Ecav010577.1
Basic Information
- Insect
- Ectemnius cavifrons
- Gene Symbol
- rdx
- Assembly
- GCA_964023945.1
- Location
- OZ030382.1:10786489-10797522[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-35 1e-32 112.6 0.7 4 109 226 329 223 330 0.96 2 2 3.5 9.5e+02 0.1 0.0 80 109 332 361 328 362 0.86
Sequence Information
- Coding Sequence
- ATGTCTCTGTGTGTTTGCAGACTTGCGGTGAGCGACTGTGCGCCTCAAACGTCACGGGTCAGCTCAAACTTGCACAGCAGCAGTAGCATGGCAGTAAGCCGTGTACCAAGCCCACCACCGCCGGAAGTGAACACCCCCGTTGCCGAGAATTGGTGTTACACGCAGGTGAAGGTGGTCAAGTTCAGCTACATGTGGACGATAAATAACTTCAGCTTCTGTCGGGAGGAGATGGGAGAAGTACTAAAGTCGTCCACCTTCTCAGCTGGGGCCAACGATAAATTAAAATGGTGCCTAAGAGTGAACCCTAAGGGTCTGGATGAGGAGAGCAAAGACTACCTGTCTCTGTATCTTCTTCTCGTTTCGTGCAACAAATCGGAAGTCAGAGCAAAGTTCAAATTTTCTATTCTTAATGCCAAAAGAGAGGAAACCAAAGCAATGGAAAGCCAACGCGCTTACAGGTTCGTCCAAGGTAAAGATTGGGGTTTCAAGAAGTTTATCAGGAGGGATTTCCTCCTGGATGAGGCTAATGGACTCCTACCCGATGATAAACTCACGATTTTCTGTGAGGTATATACCTTTGTCAGCGTGGTAGCGGACAGTGTAAACATCTCTGGGCAAAGTAATACGATACAGTTTAAAGTCCCCGAATGTCGATTACCCGATGACCTCGGATTACTATTCGAGAACCAAAAATTTAGTGATGTCACTTTAACTGTGTGTGGGAGAGAATTTCAGGCGCACAAAGCTATTCTTGCAGCGCGGAGTCCTGTCTTCTCAGCTATGTTCGAACATGAAATGGAAGAGAGGAAACAAAATCGTGTAGATATAACCGATGTGGACCACGAGGTGCTAAGAGAAATGCTACGATTTATATATACTGGAAAAGCGGCGAACTTGGAGAAAATGGCCGATGATCTTTTGGCTGCGGCAGATAAATACGCCCTGGAAAGGCTGAAGGTAATGTGCGAGGAAGCACTCTGCACGAGTTTAGCCATCGAGAATGCAGCTGATATCCTCATACTTGCCGACCTCCATAGCGCCGATCAACTAAAGGCGCAAGCCATAGACTTCATTAATACACATGCAACAGACGTGATGGACACTGCGGGCTTTAAGTCGATGGTGAACTCTCATCCACACTTGATAGCAGAAGCGTTTCGCGCGCTCGCGACCCAGCAAATTCCACCGATCGGACCGCCCAGGAAGCGAGTGAAACAGAGCTGA
- Protein Sequence
- MSLCVCRLAVSDCAPQTSRVSSNLHSSSSMAVSRVPSPPPPEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTIFCEVYTFVSVVADSVNISGQSNTIQFKVPECRLPDDLGLLFENQKFSDVTLTVCGREFQAHKAILAARSPVFSAMFEHEMEERKQNRVDITDVDHEVLREMLRFIYTGKAANLEKMADDLLAAADKYALERLKVMCEEALCTSLAIENAADILILADLHSADQLKAQAIDFINTHATDVMDTAGFKSMVNSHPHLIAEAFRALATQQIPPIGPPRKRVKQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141890;
- 90% Identity
- iTF_00868193; iTF_00867524; iTF_00109905; iTF_01077553; iTF_00868949; iTF_00730852; iTF_00730143; iTF_00873857; iTF_01267649; iTF_01268363; iTF_01269138; iTF_01407476; iTF_01266944; iTF_01414305; iTF_00141890; iTF_00222594; iTF_00756739; iTF_00866083; iTF_00864711; iTF_00861965; iTF_00864047; iTF_00866769; iTF_00861242; iTF_01393635; iTF_01389543; iTF_01391284; iTF_00011232; iTF_00228036; iTF_00729412; iTF_01071076; iTF_01476996; iTF_00087269; iTF_00047078; iTF_01065638; iTF_01069736; iTF_01068363; iTF_01069042; iTF_01066327; iTF_01067678; iTF_01070430; iTF_01514886; iTF_00226663; iTF_00452647; iTF_00460903; iTF_01465383; iTF_01468929; iTF_01392871; iTF_01380057; iTF_01037095; iTF_00080168; iTF_00708584; iTF_01112713; iTF_00326448; iTF_00734680; iTF_01219160; iTF_01000648; iTF_01406632; iTF_01476330; iTF_01477696; iTF_01390409; iTF_00360281; iTF_00229418; iTF_00227340; iTF_00217813; iTF_00225306; iTF_01232458; iTF_01234412; iTF_01514223; iTF_01235090; iTF_01233725; iTF_01513544; iTF_01233068; iTF_00798672; iTF_00439570; iTF_01306580; iTF_01512890; iTF_00064555; iTF_00452011; iTF_00629195; iTF_01056147; iTF_01299362; iTF_01103656; iTF_00265804; iTF_00263597; iTF_01129424; iTF_00266545; iTF_01057747; iTF_01508948; iTF_01056989; iTF_01102909; iTF_00262750; iTF_00829600; iTF_01271307; iTF_01417771; iTF_00088908; iTF_00131372; iTF_00863340; iTF_01483948; iTF_01538060; iTF_00996429; iTF_01405865; iTF_00905496; iTF_00129852; iTF_01090061; iTF_00316878; iTF_00317535; iTF_00898862; iTF_01270597; iTF_00175151; iTF_00306351; iTF_00378127; iTF_00738447; iTF_00230096; iTF_00690256; iTF_00143944; iTF_00739144; iTF_01190454; iTF_00286426; iTF_01036290; iTF_00305699; iTF_01484707; iTF_00368870; iTF_01113513; iTF_01110214; iTF_01111860; iTF_01035502; iTF_01481592; iTF_01381405; iTF_00761041; iTF_00938098; iTF_01419058; iTF_00217139; iTF_00295347; iTF_01099315; iTF_00132692; iTF_00980244; iTF_01489492; iTF_00183350; iTF_00983030; iTF_00231383; iTF_00254423; iTF_00293815; iTF_00291630; iTF_01245303; iTF_00828856; iTF_00997114; iTF_01169242; iTF_01303546; iTF_01539675; iTF_00676092; iTF_01120284; iTF_01228444; iTF_00252157; iTF_00118078; iTF_00088114; iTF_00215774; iTF_00089663; iTF_00762623; iTF_01199487; iTF_01420991; iTF_01493663; iTF_00873155; iTF_01492963; iTF_01273863; iTF_00200873; iTF_00168592; iTF_00728723; iTF_00438165;
- 80% Identity
- iTF_00230096;