Basic Information

Insect: Xanthorhoe spadicearia
Gene Symbol: ZNF296
Assembly: GCA_947086425.1
Location: OX352222.1:410133-416780[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.2e-05 0.0018 18.8 0.3 1 23 162 184 162 184 0.98

2 15 9.5e-05 0.0054 17.3 2.0 2 23 189 210 188 210 0.96

3 15 6e-06 0.00034 21.1 3.2 1 23 216 238 216 238 0.97

4 15 8.5e-05 0.0049 17.5 0.7 1 23 243 267 243 267 0.95

5 15 3e-07 1.7e-05 25.2 1.1 1 23 273 295 273 295 0.98

6 15 1e-07 6e-06 26.6 0.4 1 23 301 323 301 323 0.98

7 15 1.9e-06 0.00011 22.7 2.0 1 23 329 351 329 351 0.98

8 15 0.00018 0.01 16.4 0.3 3 23 359 379 357 379 0.97

9 15 0.00022 0.013 16.2 3.6 1 23 385 407 385 407 0.97

10 15 4.9e-05 0.0028 18.2 2.8 2 23 427 448 427 448 0.98

11 15 4.6e-05 0.0026 18.3 0.4 1 23 454 476 454 476 0.98

12 15 7.2e-06 0.00041 20.9 0.3 2 23 483 504 483 504 0.97

13 15 1.1e-06 6.3e-05 23.4 1.0 1 23 509 532 509 532 0.97

14 15 2.9e-05 0.0016 19.0 0.9 1 23 538 560 538 560 0.97

15 15 0.0017 0.098 13.4 0.3 1 21 566 586 566 587 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.2e-05	0.0018	18.8	0.3	1	23	162	184	162	184	0.98
2	15	9.5e-05	0.0054	17.3	2.0	2	23	189	210	188	210	0.96
3	15	6e-06	0.00034	21.1	3.2	1	23	216	238	216	238	0.97
4	15	8.5e-05	0.0049	17.5	0.7	1	23	243	267	243	267	0.95
5	15	3e-07	1.7e-05	25.2	1.1	1	23	273	295	273	295	0.98
6	15	1e-07	6e-06	26.6	0.4	1	23	301	323	301	323	0.98
7	15	1.9e-06	0.00011	22.7	2.0	1	23	329	351	329	351	0.98
8	15	0.00018	0.01	16.4	0.3	3	23	359	379	357	379	0.97
9	15	0.00022	0.013	16.2	3.6	1	23	385	407	385	407	0.97
10	15	4.9e-05	0.0028	18.2	2.8	2	23	427	448	427	448	0.98
11	15	4.6e-05	0.0026	18.3	0.4	1	23	454	476	454	476	0.98
12	15	7.2e-06	0.00041	20.9	0.3	2	23	483	504	483	504	0.97
13	15	1.1e-06	6.3e-05	23.4	1.0	1	23	509	532	509	532	0.97
14	15	2.9e-05	0.0016	19.0	0.9	1	23	538	560	538	560	0.97
15	15	0.0017	0.098	13.4	0.3	1	21	566	586	566	587	0.95

Sequence Information

Coding Sequence: ATGTCGCGACACACAGACCCCGTCTGTCGCGTTTGCCTCGGTGGGGGCAGAATGGACACTGTTACCGACGAAATACTACTGCGGCTGTACGAGAGAGTAACTAGTGCTAAGTTACACACGGGCGATGGTCGGCCGAGCACGCTGTGTTACATCTGCTCCTCACTGCTGCAGAGATGCCGTCGCTTCTCGGACCTGGCGCACAGATCTGAGAAGTTCTTGAATGATATACTACTTAATAACCAGAGAGTAACACATGAAGCTATATCAATGCTAAAGATCGGAACATCCCATAACTTATCAACAACAATACTAGACAATGTCAACTATGATGGATACTCCGACACACAAATCCTAGAAGTCTCCGTAAAACAAGAATCAAACGACGATACAAAAATAGAAAGAAACTCGCTTAACGATGACTTTGACAGTGAAGACACGACGCCTATTAAGAAGGAAGAAGTGTACACGACAAATGAATTGTACTACAACTGCGAAGAGTGTGAAATTAAGTTCATGTCTAAACGACAGCTGTCGGCACACATCCGTATACACAACTATGATACATACTGCAAGAAATGTAACAAACTATTCTCAAATACTAGCAGTTTAAAAGGGCATATGAGCATTCATACTGGAGAGAGACCATTTGCCTGCCACATCTGTAGTAGAACATTTCGAAAGAAGCCATACTTAACTAGTCATATACGAATGCATAAAGAGAAGCCATTTTTCTGTACCCTTAACAATTGCAACGCTGCGTTTGCGCATCCAGACAGTTTGAACAAGCATATGCAGATACATACAAGGGAGAATCCGTTTGTGTGTAATCGTTGTAACAAAACTTTTGCGTACAAAAGTGCATTGACTCGTCATGTTAGAATACATACGGGGATCAAACCGTTTGTTTGTACGGAATGTGATATGACTTTTGCTGTGCAGAGCAGTTTGACCAAACATATGCGCATACACACAGGTGTTAAGCCGTACGCTTGCGACAAATGCGACGCTGCGTTCAACCACGCGGGGAATTTGAAGCGACATATGCATACACATAACGAGGAGAAACCGTTTGGCTGTGAGAGGTGTGACAAGAGATTCCCCGACGAGGACACCTTAAAGGAACACTCTCGAGTCCACACAGGAGAGAAGCCGCACTCTTGTGATCAATGCGACATGAAGTTCGCGTTTAATAGTACTCTCACTAAACACAAGCTGACGCATGCAGACACGCCGGTGGCTAAGGAGACTAGCCAGCCTACCAGGACCCGCGTCCGTCCAACATGCCAGGTGTGCAAGAAGCAGCTGACCTCGAACTCGCACCTCATCATCCACATGCGCTCCCACACCGGCGAGCGGCCCTACCCCTGCGGCATATGCAACCAGACCTTCAGGACCAAGACTATACTCAAAGGTCACATGCGAGTCCACACCGGGGAAAAAGTAGCCTCATGCGAGATATGCGGCATGTCGTTCACACAGACGGGCAGTCTCGGGAAGCATATGCGACTACACACGGGCGAGCTATACGCCTGCCATCTCTGTGGCAAGGGATACAAGCAGAGTGGACAGTTGACGGCACATATAAGGAACTTCCATGAGGGGATCAAGAGGTTCTCATGCGACATTTGTAATGCTAGGTTCACTGCCCGCGGTCACCTCCGCAACCACATGAACGCGCACGCGGGCATCAAGCCCTACGCCTGTCTCAAGTGCGGTAACAGGTTCGCTACCCGGACCGTGCTCAGGCGGCACATCAAGAACTCATGCAAATGA
Protein Sequence: MSRHTDPVCRVCLGGGRMDTVTDEILLRLYERVTSAKLHTGDGRPSTLCYICSSLLQRCRRFSDLAHRSEKFLNDILLNNQRVTHEAISMLKIGTSHNLSTTILDNVNYDGYSDTQILEVSVKQESNDDTKIERNSLNDDFDSEDTTPIKKEEVYTTNELYYNCEECEIKFMSKRQLSAHIRIHNYDTYCKKCNKLFSNTSSLKGHMSIHTGERPFACHICSRTFRKKPYLTSHIRMHKEKPFFCTLNNCNAAFAHPDSLNKHMQIHTRENPFVCNRCNKTFAYKSALTRHVRIHTGIKPFVCTECDMTFAVQSSLTKHMRIHTGVKPYACDKCDAAFNHAGNLKRHMHTHNEEKPFGCERCDKRFPDEDTLKEHSRVHTGEKPHSCDQCDMKFAFNSTLTKHKLTHADTPVAKETSQPTRTRVRPTCQVCKKQLTSNSHLIIHMRSHTGERPYPCGICNQTFRTKTILKGHMRVHTGEKVASCEICGMSFTQTGSLGKHMRLHTGELYACHLCGKGYKQSGQLTAHIRNFHEGIKRFSCDICNARFTARGHLRNHMNAHAGIKPYACLKCGNRFATRTVLRRHIKNSCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01336120;
90% Identity: iTF_00662412;
80% Identity: -