Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: Znf296
Assembly: GCA_958496255.1
Location: OY292450.1:184948-193818[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.2e-05 0.0015 19.5 1.7 1 23 144 166 144 166 0.98

2 15 0.00011 0.0072 17.4 2.0 2 23 171 192 170 192 0.96

3 15 6.7e-06 0.00045 21.2 3.2 1 23 198 220 198 220 0.97

4 15 3.2e-05 0.0022 19.0 0.6 1 23 225 249 225 249 0.95

5 15 1.9e-07 1.3e-05 26.0 0.9 1 23 255 277 255 277 0.98

6 15 1.4e-07 9.2e-06 26.5 0.3 1 23 283 305 283 305 0.98

7 15 3e-06 0.0002 22.2 2.1 1 23 311 333 311 333 0.97

8 15 0.00019 0.013 16.6 0.2 3 23 341 361 339 361 0.98

9 15 4.1e-05 0.0028 18.7 3.0 1 23 367 389 367 389 0.96

10 15 5.5e-05 0.0037 18.3 2.8 2 23 410 431 410 431 0.98

11 15 2.1e-05 0.0014 19.6 0.7 1 23 437 459 437 459 0.98

12 15 8e-06 0.00054 20.9 0.3 2 23 466 487 466 487 0.97

13 15 1.3e-06 8.8e-05 23.4 1.5 1 23 492 515 492 515 0.97

14 15 3.2e-05 0.0022 19.0 0.9 1 23 521 543 521 543 0.97

15 15 0.0019 0.13 13.4 0.3 1 21 549 569 549 570 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.2e-05	0.0015	19.5	1.7	1	23	144	166	144	166	0.98
2	15	0.00011	0.0072	17.4	2.0	2	23	171	192	170	192	0.96
3	15	6.7e-06	0.00045	21.2	3.2	1	23	198	220	198	220	0.97
4	15	3.2e-05	0.0022	19.0	0.6	1	23	225	249	225	249	0.95
5	15	1.9e-07	1.3e-05	26.0	0.9	1	23	255	277	255	277	0.98
6	15	1.4e-07	9.2e-06	26.5	0.3	1	23	283	305	283	305	0.98
7	15	3e-06	0.0002	22.2	2.1	1	23	311	333	311	333	0.97
8	15	0.00019	0.013	16.6	0.2	3	23	341	361	339	361	0.98
9	15	4.1e-05	0.0028	18.7	3.0	1	23	367	389	367	389	0.96
10	15	5.5e-05	0.0037	18.3	2.8	2	23	410	431	410	431	0.98
11	15	2.1e-05	0.0014	19.6	0.7	1	23	437	459	437	459	0.98
12	15	8e-06	0.00054	20.9	0.3	2	23	466	487	466	487	0.97
13	15	1.3e-06	8.8e-05	23.4	1.5	1	23	492	515	492	515	0.97
14	15	3.2e-05	0.0022	19.0	0.9	1	23	521	543	521	543	0.97
15	15	0.0019	0.13	13.4	0.3	1	21	549	569	549	570	0.95

Sequence Information

Coding Sequence: ATGGACACTGTGGACGATGAAATACTGCTTAGGCTGTACGAGAAACTAACTAGTGCTAAGTTACACACGAGTGATGGCCGGCCCAGCACGCTGTGCTACATATGCACCTCGCAGCTCCAACGATGTCGGCGCTTCAGCGACCTCGCACATCGATCTGAGAAGTACCTTAGCGATCTACTACTCAATAATCAGAGAATAACTCACGAAACTATATCATTGCTGAAGACAGAACCAGCACACAACCTCTCAACCACAATCCTAGACAACACCACCTACGATGGATACTCCGACACACAGATATTACAGGTGTCCGTCAAACAGGAGTCAAATGAAGATACCAAAATAGAACGAAACGATGATGATGACTTCGACAACGAAGACTCAACACCCATCAAGAAAGAGGAAGTATTCACCACGAACGAACTATACTACAACTGTGAAGATTGCCACATAAAGTTCATGTCGAAACGTCAACTATCCGCACACATCAGAATCCACAACTACGACACATACTGCAAGAAATGCAACAAGCTATTCTCGAACACCAGCAGCTTAAAAGGCCACATGAGCATCCATACCGGAGAACGGCCGTTCGCTTGCCATATCTGTAGCCGAACATTCAGAAAAAAACCTTACCTAACAAGCCATATCCGAATGCACAAAGAGAAGCcatttttctgcactctcaacgATTGCAACGCGGCATTCGCCCACCCAGATAGCTTAAACAAGCACATGCAGATACATACACGAGAAAATCCGTTCGTCTGCAACCGTTGCGACAAAACCTTCGCCTACAAGAGCGCATTGACCCGTCATGTTAGGATTCACACGGGAATCAAGCCGTTTGTGTGCAGCGAGTGCGATATGACGTTCGCCGTGCAGAGCAGTCTCACGAAACACATGAGAATACACACGGGAATCAAGCCGTTTGCCTGCGACAAGTGCGACGCGGCGTTCAACCATGCGGGGAACTTGAAGCGACATATGCATACACATAACGAGGAAAAGCCATTTGGATGTGAAAGGTGTGATAAGAGGTACACCGACGAGGATGCATTAAAGGAGCACGCGCGGGTCCACACGGGGGAGAAGCCACATGCATGCGACAAGTGCGACATGAAGTTCGCGTTCAGCACCACCCTCACTAAACATATGCAGACGCACGAGGACAAGCCCGTGCCCAAGGAACCGCCCAGCCAGCCCACCAGGACCCGCGTCCGTCCCACCTGTCAGGTGTGTAAGAAGCAGCTGACGTCCAATTCCCACCTGATCATACACATGCGCTCCCACACCGGGGAGAGACCCTACCCCTGCAACATATGTAACCAGACCTTCAGAACAAAGACCATACTCAAAGGTCACATGCGCGTCCACACGGGCGAGAAGGTGGCGTCGTGCGAGATCTGCGGCATGTCGTTCACTCAGACCGGCTCGCTCGGGAAACACATGCGCCTGCACACAGGGGAACTGTACAACTGCCATCTCTGCGGCAAGGGGTACAAGCAGAGCGGGCAGCTCACCGCGCACATCAGGAACTACCACGAGGGGATCAAACGGTTCTCGTGCGACATATGCAACGCTAGGTTCACGGCGCGCGGCCACCTCCGCAACCACATGAACGCGCACGCCGGCATCAAACCATACGCGTGCCTCAAGTGCGGTAACAGGTTCGCGACCCGGACCGTGCTGAGGCGACACATCAAGAACTCTTGCAAATAA
Protein Sequence: MDTVDDEILLRLYEKLTSAKLHTSDGRPSTLCYICTSQLQRCRRFSDLAHRSEKYLSDLLLNNQRITHETISLLKTEPAHNLSTTILDNTTYDGYSDTQILQVSVKQESNEDTKIERNDDDDFDNEDSTPIKKEEVFTTNELYYNCEDCHIKFMSKRQLSAHIRIHNYDTYCKKCNKLFSNTSSLKGHMSIHTGERPFACHICSRTFRKKPYLTSHIRMHKEKPFFCTLNDCNAAFAHPDSLNKHMQIHTRENPFVCNRCDKTFAYKSALTRHVRIHTGIKPFVCSECDMTFAVQSSLTKHMRIHTGIKPFACDKCDAAFNHAGNLKRHMHTHNEEKPFGCERCDKRYTDEDALKEHARVHTGEKPHACDKCDMKFAFSTTLTKHMQTHEDKPVPKEPPSQPTRTRVRPTCQVCKKQLTSNSHLIIHMRSHTGERPYPCNICNQTFRTKTILKGHMRVHTGEKVASCEICGMSFTQTGSLGKHMRLHTGELYNCHLCGKGYKQSGQLTAHIRNYHEGIKRFSCDICNARFTARGHLRNHMNAHAGIKPYACLKCGNRFATRTVLRRHIKNSCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01336120;
90% Identity: iTF_00662412;
80% Identity: -