGAGCGGAAAGAAAACAAGCCTGTAAAGAGTGTGGCCCTCCTTAGCTTTGCTGACGAAGaggAAGACTGTGAGGAGTTCAAAGTAAAGAAATCATCGCAGAGCAAGCGGTTGGCAAAACGCAGGGATAAGGAAAGAAAAAAAGTTCCCGATAGTGATAGTAACAAAAATGACAGTAATGGCCATGAGGAAAACAACCACACAGAAAAGGAAGCCAACCACAAGCCGAAGAAGAAAATAACTCTGGAAGGGCTGATCTTATCGGGGCGGGATGCGCTGGCTGCGGGAAGCGGGGATGTTTCCGATGAGGACGGGGAAGGGGTTGAGGAGGGGGATGATAGGGGATTCCACCGGTACCGGGCGGAGTCGGTGCGGGCGGCGCTGGCGGGGGCCCCGGGGCACATCCCCGACGCGGCGCTCATCCACGCCGCACGCAAGACCAGACAGCAGGCGCGTGAGCTCGGGGACTTCGTGCCGATACAGTCAGAGCCAGTGGCGGGCTCGCGGCTGGTAAGGGAAGGGGATGACTCCGCTGATGACGATGAAGACCGCATACAAGTCAGGGGGCTGGAGATGCCAAGTGATAAGCCTAAAAGAGGCACGGCAGCTATCGATCCCGACGAAGAGAATAATAGCGAGGTGGAGGAGTGGGAAGAGCAACAGATAAAGAAAGCGATGCCTGCCATCATCGATATTACGGGTGAAGGCTGTATAGAGTTGAATCCGTTTGCCGTCGCGCCGGCGCCGCCGCGCATCCCGATGGCGCCACACTTGCGGCCGCTGACGGCAGTCAGCGCCGGTGCACCACCTGCTTCTGCGCAAGAATTAGTAGCTGCTCTTACTGAAAGGTTAGAAGAACTGCAACTAGACAGGATCAACACGGCGAACCAGCGGGAACAGCTGCGGAGTCGGTTGTTGCACCTCACCCGAGTGAGGGAGAGtcgcgcggcgcggcgcggggAGCTGGACGCCGCGTACCGGCGGGCGCAGGCCGCGCGCGGGTACCTCACCGACCTCATCGAGTGTCTGGACGAAAAGATGCCGCAACTGGAAGCGTTGGAGAACCGCGCGCTGGCGCTGCATCGCAGACGACACGACTTCCTCGTGGAGCGGCGCCGCGCCGACGTCAGGGACCAGGCGCAAGACGTCATGGCCTTAGCTGCTCGAGCGGGTTCGGTGCGTGCTCCGGACGGACCGGACAAAATCCGGCGCGGTGCGGAGCGCGAGGGGCGGAGGCGGGCGCGGAGGCTGAAGCGGGAGGGGGCGGGGGGCGGGGCGCGCGCGCACCGCGACGGGGACTCCAGCGACGACGAGCTGCCTCCCAGCGAGCACCATCACGCACTCGCGGAGAGAGATAGCATCCGTGGCGCGGCGGGTTCGCTGTTTGCGGACGCGCTGGAGGCGTGGCGCGAGGTACACGGCGTGTGCTCGCGTCTGGCGTCGTGGCGCCGCCGCGACCTCGCTGCCTACTGTGACTCGCATCTACCCGCCGCCCTGCCCAAACTGCTGGCGCCTTACGTCCGACACCAGCTTATTCTATGGAATCCTTTAGCTGACGAAGACAACGAGGATTACGAGAAAATGGATTGGTACAAATGTTTGATGATGTACGGCGTCCGGGCCGAGAGCGGCGGCTCCTCGGGCTCCTCGGACGAGGAGTCCCCGCCCCACGCCGCGCCGCCCGCGGACCCCACGCCCCCCTCTGAGAACGACGTGCGCGACGATCCCGACCTCATGCTGGTACCCACCATCTTGAATAAGGTTGTACTGCCCAAGATTACAGAGTTGATTGAGCAATCATGGGACCCGATGTGCGTTCGCGCATGTGTACGTCTCCGTCACGTGATCGTGCGTGCGGGTGGCGCGGGGGGCGGGGCCACGGCACTGAGTCgtctcgccgccgccgccggcgccaaGCTCGCCGCCGCGCTGCACGCCGACGTATTCCTACCGCCGCTGCCTCCCGCTGTGATTGAGGGTCCAGGCGGCTTGTTCTGGCGGCGGTGTGTCGGCGCGGGCGTGCGTCTGCTGCGCGGAGCGTTGGCGCTCACCTCGCCGCCCGCGCTGCTCGCCAACGACCACTACGTGTTGGCTCTCATCGAAACGCTCAGCATGGCGGCGGGCGCGGCGCCTGCCCCGTTCATGACGTCGGCGTGCGTCGCGCTGGCGGAGACGCTGCCTCGCGGGGGGACGCTGCGCGCCGCCGCGCTGGCCCGCCTCGCGCGCCTCGCCTCGCTGGCGCACTCCCGGCTAGACAACGACAACCCGCTGCATCTGAAAGCAATCGAGCAAGCACGAGCCGTATTAGCGGAGGCAAAAGCGATGGAATGA
Protein Sequence: MFRKPKKIQRRVFCADDDDDGDPEPPPPPIISQESLEKKEKKERKENKPVKSVALLSFADEEEDCEEFKVKKSSQSKRLAKRRDKERKKVPDSDSNKNDSNGHEENNHTEKEANHKPKKKITLEGLILSGRDALAAGSGDVSDEDGEGVEEGDDRGFHRYRAESVRAALAGAPGHIPDAALIHAARKTRQQARELGDFVPIQSEPVAGSRLVREGDDSADDDEDRIQVRGLEMPSDKPKRGTAAIDPDEENNSEVEEWEEQQIKKAMPAIIDITGEGCIELNPFAVAPAPPRIPMAPHLRPLTAVSAGAPPASAQELVAALTERLEELQLDRINTANQREQLRSRLLHLTRVRESRAARRGELDAAYRRAQAARGYLTDLIECLDEKMPQLEALENRALALHRRRHDFLVERRRADVRDQAQDVMALAARAGSVRAPDGPDKIRRGAEREGRRRARRLKREGAGGGARAHRDGDSSDDELPPSEHHHALAERDSIRGAAGSLFADALEAWREVHGVCSRLASWRRRDLAAYCDSHLPAALPKLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRAESGGSSGSSDEESPPHAAPPADPTPPSENDVRDDPDLMLVPTILNKVVLPKITELIEQSWDPMCVRACVRLRHVIVRAGGAGGGATALSRLAAAAGAKLAAALHADVFLPPLPPAVIEGPGGLFWRRCVGAGVRLLRGALALTSPPALLANDHYVLALIETLSMAAGAAPAPFMTSACVALAETLPRGGTLRAAALARLARLASLAHSRLDNDNPLHLKAIEQARAVLAEAKAME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00663095;
90% Identity: -
80% Identity: -