Basic Information

Insect: Epirrhoe tristata
Gene Symbol: Znf296
Assembly: GCA_951394285.1
Location: OX596136.1:406889-412103[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.6e-05 0.0011 19.8 0.5 1 23 159 181 159 181 0.98

2 15 9.6e-05 0.0064 17.3 2.0 2 23 186 207 185 207 0.96

3 15 6e-06 0.00041 21.1 3.2 1 23 213 235 213 235 0.97

4 15 2.9e-05 0.002 19.0 0.6 1 23 240 264 240 264 0.95

5 15 3e-07 2e-05 25.2 1.1 1 23 270 292 270 292 0.98

6 15 7.3e-08 4.9e-06 27.2 0.4 1 23 298 320 298 320 0.98

7 15 1.9e-06 0.00013 22.7 2.0 1 23 326 348 326 348 0.98

8 15 9.2e-05 0.0062 17.4 0.2 3 23 356 376 354 376 0.98

9 15 1.3e-05 0.00084 20.1 1.6 3 23 384 404 383 404 0.99

10 15 5e-05 0.0033 18.2 2.8 2 23 425 446 425 446 0.98

11 15 2.8e-05 0.0019 19.0 0.7 1 23 452 474 452 474 0.98

12 15 1.7e-05 0.0011 19.7 0.2 2 23 481 502 481 502 0.97

13 15 1.1e-06 7.5e-05 23.4 1.0 1 23 507 530 507 530 0.97

14 15 2.9e-05 0.0019 19.0 0.9 1 23 536 558 536 558 0.97

15 15 0.0017 0.12 13.4 0.3 1 21 564 584 564 585 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.6e-05	0.0011	19.8	0.5	1	23	159	181	159	181	0.98
2	15	9.6e-05	0.0064	17.3	2.0	2	23	186	207	185	207	0.96
3	15	6e-06	0.00041	21.1	3.2	1	23	213	235	213	235	0.97
4	15	2.9e-05	0.002	19.0	0.6	1	23	240	264	240	264	0.95
5	15	3e-07	2e-05	25.2	1.1	1	23	270	292	270	292	0.98
6	15	7.3e-08	4.9e-06	27.2	0.4	1	23	298	320	298	320	0.98
7	15	1.9e-06	0.00013	22.7	2.0	1	23	326	348	326	348	0.98
8	15	9.2e-05	0.0062	17.4	0.2	3	23	356	376	354	376	0.98
9	15	1.3e-05	0.00084	20.1	1.6	3	23	384	404	383	404	0.99
10	15	5e-05	0.0033	18.2	2.8	2	23	425	446	425	446	0.98
11	15	2.8e-05	0.0019	19.0	0.7	1	23	452	474	452	474	0.98
12	15	1.7e-05	0.0011	19.7	0.2	2	23	481	502	481	502	0.97
13	15	1.1e-06	7.5e-05	23.4	1.0	1	23	507	530	507	530	0.97
14	15	2.9e-05	0.0019	19.0	0.9	1	23	536	558	536	558	0.97
15	15	0.0017	0.12	13.4	0.3	1	21	564	584	564	585	0.95

Sequence Information

Coding Sequence: ATGTCTGGTTCTGTGTGTCGTGTTTGCCTCGGCGGGGGAAGGATGGAATTTGTCGACGATGAAATACTGCTGATGCTGTACGAGAAACTTACCAGTGCTAAGCTAAACACAGGTGATGGTCGTCCGAGCACCTTATGCTTCATCTGCTCATCCCAACTGCAGAGGTGCCGACGCTTCTCCGAGCTCGCTCACAGATCAGAGAAGTTCCTCAATGATCTGCTTATTCATAATCAGAGAGTAACACATGAAGCTATATCTATGCTAAAGATTGGACCAGCACACAATCTGTCAACTACAAACCTAGACAATATTAACTATGATGGCTACTCAGACACACAAATGCTTGAAGTCTCAGTTAAACAAGAGTCAAGCGACGACACTAAGTTAGAAAGAAACTCTCTTAATGATGACTTTGACAGTGAAGACTCATTACCTATTAAGAAAGAAGAAGTATTTACAACCAACGAGTTATACTACAACTGTGACGAATGTCAAATTAAGTTTATATCCAAAAGGCAGTTATCTGCACATTTAAGAATACACAACTACGATACATATTGCAAGAAATGCAACAAGCTATTCTCAAACACAAGCAGTTTAAAAGGCCATATGAGTATTCATACTGGGGAAAGACCGTTTGCTTGCCATATATGCAGCAGAACGTTTAGAAAAAAACCTTACTTAACCAGCCACATTCGTATGCACAAGGAAAAACCTTTCTTCTGCACTCTTAATGATTGCAACGCAGCGTTCGCTCACCCAGACAGCTTAAACAAGCATATGCAGATACACACACGTGAAAATCCATTCGTTTGTAACCGTTGCAACAAAACTTTTGCTTACAAAAGCGCTTTAACCCGCCATGTAAGAATTCACACAGGTGTTAAACCATTTGTTTGTACCGATTGCGACATGACATTTGCTGTCCAAAGCAGCTTAACGAAACACATGAGAATACATACCGGTGTTAAGCCATATGCTTGTGATAAATGCGACGCAGCTTTTAACCATGCAGGGAATCTTAAGAGGCATATGCATACGCATAATGAGGAGAAACCCTTTGGTTGTGAAAGATGTGATAAAAGATTTTCTGATGAAGAAGGTTTGAAAGAACATGCGAGGGTGCATACAGGAGAAAAACCGCATGGTTGTAGTAAGTGTGATATGAAATTCGCTTTCAGTAGCACTCTGACTAAGCATATGCAGACGCATGAAGATAAACCAGTGCCTAAAGAGCCTCCAAGCCAGCCTACCAGAACCCGTGTTCGACCTACATGCCAAGTTTGCAAGAAGCAGTTGACATCTAATTCTCATTTAATCATACACATGAGATCTCACACGGGGGAAAGGCCGTATCCTTGTAGTATCTGTAATCAGACCTTTCGGACTAAGACTATACTTAAAGggCATATGCGCGTACACACCGGTGAAAAAGTAGCCTCATGCGAAATATGCGGCATGGCGTTCACCCAGACCGGCAGCCTGGGGAAGCATATGAGATTGCACACAGGCGAGCTATATGCCTGTCATCTATGCGGGAAGGGATATAAGCAGAGTGGACAACTTACTGCGCATATACGAAACTTCCATGAAGGCATTAAGAGGTTCTCCTGCGATATATGCAATGCTagATTCACAGCCCGCGGCCACCTTCGCAATCATATGAACGCTCACGCCGGTATCAAGCCATACGCCTGCCTCAAGTGTGGTAACAGGTTCGCAACCCGGACAGTGCTACGGCGGCATATCAAGAACTCCTGCAAATGA
Protein Sequence: MSGSVCRVCLGGGRMEFVDDEILLMLYEKLTSAKLNTGDGRPSTLCFICSSQLQRCRRFSELAHRSEKFLNDLLIHNQRVTHEAISMLKIGPAHNLSTTNLDNINYDGYSDTQMLEVSVKQESSDDTKLERNSLNDDFDSEDSLPIKKEEVFTTNELYYNCDECQIKFISKRQLSAHLRIHNYDTYCKKCNKLFSNTSSLKGHMSIHTGERPFACHICSRTFRKKPYLTSHIRMHKEKPFFCTLNDCNAAFAHPDSLNKHMQIHTRENPFVCNRCNKTFAYKSALTRHVRIHTGVKPFVCTDCDMTFAVQSSLTKHMRIHTGVKPYACDKCDAAFNHAGNLKRHMHTHNEEKPFGCERCDKRFSDEEGLKEHARVHTGEKPHGCSKCDMKFAFSSTLTKHMQTHEDKPVPKEPPSQPTRTRVRPTCQVCKKQLTSNSHLIIHMRSHTGERPYPCSICNQTFRTKTILKGHMRVHTGEKVASCEICGMAFTQTGSLGKHMRLHTGELYACHLCGKGYKQSGQLTAHIRNFHEGIKRFSCDICNARFTARGHLRNHMNAHAGIKPYACLKCGNRFATRTVLRRHIKNSCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01336120;
90% Identity: iTF_00267396; iTF_01529383; iTF_00661531;
80% Identity: -