Ecan020883.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949126895.1
- Location
- OX421466.1:26136645-26157830[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.075 4.6e+03 -1.7 0.4 62 91 72 102 36 106 0.59 2 3 5e-81 3.1e-76 258.3 24.2 1 298 122 412 122 414 0.93 3 3 1 6.2e+04 -5.7 15.8 1 49 410 457 410 483 0.73
Sequence Information
- Coding Sequence
- ATGGGACATCGATCTGAAGTAGCTACACCTCATAATAGCGACGACGAGAGTGGAGATGCTTTTACTGATGGTGATTTTGGCGATTCAGATGATGAAACGATCGTAGAAAGAAACGGTGATGTGAACGGATCCAATATGCCTACAACCGAAGCAAAGAACGACGATATTCATAAAGTAAATGGAGCAACTAATGGATTTTCTAATGATGTAAAAGAACAACCTAGGCATATGTCTCGTACAATAAGCGAGACTCACTCAAGCGATGCAGAGAATCCGAGCTTCTCCCTATCAGACCTTCGCAGAGACTCTCATGGCGACCAAAATCCCTCAATAGTCGGCATTCTTGGCGACCAACAGAATCACGCAGAACAGCGGTTGGCGGCGCGTCGCGCTGCTCGGGCGGAGGCGCGGGAGATCCGCATGCGTGAGCTGGAGCGACAGCAAAGGGAACAAGAGGACCATGCCGACAAGGCTTACGATATGTATGGGGGCAAGACAGAAACGGTGGGGCGTCGCGACCGCACGCGGCTGGCGGCACTCAGCCCCGCCAGCTCGGTGCACTCGCCGCGTCGTAGCTCCGAGGACTCGGTTGATGACACCTTCAGCATCAAGGACCTTAGACACGAGTTGAAGGAAGTTGAGGAGAAATTCCGCAAGGCGATGATACTGAACGCGCAGTTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTCAAGGACAGGATAGAGGAGCTCCACGAAGAATTCGCGCAGCTACAGCGCGAGCACAGAGAGAAATGCTCATCCTTAGAGCGTGTCAAACGCGAACACGAATCCGTATCCCGGGAACTTAACGCGGCGCGGGACGCAGTCCGGGCCCGGGACTGTGCGGCGGCCGCGGCGGGCTACGCATTCGTGGAGGCGGCGGCGCTGGAGGCTGCGCCCCCCGGCGTGGGGCAGGCGGTCGGCGCCGTGCCTCCGTTAGCGCTTGTGTCCCACCACGCCGAGCAGCTGCTTAATGACGCTGGAGAGGGACCGCTAGACGTGCGGTTGCAAAAGTTGCTGAGTTCGAAACAGTCTTTAGAGTCCGAAGTTCGTAAGTTGAAGCTACAGCTGAACGAGGAGCGCGCCGCCAGGCAGAACGGAGTGGCCAATCATCACGACCAGGAGTATGAGAACGAGTTGGAGAGCGCGCGCAAGAGCCTGTCGGAGGCGAAGGGTCGGGCGGCGAGGGCTGAGGCGGAGGCGGCGCTGCACGCGGCGCACGTGGCGAGGCTGGAGGCGCAACTGGCGCGGCTGCGGGCTCGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGCTCGGGAAGCCCTAAACCGAGTAGAAGAATTGGAGACTGAGAACAGCCACCTAACGAAACGACTAGACAAACTCAAGAACGCGAAATCCGCACTCCTCAAGGACCTGTGA
- Protein Sequence
- MGHRSEVATPHNSDDESGDAFTDGDFGDSDDETIVERNGDVNGSNMPTTEAKNDDIHKVNGATNGFSNDVKEQPRHMSRTISETHSSDAENPSFSLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYGGKTETVGRRDRTRLAALSPASSVHSPRRSSEDSVDDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEFAQLQREHREKCSSLERVKREHESVSRELNAARDAVRARDCAAAAAGYAFVEAAALEAAPPGVGQAVGAVPPLALVSHHAEQLLNDAGEGPLDVRLQKLLSSKQSLESEVRKLKLQLNEERAARQNGVANHHDQEYENELESARKSLSEAKGRAARAEAEAALHAAHVARLEAQLARLRARQDHQDEHEEALKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01075459;
- 90% Identity
- iTF_00908866;
- 80% Identity
- -