Basic Information

Gene Symbol
pnr
Assembly
GCA_963669185.1
Location
OY769907.1:13037438-13052441[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5 3.1e+03 -2.0 0.1 3 12 241 255 240 262 0.67
2 2 1.4e-16 2.9e-13 49.3 5.1 1 35 427 460 427 461 0.98

Sequence Information

Coding Sequence
atgtTCAATGTACCGACCAAATTTTACGAGCTTTGTCGTCTTTGTTTATCGTCGGACGGCTCAAAATTGCCGATATTCGACGATGAAGGCTTGCAGCGTAATTTTGCCGACAAGATACTGACGTGCCTGTCGATAGCGGTGAAAGATGGAGATTGTTTGCCACCGATCATCTGCCACCGTTGCGTGTACAAATTGGACGTACTGCACAATTTTCGCGAAGTATCGCGAAAATCTGACATTATACTCAAACAGTACCTGGACTGTGCCAAACAGTTGTCCGCACAGGACAACCAggACGAGTCTTTCTCCACTGCCAAAATAGCGGACGAGAGTTCAACGCAGTCTTTTCAACAATTAAACAAGACCCTGTTCAACGAGGATGTGAACTCGCAAGTTGGCATTAATCAAAACTTAATACCTCAAACGCAAACGGAACGAACAGACGTGTCAACGCCAGGTGAAGAGACAAGAACGGCGATGGAGCAACAGATGAGCAGCAGCGTAAAGTGCGAGCCAGAGGACGACACGTGCTCCAACAGCACGGATCCGGACAGATTGGAGATTGAGGATCGTGAAGCCGAGCAGGAGACCGATGGCGAGGAAAATGGCTACGATATGACTGTCAATAAACGCATCAAGCTTGAAAATAGTTATGAGAGCTCCAAGAGAAGTACATCAAACGCTGGTAGTCCCGTTAACAGAATGGACACACCCGAGAGCAATTGCTCCGATACTCACATAGATCAAGAAACGACAAAATTGTGGCAGGCACTTGCTAAcaaCAGGAGTCTGGAAATAACACGAACTAACGGTGACAAATTGAACAATGGATTTACCGGCGAGGCAACAAATTTACTGAGATCGTTGATAAATAATCGACAAATTGGTATAACCGCTGTTGACACCGGAAGAGTATCGCCGCAAATAAGATTTTACAGGGACACACAGGGTACGACGATCGAGCGCACAGTGCCGGATTGTTCGATACTTGGCAATCGAACAAATATGCCGTGTCTGGAAAGCaagAGTGCCTCGATGGACAGCAATCCTTCGAGTCCAGCGAGTATCGGTCGAAAGGAGACAAAGGGAAGACGAAAGCAGAGCTATCCGAGCAAAGCACCAACGAGCCCGGATCTCATGAATTATCAGCACGAATCGAGCGAGGAACAGGCACAAGATTTTACAGCATGGTCGAGCAAAATGAAGGGTAAAATTGACGATAACAAGCAGCATTATGATCAACATGGTGGCAATACGACGAAAAAAGTCGACATGTCTTGCACCAATTGTGGCACAATGACAACGACAATATGGCGACGAAACATGAAGGGAGAAATGGTCTGTAATGCTTGTGGGCTTTACTACAAACTTCACGGTGTTAACAGACCGGTTACCATGAGAAGGGACACGATACATACCCGTAGACGCCGACCAAAAGGTGAAAAGCCCACCCGGCACAGAAagaAAGACACTTCGCTATTGCCATCGCAGGCGGAGCAAATGGACGCAGAGAGTGCGGATATGCTAGCAGCATTGCGGCGTCAGATACAGCCCCATCTGATGATGGCAGCACTGACACCGCCACATTTGTCAAGCTCCTCTCATCCAACACCATCGGCAGCTCAGCTCAATTATTCCCTACCACTGTCGACATACATGATGTCACACGTGAGTACGCCGCAGACGTATTCGATAGATCTCGTAAGTCGCTTGACGCGTAACGCGTCAAGTGTCATTAGCAACTCGACAAACACGAGTCAAGTTGTAAACTTTGCGCAGCAAGCGAAGAACGAGACGAGGAACAATTCACGTAGCCGTCGTCCTTCCGACGAGGAACCGGATGACGGTGACGAGGAAAACATCTCGGACTTGCCCCTGAATCTCGTTGCAACCTCGCTATCGGAGGAGGCACactga
Protein Sequence
MFNVPTKFYELCRLCLSSDGSKLPIFDDEGLQRNFADKILTCLSIAVKDGDCLPPIICHRCVYKLDVLHNFREVSRKSDIILKQYLDCAKQLSAQDNQDESFSTAKIADESSTQSFQQLNKTLFNEDVNSQVGINQNLIPQTQTERTDVSTPGEETRTAMEQQMSSSVKCEPEDDTCSNSTDPDRLEIEDREAEQETDGEENGYDMTVNKRIKLENSYESSKRSTSNAGSPVNRMDTPESNCSDTHIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAVDTGRVSPQIRFYRDTQGTTIERTVPDCSILGNRTNMPCLESKSASMDSNPSSPASIGRKETKGRRKQSYPSKAPTSPDLMNYQHESSEEQAQDFTAWSSKMKGKIDDNKQHYDQHGGNTTKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKDTSLLPSQAEQMDAESADMLAALRRQIQPHLMMAALTPPHLSSSSHPTPSAAQLNYSLPLSTYMMSHVSTPQTYSIDLVSRLTRNASSVISNSTNTSQVVNFAQQAKNETRNNSRSRRPSDEEPDDGDEENISDLPLNLVATSLSEEAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2