Ecan035509.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- -
- Assembly
- GCA_949126895.1
- Location
- OX421476.1:1485809-1500765[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.8e-11 1.3e-08 36.1 0.0 4 39 149 185 146 189 0.89 2 4 2.1e-10 7.3e-08 33.7 0.3 2 39 201 238 200 242 0.92 3 4 1.2e-14 4.3e-12 47.3 0.1 2 45 256 300 255 300 0.96 4 4 3.6e-17 1.2e-14 55.4 0.0 1 42 307 349 307 351 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGCCACGGACTATCGCAGACCCAGGTGAAATGCGAGCCGCTGTCTGACGAAGAGGATAGCAATTCACAGTTCGCGCACAATTATCTATCTGGTCAGGGTAGCGGCCTGGAGGAGCTGGCACCGCTGGCGCCGGCGGGCCCCGCCGCCACGCCCGTGTGCGTCAAGCAGGAACGTGCCTCTCCCCCAGCAGCCATGCTGGAGACGCTCGAGTCAGCACCGCAGCATGCTAAGAGCTCGTCGCTATTGGGCCGCCATTTGACAATAATGGACGCCAATGAAGTGCTGGACTCTACAGATTTCATTCCACTGTTAGCTGTTAAAGATGAACCCTCGTCTGAAGGTGAACAGCCACACCTTAGCGGCGAAGACACGAGTGACTCTTGTGGCAGGCAACTGTCGCCGATACCGCGGACCAGTCCCAAGAACTGGACGCAGCAAGACATGGAACGAGCGCTGGATGCTCTTCGGAAACACCAGATGAGCCTCACGAAGGCATCGGCCACCTACGGCATTCCTTCCACGACGCTGTGGCAGCGCGCGCACCGGCTGGGCATCGACACGCCAAAGAAGGAGGGCGCCGCCAAGTCGTGGAGCGAGGCCGACTTGCGCGGCGCGCTGCACGCGCTCAGGGCCGGCGCCATCTCCGCCAACAAAGCGAGCAAAGCTTACGGCATCCCCAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGTCGGCGCCCTTCAACGCCGCGCCCACGGCCTGGCGCCGCGCCGACCTGCAGCTCGCGCTCGCCGCCATCCGCGCCGGCGCCTCCTCCGTGCAGCGCGCCGCGTCCACCTATGGCATCCCCACCGGGACGCTGTACGGGCGATGTAAGCGAGAGGGCATCGAACTGTCCCGCTCCAACCCCACGCCTTGGTCGGAGGATGCCATGGGAGAAGCCCTTGAAGCAGTAAGAGTGGGGCAGATGTCGATAAATCAGGCGGCGATACATTTCAACCTGCCTTATTCGTCGCTCTACGGCAGGTTCAAGAGGTGCAAGTACCAGATGCAGgTTGGCCCTAACAATCAGCAACAGCAACACAACCTCCACAAATCCGAAATGGACTTCCCTCAGCATCAAGCTCACCATTACTACCACCAAATGCCCTCCACACAcgaccacgacccacagacataCACACATTTGACTGAGTACCCTCATAACCTACAAATGAACGACCAATATGGGCAGTATTACCAATCTTTTAGCAGTATAGCCACCAGCTGA
- Protein Sequence
- MPGHGLSQTQVKCEPLSDEEDSNSQFAHNYLSGQGSGLEELAPLAPAGPAATPVCVKQERASPPAAMLETLESAPQHAKSSSLLGRHLTIMDANEVLDSTDFIPLLAVKDEPSSEGEQPHLSGEDTSDSCGRQLSPIPRTSPKNWTQQDMERALDALRKHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQLALAAIRAGASSVQRAASTYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQMQVGPNNQQQQHNLHKSEMDFPQHQAHHYYHQMPSTHDHDPQTYTHLTEYPHNLQMNDQYGQYYQSFSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00823839;
- 90% Identity
- iTF_00637414; iTF_00404621; iTF_01166516; iTF_00908736;
- 80% Identity
- -